RNA–Protein interactions for RNA: ENST00000515144.5

TRIO-222, Transcript of trio Rho guanine nucleotide exchange factor, human

TSL 1 (best)

Gene TRIO, Length 7,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIO-222	ENST00000515144	HOXB5	P09067	269 aa		13.24	□□□□□ -0.29
TRIO-222	ENST00000515144	YLPM1	P49750	1951 aa	Known RBP	13.24	□□□□□ -0.29
TRIO-222	ENST00000515144	CD300LB	A8K4G0	201 aa		13.23	□□□□□ -0.29
TRIO-222	ENST00000515144	INMT-MINDY4	F8WBC2	141 aa		13.23	□□□□□ -0.29
TRIO-222	ENST00000515144	PAN3	Q58A45	887 aa	Known RBP	13.23	□□□□□ -0.29
TRIO-222	ENST00000515144	ZNF766	Q5HY98	468 aa		13.23	□□□□□ -0.29
TRIO-222	ENST00000515144	GPR119	Q8TDV5	335 aa		13.23	□□□□□ -0.29
TRIO-222	ENST00000515144		V9GY05	133 aa		13.23	□□□□□ -0.29
TRIO-222	ENST00000515144	RAB3D	O95716	219 aa		13.23	□□□□□ -0.29
TRIO-222	ENST00000515144	CEACAM5	P06731	702 aa		13.23	□□□□□ -0.29
TRIO-222	ENST00000515144	COL9A1	P20849	921 aa		13.23	□□□□□ -0.29
TRIO-222	ENST00000515144	SYT11	Q9BT88	431 aa		13.23	□□□□□ -0.29
TRIO-222	ENST00000515144	EGLN1	Q9GZT9	426 aa		13.23	□□□□□ -0.29
TRIO-222	ENST00000515144	SPAAR	A0A1B0GVQ0	90 aa		13.23	□□□□□ -0.29
TRIO-222	ENST00000515144	QDPR	P09417	244 aa		13.23	□□□□□ -0.29
TRIO-222	ENST00000515144	CAPZB	P47756	277 aa		13.23	□□□□□ -0.29
TRIO-222	ENST00000515144	VEZF1	Q14119	521 aa		13.23	□□□□□ -0.29
TRIO-222	ENST00000515144	TCTN3	Q6NUS6	607 aa		13.23	□□□□□ -0.29
TRIO-222	ENST00000515144	PLPP6	Q8IY26	295 aa		13.23	□□□□□ -0.29
TRIO-222	ENST00000515144	FAM185A	Q8N0U4	392 aa		13.23	□□□□□ -0.29
TRIO-222	ENST00000515144	OR10X1	Q8NGY0	326 aa		13.23	□□□□□ -0.29
TRIO-222	ENST00000515144	TAAR8	Q969N4	342 aa		13.23	□□□□□ -0.29
TRIO-222	ENST00000515144	TIMD4	Q96H15	378 aa		13.23	□□□□□ -0.29
TRIO-222	ENST00000515144	BOD1	Q96IK1	185 aa		13.23	□□□□□ -0.29
TRIO-222	ENST00000515144	SEMA4C	Q9C0C4	833 aa		13.23	□□□□□ -0.29
TRIO-222	ENST00000515144	LTB	Q06643	244 aa		13.23	□□□□□ -0.29
TRIO-222	ENST00000515144	MFAP5	Q13361	173 aa		13.23	□□□□□ -0.29
TRIO-222	ENST00000515144	SULF2	Q8IWU5	870 aa		13.23	□□□□□ -0.29
TRIO-222	ENST00000515144	MAEL	Q96JY0	434 aa	Known RBP	13.23	□□□□□ -0.29
TRIO-222	ENST00000515144	FGF17	O60258	216 aa		13.23	□□□□□ -0.29
TRIO-222	ENST00000515144	GCA	P28676	217 aa		13.23	□□□□□ -0.29
TRIO-222	ENST00000515144	KIR2DL3	P43628	341 aa		13.23	□□□□□ -0.29
TRIO-222	ENST00000515144	CNIH2	Q6PI25	160 aa		13.23	□□□□□ -0.29
TRIO-222	ENST00000515144	KCTD20	Q7Z5Y7	419 aa		13.23	□□□□□ -0.29
TRIO-222	ENST00000515144	ZC3H10	Q96K80	434 aa	Known RBP	13.23	□□□□□ -0.29
TRIO-222	ENST00000515144	CHRNA9	Q9UGM1	479 aa		13.23	□□□□□ -0.29
TRIO-222	ENST00000515144	POLE	Q07864	2286 aa		13.23	□□□□□ -0.29
TRIO-222	ENST00000515144	MGAM	O43451	1857 aa		13.23	□□□□□ -0.29
TRIO-222	ENST00000515144	CYB5B	O43169	146 aa		13.23	□□□□□ -0.29
TRIO-222	ENST00000515144	FOLR1	P15328	257 aa		13.23	□□□□□ -0.29
TRIO-222	ENST00000515144	MAP2K3	P46734	347 aa		13.23	□□□□□ -0.29
TRIO-222	ENST00000515144	ACTB	P60709	375 aa		13.23	□□□□□ -0.29
TRIO-222	ENST00000515144	ACTG1	P63261	375 aa		13.23	□□□□□ -0.29
TRIO-222	ENST00000515144	C1orf140	Q5VVS0	124 aa		13.23	□□□□□ -0.29
TRIO-222	ENST00000515144	AGAP6	Q5VW22	663 aa		13.23	□□□□□ -0.29
TRIO-222	ENST00000515144		Q6ZNB5	142 aa		13.23	□□□□□ -0.29
TRIO-222	ENST00000515144	C11orf40	Q8WZ69	217 aa		13.23	□□□□□ -0.29
TRIO-222	ENST00000515144	SGPP1	Q9BX95	441 aa		13.23	□□□□□ -0.29
TRIO-222	ENST00000515144	GREB1L	Q9C091	1923 aa	Predicted RBP	13.23	□□□□□ -0.29
TRIO-222	ENST00000515144	METTL15	A6NJ78	407 aa		13.22	□□□□□ -0.29
TRIO-222	ENST00000515144	YES1	P07947	543 aa		13.22	□□□□□ -0.29
TRIO-222	ENST00000515144	CCDC71	Q8IV32	467 aa	Predicted RBP	13.22	□□□□□ -0.29
TRIO-222	ENST00000515144	BBS1	Q8NFJ9	593 aa		13.22	□□□□□ -0.29
TRIO-222	ENST00000515144	TMEM163	Q8TC26	289 aa		13.22	□□□□□ -0.29
TRIO-222	ENST00000515144	NT5C3B	Q969T7	300 aa		13.22	□□□□□ -0.29
TRIO-222	ENST00000515144	GALNT9	Q9HCQ5	603 aa		13.22	□□□□□ -0.29
TRIO-222	ENST00000515144	WSB2	Q9NYS7	404 aa	Predicted RBP	13.22	□□□□□ -0.29
TRIO-222	ENST00000515144	WNT16	Q9UBV4	365 aa		13.22	□□□□□ -0.29
TRIO-222	ENST00000515144	IGHV5-51	A0A0C4DH38	117 aa		13.22	□□□□□ -0.29
TRIO-222	ENST00000515144	PRKACA	P17612	351 aa		13.22	□□□□□ -0.29
TRIO-222	ENST00000515144	DPT	Q07507	201 aa		13.22	□□□□□ -0.29
TRIO-222	ENST00000515144	PLA1A	Q53H76	456 aa		13.22	□□□□□ -0.29
TRIO-222	ENST00000515144	GDF7	Q7Z4P5	450 aa		13.22	□□□□□ -0.29
TRIO-222	ENST00000515144	MSI2	Q96DH6	328 aa	Known RBP	13.22	□□□□□ -0.29
TRIO-222	ENST00000515144	PDF	Q9HBH1	243 aa		13.22	□□□□□ -0.29
TRIO-222	ENST00000515144	LYRM4	Q9HD34	91 aa		13.22	□□□□□ -0.29
TRIO-222	ENST00000515144	DAPP1	Q9UN19	280 aa		13.22	□□□□□ -0.29
TRIO-222	ENST00000515144	IGHV1OR15-9	A0A0B4J2B8	117 aa		13.22	□□□□□ -0.29
TRIO-222	ENST00000515144	MT-ND4	P03905	459 aa		13.22	□□□□□ -0.29
TRIO-222	ENST00000515144	SDHB	P21912	280 aa		13.22	□□□□□ -0.29
TRIO-222	ENST00000515144	RAB31	Q13636	194 aa		13.22	□□□□□ -0.29
TRIO-222	ENST00000515144	PROX2	Q3B8N5	592 aa		13.22	□□□□□ -0.29
TRIO-222	ENST00000515144	HEPHL1	Q6MZM0	1159 aa		13.22	□□□□□ -0.29
TRIO-222	ENST00000515144	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	13.22	□□□□□ -0.29
TRIO-222	ENST00000515144	RBM45	Q8IUH3	476 aa	Known RBP	13.22	□□□□□ -0.29
TRIO-222	ENST00000515144	MS4A15	Q8N5U1	240 aa		13.22	□□□□□ -0.29
TRIO-222	ENST00000515144	OR6F1	Q8NGZ6	308 aa		13.22	□□□□□ -0.29
TRIO-222	ENST00000515144	ZNF417	Q8TAU3	575 aa		13.22	□□□□□ -0.29
TRIO-222	ENST00000515144	INTS12	Q96CB8	462 aa	Known RBP	13.22	□□□□□ -0.29
TRIO-222	ENST00000515144	FAIM	Q9NVQ4	179 aa		13.22	□□□□□ -0.29
TRIO-222	ENST00000515144	ADAM29	Q9UKF5	820 aa		13.22	□□□□□ -0.29
TRIO-222	ENST00000515144	OR8U9	P0C7N5	309 aa		13.22	□□□□□ -0.29
TRIO-222	ENST00000515144	CDON	Q4KMG0	1287 aa		13.22	□□□□□ -0.29
TRIO-222	ENST00000515144	ZNF511	Q8NB15	262 aa		13.22	□□□□□ -0.29
TRIO-222	ENST00000515144	OR4N2	Q8NGD1	307 aa		13.22	□□□□□ -0.29
TRIO-222	ENST00000515144	OR56B2P	Q8NGI1	322 aa		13.22	□□□□□ -0.29
TRIO-222	ENST00000515144	OR6T1	Q8NGN1	323 aa		13.22	□□□□□ -0.29
TRIO-222	ENST00000515144	GNRHR2	Q96P88	292 aa		13.22	□□□□□ -0.29
TRIO-222	ENST00000515144	SULT4A1	Q9BR01	284 aa		13.22	□□□□□ -0.29
TRIO-222	ENST00000515144	DEGS1	O15121	323 aa		13.22	□□□□□ -0.29
TRIO-222	ENST00000515144	PLAG1	Q6DJT9	500 aa		13.22	□□□□□ -0.29
TRIO-222	ENST00000515144	MBOAT2	Q6ZWT7	520 aa		13.22	□□□□□ -0.29
TRIO-222	ENST00000515144	BRIX1	Q8TDN6	353 aa	Known RBP	13.22	□□□□□ -0.29
TRIO-222	ENST00000515144	RASD1	Q9Y272	281 aa		13.22	□□□□□ -0.29
TRIO-222	ENST00000515144	TEX51	A0A1B0GUA7	166 aa		13.22	□□□□□ -0.29
TRIO-222	ENST00000515144	TARM1	B6A8C7	271 aa		13.22	□□□□□ -0.29
TRIO-222	ENST00000515144	HSF1	Q00613	529 aa		13.22	□□□□□ -0.29
TRIO-222	ENST00000515144	ZDHHC16	Q969W1	377 aa		13.22	□□□□□ -0.29
TRIO-222	ENST00000515144	KCNK2	O95069	426 aa		13.21	□□□□□ -0.29
TRIO-222	ENST00000515144	TSPAN12	O95859	305 aa		13.21	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms