RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 FEN1P39748 380 aaKnown RBP3.1□□□□□ -1.91
PDLIM5-218ENST00000513341 MTNR1AP48039 350 aa3.1□□□□□ -1.91
PDLIM5-218ENST00000513341 SOX2P48431 317 aa3.1□□□□□ -1.91
PDLIM5-218ENST00000513341 ATP4BP51164 291 aa3.1□□□□□ -1.91
PDLIM5-218ENST00000513341 ZNF41P51814 821 aaPredicted RBP3.1□□□□□ -1.91
PDLIM5-218ENST00000513341 FAM3BP58499 235 aaPredicted RBP3.1□□□□□ -1.91
PDLIM5-218ENST00000513341 GPX6P59796 221 aa3.1□□□□□ -1.91
PDLIM5-218ENST00000513341 EGR4Q05215 589 aa3.1□□□□□ -1.91
PDLIM5-218ENST00000513341 SPOCK1Q08629 439 aa3.1□□□□□ -1.91
PDLIM5-218ENST00000513341 ZP4Q12836 540 aa3.1□□□□□ -1.91
PDLIM5-218ENST00000513341 SNX1Q13596 522 aa3.1□□□□□ -1.91
PDLIM5-218ENST00000513341 ALKBH1Q13686 389 aaKnown RBP3.1□□□□□ -1.91
PDLIM5-218ENST00000513341 TSNQ15631 228 aaKnown RBP3.1□□□□□ -1.91
PDLIM5-218ENST00000513341 C18orf21Q32NC0 220 aaPredicted RBP3.1□□□□□ -1.91
PDLIM5-218ENST00000513341 TMEM176BQ3YBM2 270 aaPredicted RBP3.1□□□□□ -1.91
PDLIM5-218ENST00000513341 SPANXN3Q5MJ09 141 aa3.1□□□□□ -1.91
PDLIM5-218ENST00000513341 CCNYL2Q5T2Q4 361 aa3.1□□□□□ -1.91
PDLIM5-218ENST00000513341 DCAF12L2Q5VW00 463 aa3.1□□□□□ -1.91
PDLIM5-218ENST00000513341 LIPMQ5VYY2 423 aa3.1□□□□□ -1.91
PDLIM5-218ENST00000513341 OLFML2AQ68BL7 652 aa3.1□□□□□ -1.91
PDLIM5-218ENST00000513341 METTL2BQ6P1Q9 378 aaKnown RBP3.1□□□□□ -1.91
PDLIM5-218ENST00000513341 LEG1Q6P5S2 330 aa3.1□□□□□ -1.91
PDLIM5-218ENST00000513341 NPSR1Q6W5P4 371 aa3.1□□□□□ -1.91
PDLIM5-218ENST00000513341 IKBIPQ70UQ0 350 aa3.1□□□□□ -1.91
PDLIM5-218ENST00000513341 SPATA19Q7Z5L4 167 aa3.1□□□□□ -1.91
PDLIM5-218ENST00000513341 PRUNE1Q86TP1 453 aa3.1□□□□□ -1.91
PDLIM5-218ENST00000513341 UBE2J2Q8N2K1 259 aa3.1□□□□□ -1.91
PDLIM5-218ENST00000513341 RIBC1Q8N443 379 aaPredicted RBP3.1□□□□□ -1.91
PDLIM5-218ENST00000513341 SIGLECL1Q8N7X8 197 aa3.1□□□□□ -1.91
PDLIM5-218ENST00000513341 NUP37Q8NFH4 326 aa3.1□□□□□ -1.91
PDLIM5-218ENST00000513341 OR4N2Q8NGD1 307 aa3.1□□□□□ -1.91
PDLIM5-218ENST00000513341 MRAPQ8TCY5 172 aa3.1□□□□□ -1.91
PDLIM5-218ENST00000513341 C1orf54Q8WWF1 131 aa3.1□□□□□ -1.91
PDLIM5-218ENST00000513341 ZNF75CPQ92670 426 aaPredicted RBP3.1□□□□□ -1.91
PDLIM5-218ENST00000513341 APH1AQ96BI3 265 aa3.1□□□□□ -1.91
PDLIM5-218ENST00000513341 EFHD2Q96C19 240 aaPredicted RBP3.1□□□□□ -1.91
PDLIM5-218ENST00000513341 RAB39BQ96DA2 213 aa3.1□□□□□ -1.91
PDLIM5-218ENST00000513341 CNRIP1Q96F85 164 aaPredicted RBP3.1□□□□□ -1.91
PDLIM5-218ENST00000513341 MED30Q96HR3 178 aa3.1□□□□□ -1.91
PDLIM5-218ENST00000513341 ZNF317Q96PQ6 595 aaPredicted RBP3.1□□□□□ -1.91
PDLIM5-218ENST00000513341 MTERF1Q99551 399 aaKnown RBP3.1□□□□□ -1.91
PDLIM5-218ENST00000513341 KCNS3Q9BQ31 491 aa3.1□□□□□ -1.91
PDLIM5-218ENST00000513341 KATNB1Q9BVA0 655 aa3.1□□□□□ -1.91
PDLIM5-218ENST00000513341 ZNF416Q9BWM5 594 aa3.1□□□□□ -1.91
PDLIM5-218ENST00000513341 RTN4RQ9BZR6 473 aa3.1□□□□□ -1.91
PDLIM5-218ENST00000513341 DERL2Q9GZP9 239 aa3.1□□□□□ -1.91
PDLIM5-218ENST00000513341 Q9N2J8 555 aa3.1□□□□□ -1.91
PDLIM5-218ENST00000513341 SLC17A5Q9NRA2 495 aa3.1□□□□□ -1.91
PDLIM5-218ENST00000513341 NMRK1Q9NWW6 199 aa3.1□□□□□ -1.91
PDLIM5-218ENST00000513341 TREM2Q9NZC2 230 aa3.1□□□□□ -1.91
PDLIM5-218ENST00000513341 EMC3Q9P0I2 261 aa3.1□□□□□ -1.91
PDLIM5-218ENST00000513341 IFNKQ9P0W0 207 aa3.1□□□□□ -1.91
PDLIM5-218ENST00000513341 NUP50Q9UKX7 468 aa3.1□□□□□ -1.91
PDLIM5-218ENST00000513341 ACOT9Q9Y305 439 aa3.1□□□□□ -1.91
PDLIM5-218ENST00000513341 RYR2Q92736 4967 aa3.09□□□□□ -1.91
PDLIM5-218ENST00000513341 LOC100653049A0A140TA62 436 aa3.09□□□□□ -1.91
PDLIM5-218ENST00000513341 A0A1B0GVY2 172 aa3.09□□□□□ -1.91
PDLIM5-218ENST00000513341 A0A1W2PQD3 144 aa3.09□□□□□ -1.91
PDLIM5-218ENST00000513341 A0A1W2PRB8 838 aa3.09□□□□□ -1.91
PDLIM5-218ENST00000513341 TMEM129A0AVI4 362 aa3.09□□□□□ -1.91
PDLIM5-218ENST00000513341 DPPA5A6NC42 116 aa3.09□□□□□ -1.91
PDLIM5-218ENST00000513341 NCF1BA6NI72 391 aaPredicted RBP3.09□□□□□ -1.91
PDLIM5-218ENST00000513341 AGAP5A6NIR3 686 aa3.09□□□□□ -1.91
PDLIM5-218ENST00000513341 C17orf51A8MQB3 221 aa3.09□□□□□ -1.91
PDLIM5-218ENST00000513341 NCF1CA8MVU1 366 aaPredicted RBP3.09□□□□□ -1.91
PDLIM5-218ENST00000513341 hCG_2039718K7EN88 272 aa3.09□□□□□ -1.91
PDLIM5-218ENST00000513341 PLXNB1O43157 2135 aa3.09□□□□□ -1.91
PDLIM5-218ENST00000513341 SYNGR3O43761 229 aa3.09□□□□□ -1.91
PDLIM5-218ENST00000513341 EFNA2O43921 213 aa3.09□□□□□ -1.91
PDLIM5-218ENST00000513341 MRPL33O75394 65 aaKnown RBP3.09□□□□□ -1.91
PDLIM5-218ENST00000513341 ERLIN1O75477 346 aa3.09□□□□□ -1.91
PDLIM5-218ENST00000513341 KRT34O76011 436 aa3.09□□□□□ -1.91
PDLIM5-218ENST00000513341 CLPXO76031 633 aa3.09□□□□□ -1.91
PDLIM5-218ENST00000513341 IPO7O95373 1038 aaKnown RBP3.09□□□□□ -1.91
PDLIM5-218ENST00000513341 HSPA4LO95757 839 aa3.09□□□□□ -1.91
PDLIM5-218ENST00000513341 MBD3O95983 291 aa3.09□□□□□ -1.91
PDLIM5-218ENST00000513341 OPN1LWP04000 364 aa3.09□□□□□ -1.91
PDLIM5-218ENST00000513341 CRYBA1P05813 215 aa3.09□□□□□ -1.91
PDLIM5-218ENST00000513341 PPIAL4GP0DN37 164 aa3.09□□□□□ -1.91
PDLIM5-218ENST00000513341 NCF1P14598 390 aaPredicted RBP3.09□□□□□ -1.91
PDLIM5-218ENST00000513341 SELEP16581 610 aa3.09□□□□□ -1.91
PDLIM5-218ENST00000513341 COL8A2P25067 703 aa3.09□□□□□ -1.91
PDLIM5-218ENST00000513341 RPS6KA3P51812 740 aa3.09□□□□□ -1.91
PDLIM5-218ENST00000513341 MAPK12P53778 367 aa3.09□□□□□ -1.91
PDLIM5-218ENST00000513341 BPIFB3P59826 476 aa3.09□□□□□ -1.91
PDLIM5-218ENST00000513341 VAMP2P63027 116 aa3.09□□□□□ -1.91
PDLIM5-218ENST00000513341 CSNK2A1P68400 391 aaPredicted RBP3.09□□□□□ -1.91
PDLIM5-218ENST00000513341 IL1RL1Q01638 556 aa3.09□□□□□ -1.91
PDLIM5-218ENST00000513341 STX5Q13190 355 aa3.09□□□□□ -1.91
PDLIM5-218ENST00000513341 TBX2Q13207 712 aaPredicted RBP3.09□□□□□ -1.91
PDLIM5-218ENST00000513341 DDX39BQ13838 428 aaKnown RBP3.09□□□□□ -1.91
PDLIM5-218ENST00000513341 FRG1Q14331 258 aaKnown RBP3.09□□□□□ -1.91
PDLIM5-218ENST00000513341 CRYMQ14894 314 aa3.09□□□□□ -1.91
PDLIM5-218ENST00000513341 SLC9A3R2Q15599 337 aa3.09□□□□□ -1.91
PDLIM5-218ENST00000513341 FAM189A2Q15884 450 aa3.09□□□□□ -1.91
PDLIM5-218ENST00000513341 PLPPR5Q32ZL2 321 aa3.09□□□□□ -1.91
PDLIM5-218ENST00000513341 RUNDC3AQ59EK9 446 aa3.09□□□□□ -1.91
PDLIM5-218ENST00000513341 ZNF311Q5JNZ3 666 aa3.09□□□□□ -1.91
PDLIM5-218ENST00000513341 ELFN2Q5R3F8 820 aa3.09□□□□□ -1.91
PDLIM5-218ENST00000513341 SEL1L2Q5TEA6 688 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms