RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 SNAPC3Q92966 411 aa4.63□□□□□ -1.67
GYPB-212ENST00000511198 TBC1D20Q96BZ9 403 aa4.63□□□□□ -1.67
GYPB-212ENST00000511198 FBXL8Q96CD0 374 aa4.63□□□□□ -1.67
GYPB-212ENST00000511198 AURKBQ96GD4 344 aaPredicted RBP4.63□□□□□ -1.67
GYPB-212ENST00000511198 PPP1R36Q96LQ0 422 aa4.63□□□□□ -1.67
GYPB-212ENST00000511198 C10orf90Q96M02 699 aa4.63□□□□□ -1.67
GYPB-212ENST00000511198 TSGA13Q96PP4 275 aa4.63□□□□□ -1.67
GYPB-212ENST00000511198 CITED1Q99966 193 aa4.63□□□□□ -1.67
GYPB-212ENST00000511198 VN1R1Q9GZP7 353 aa4.63□□□□□ -1.67
GYPB-212ENST00000511198 EXO5Q9H790 373 aa4.63□□□□□ -1.67
GYPB-212ENST00000511198 C14orf105Q9NVL8 296 aa4.63□□□□□ -1.67
GYPB-212ENST00000511198 USE1Q9NZ43 259 aa4.63□□□□□ -1.67
GYPB-212ENST00000511198 CCDC167Q9P0B6 97 aa4.63□□□□□ -1.67
GYPB-212ENST00000511198 AAR2Q9Y312 384 aaKnown RBP4.63□□□□□ -1.67
GYPB-212ENST00000511198 IFT52Q9Y366 437 aa4.63□□□□□ -1.67
GYPB-212ENST00000511198 SNX5Q9Y5X3 404 aa4.63□□□□□ -1.67
GYPB-212ENST00000511198 A0A1W2PP18 115 aa4.62□□□□□ -1.67
GYPB-212ENST00000511198 hDV102S1A0JD36 115 aa4.62□□□□□ -1.67
GYPB-212ENST00000511198 FXYD1O00168 92 aa4.62□□□□□ -1.67
GYPB-212ENST00000511198 NR5A2O00482 541 aa4.62□□□□□ -1.67
GYPB-212ENST00000511198 LSM1O15116 133 aaKnown RBP4.62□□□□□ -1.67
GYPB-212ENST00000511198 UGT2B11O75310 529 aa4.62□□□□□ -1.67
GYPB-212ENST00000511198 GMNNO75496 209 aa4.62□□□□□ -1.67
GYPB-212ENST00000511198 EEDO75530 441 aaKnown RBP4.62□□□□□ -1.67
GYPB-212ENST00000511198 ANXA9O76027 345 aa4.62□□□□□ -1.67
GYPB-212ENST00000511198 FGF4P08620 206 aa4.62□□□□□ -1.67
GYPB-212ENST00000511198 CCDC159P0C7I6 412 aa4.62□□□□□ -1.67
GYPB-212ENST00000511198 LBPP18428 481 aa4.62□□□□□ -1.67
GYPB-212ENST00000511198 IMPDH1P20839 514 aa4.62□□□□□ -1.67
GYPB-212ENST00000511198 MAGP20916 626 aa4.62□□□□□ -1.67
GYPB-212ENST00000511198 TCEA1P23193 301 aaKnown RBP4.62□□□□□ -1.67
GYPB-212ENST00000511198 CRHBPP24387 322 aa4.62□□□□□ -1.67
GYPB-212ENST00000511198 EEF1B2P24534 225 aaKnown RBP4.62□□□□□ -1.67
GYPB-212ENST00000511198 NMBRP28336 390 aa4.62□□□□□ -1.67
GYPB-212ENST00000511198 IL12AP29459 219 aa4.62□□□□□ -1.67
GYPB-212ENST00000511198 CD40LGP29965 261 aa4.62□□□□□ -1.67
GYPB-212ENST00000511198 PBLDP30039 288 aaPredicted RBP4.62□□□□□ -1.67
GYPB-212ENST00000511198 TLX1P31314 330 aaPredicted RBP4.62□□□□□ -1.67
GYPB-212ENST00000511198 IL2RGP31785 369 aa4.62□□□□□ -1.67
GYPB-212ENST00000511198 CD79BP40259 229 aa4.62□□□□□ -1.67
GYPB-212ENST00000511198 GSK3BP49841 420 aa4.62□□□□□ -1.67
GYPB-212ENST00000511198 PLA2G16P53816 162 aa4.62□□□□□ -1.67
GYPB-212ENST00000511198 GEMP55040 296 aa4.62□□□□□ -1.67
GYPB-212ENST00000511198 TPI1P60174 286 aa4.62□□□□□ -1.67
GYPB-212ENST00000511198 MAXP61244 160 aa4.62□□□□□ -1.67
GYPB-212ENST00000511198 MAT1AQ00266 395 aaKnown RBP4.62□□□□□ -1.67
GYPB-212ENST00000511198 ARL16Q0P5N6 197 aa4.62□□□□□ -1.67
GYPB-212ENST00000511198 PRKG2Q13237 762 aa4.62□□□□□ -1.67
GYPB-212ENST00000511198 RCAN2Q14206 197 aa4.62□□□□□ -1.67
GYPB-212ENST00000511198 CYP51A1Q16850 503 aa4.62□□□□□ -1.67
GYPB-212ENST00000511198 TYSND1Q2T9J0 566 aa4.62□□□□□ -1.67
GYPB-212ENST00000511198 RFX4Q33E94 735 aa4.62□□□□□ -1.67
GYPB-212ENST00000511198 ESCO2Q56NI9 601 aa4.62□□□□□ -1.67
GYPB-212ENST00000511198 TCTE1Q5JU00 501 aa4.62□□□□□ -1.67
GYPB-212ENST00000511198 XAF1Q6GPH4 301 aa4.62□□□□□ -1.67
GYPB-212ENST00000511198 FRMPD2BQ6IN97 320 aa4.62□□□□□ -1.67
GYPB-212ENST00000511198 CES3Q6UWW8 571 aa4.62□□□□□ -1.67
GYPB-212ENST00000511198 OFCC1Q8IZS5 231 aa4.62□□□□□ -1.67
GYPB-212ENST00000511198 TTC29Q8NA56 475 aaPredicted RBP4.62□□□□□ -1.67
GYPB-212ENST00000511198 ZNF555Q8NEP9 628 aa4.62□□□□□ -1.67
GYPB-212ENST00000511198 HEXDCQ8WVB3 486 aa4.62□□□□□ -1.67
GYPB-212ENST00000511198 METTL21AQ8WXB1 218 aa4.62□□□□□ -1.67
GYPB-212ENST00000511198 NXNL1Q96CM4 212 aa4.62□□□□□ -1.67
GYPB-212ENST00000511198 LRRC58Q96CX6 371 aa4.62□□□□□ -1.67
GYPB-212ENST00000511198 COL21A1Q96P44 957 aa4.62□□□□□ -1.67
GYPB-212ENST00000511198 KCTD14Q9BQ13 255 aaPredicted RBP4.62□□□□□ -1.67
GYPB-212ENST00000511198 SFXN3Q9BWM7 321 aa4.62□□□□□ -1.67
GYPB-212ENST00000511198 NAA50Q9GZZ1 169 aaKnown RBP4.62□□□□□ -1.67
GYPB-212ENST00000511198 EHD1Q9H4M9 534 aa4.62□□□□□ -1.67
GYPB-212ENST00000511198 ARMC7Q9H6L4 198 aa4.62□□□□□ -1.67
GYPB-212ENST00000511198 IL1RL2Q9HB29 575 aa4.62□□□□□ -1.67
GYPB-212ENST00000511198 POPDC3Q9HBV1 291 aa4.62□□□□□ -1.67
GYPB-212ENST00000511198 MKKSQ9NPJ1 570 aaPredicted RBP4.62□□□□□ -1.67
GYPB-212ENST00000511198 SDR39U1Q9NRG7 319 aaPredicted RBP4.62□□□□□ -1.67
GYPB-212ENST00000511198 PAK1IP1Q9NWT1 392 aaPredicted RBP4.62□□□□□ -1.67
GYPB-212ENST00000511198 NPAP1Q9NZP6 1156 aa4.62□□□□□ -1.67
GYPB-212ENST00000511198 LEF1Q9UJU2 399 aaPredicted RBP4.62□□□□□ -1.67
GYPB-212ENST00000511198 AP3M1Q9Y2T2 418 aa4.62□□□□□ -1.67
GYPB-212ENST00000511198 A3GALT2U3KPV4 340 aa4.62□□□□□ -1.67
GYPB-212ENST00000511198 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.61□□□□□ -1.67
GYPB-212ENST00000511198 OR2AG2A6NM03 316 aa4.61□□□□□ -1.67
GYPB-212ENST00000511198 ZNF99A8MXY4 864 aaPredicted RBP4.61□□□□□ -1.67
GYPB-212ENST00000511198 CENPBD1B2RD01 187 aa4.61□□□□□ -1.67
GYPB-212ENST00000511198 KCNK1O00180 336 aa4.61□□□□□ -1.67
GYPB-212ENST00000511198 IFRD1O00458 451 aaPredicted RBP4.61□□□□□ -1.67
GYPB-212ENST00000511198 BCAS1O75363 584 aaPredicted RBP4.61□□□□□ -1.67
GYPB-212ENST00000511198 TNFSF13O75888 250 aa4.61□□□□□ -1.67
GYPB-212ENST00000511198 LY6HO94772 140 aa4.61□□□□□ -1.67
GYPB-212ENST00000511198 KDM4BO94953 1096 aa4.61□□□□□ -1.67
GYPB-212ENST00000511198 WISP3O95389 354 aaPredicted RBP4.61□□□□□ -1.67
GYPB-212ENST00000511198 PTTG1O95997 202 aa4.61□□□□□ -1.67
GYPB-212ENST00000511198 ERCC2P18074 760 aa4.61□□□□□ -1.67
GYPB-212ENST00000511198 SLC1A2P43004 574 aa4.61□□□□□ -1.67
GYPB-212ENST00000511198 TRPC1P48995 793 aa4.61□□□□□ -1.67
GYPB-212ENST00000511198 PPP5CP53041 499 aa4.61□□□□□ -1.67
GYPB-212ENST00000511198 RAD23AP54725 363 aa4.61□□□□□ -1.67
GYPB-212ENST00000511198 TPD52P55327 224 aaPredicted RBP4.61□□□□□ -1.67
GYPB-212ENST00000511198 SLC26A5P58743 744 aa4.61□□□□□ -1.67
GYPB-212ENST00000511198 TAS2R39P59534 338 aa4.61□□□□□ -1.67
GYPB-212ENST00000511198 HERVK_113P63132 956 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms