RNA–Protein interactions for RNA: ENST00000511153.5

PROM1-211, Transcript of prominin 1, humanhuman

TSL 1 (best)

Gene PROM1, Length 1,595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-211ENST00000511153 Q96M85 177 aa4.79□□□□□ -1.64
PROM1-211ENST00000511153 HS6ST2Q96MM7 605 aa4.79□□□□□ -1.64
PROM1-211ENST00000511153 ALKBH3Q96Q83 286 aaPredicted RBP4.79□□□□□ -1.64
PROM1-211ENST00000511153 DMRTA2Q96SC8 542 aa4.79□□□□□ -1.64
PROM1-211ENST00000511153 SLC29A1Q99808 456 aa4.79□□□□□ -1.64
PROM1-211ENST00000511153 PSD2Q9BQI7 771 aa4.79□□□□□ -1.64
PROM1-211ENST00000511153 ZNF426Q9BUY5 554 aa4.79□□□□□ -1.64
PROM1-211ENST00000511153 KATNB1Q9BVA0 655 aa4.79□□□□□ -1.64
PROM1-211ENST00000511153 IFT27Q9BW83 186 aa4.79□□□□□ -1.64
PROM1-211ENST00000511153 POLDIP3Q9BY77 421 aaKnown RBP4.79□□□□□ -1.64
PROM1-211ENST00000511153 KLHL4Q9C0H6 718 aa4.79□□□□□ -1.64
PROM1-211ENST00000511153 YY1AP1Q9H869 796 aa4.79□□□□□ -1.64
PROM1-211ENST00000511153 HHATLQ9HCP6 504 aa4.79□□□□□ -1.64
PROM1-211ENST00000511153 TBC1D23Q9NUY8 699 aa4.79□□□□□ -1.64
PROM1-211ENST00000511153 B3GAT1Q9P2W7 334 aa4.79□□□□□ -1.64
PROM1-211ENST00000511153 AASSQ9UDR5 926 aa4.79□□□□□ -1.64
PROM1-211ENST00000511153 ING1Q9UK53 422 aaPredicted RBP4.79□□□□□ -1.64
PROM1-211ENST00000511153 NOSIPQ9Y314 301 aaKnown RBP4.79□□□□□ -1.64
PROM1-211ENST00000511153 UTP20O75691 2785 aaKnown RBP4.79□□□□□ -1.64
PROM1-211ENST00000511153 DOPEY2Q9Y3R5 2298 aa4.79□□□□□ -1.64
PROM1-211ENST00000511153 MBD3L4A6NDZ8 208 aaPredicted RBP4.78□□□□□ -1.64
PROM1-211ENST00000511153 MBD3L3A6NE82 208 aaPredicted RBP4.78□□□□□ -1.64
PROM1-211ENST00000511153 MBD3L5A6NJ08 208 aaPredicted RBP4.78□□□□□ -1.64
PROM1-211ENST00000511153 CD8B2A6NJW9 211 aa4.78□□□□□ -1.64
PROM1-211ENST00000511153 AQP7P3A6NL99 342 aa4.78□□□□□ -1.64
PROM1-211ENST00000511153 ZNF716A6NP11 495 aa4.78□□□□□ -1.64
PROM1-211ENST00000511153 E9PLN8 166 aa4.78□□□□□ -1.64
PROM1-211ENST00000511153 C19orf84I3L1E1 186 aa4.78□□□□□ -1.64
PROM1-211ENST00000511153 EI24O14681 340 aa4.78□□□□□ -1.64
PROM1-211ENST00000511153 ARHGEF9O43307 516 aa4.78□□□□□ -1.64
PROM1-211ENST00000511153 TRAF3IP2O43734 574 aaPredicted RBP4.78□□□□□ -1.64
PROM1-211ENST00000511153 OR2T1O43869 369 aa4.78□□□□□ -1.64
PROM1-211ENST00000511153 TNFSF13O75888 250 aa4.78□□□□□ -1.64
PROM1-211ENST00000511153 LYZL6O75951 148 aa4.78□□□□□ -1.64
PROM1-211ENST00000511153 KRT33AO76009 404 aa4.78□□□□□ -1.64
PROM1-211ENST00000511153 ASAH2BP0C7U1 165 aa4.78□□□□□ -1.64
PROM1-211ENST00000511153 THRBP10828 461 aa4.78□□□□□ -1.64
PROM1-211ENST00000511153 EPHA2P29317 976 aa4.78□□□□□ -1.64
PROM1-211ENST00000511153 UQCRC1P31930 480 aa4.78□□□□□ -1.64
PROM1-211ENST00000511153 ACVR1BP36896 505 aa4.78□□□□□ -1.64
PROM1-211ENST00000511153 CENPAP49450 140 aa4.78□□□□□ -1.64
PROM1-211ENST00000511153 DAPP51397 102 aa4.78□□□□□ -1.64
PROM1-211ENST00000511153 TUBA1BP68363 451 aa4.78□□□□□ -1.64
PROM1-211ENST00000511153 TUBA4AP68366 448 aa4.78□□□□□ -1.64
PROM1-211ENST00000511153 FMODQ06828 376 aa4.78□□□□□ -1.64
PROM1-211ENST00000511153 FAPQ12884 760 aa4.78□□□□□ -1.64
PROM1-211ENST00000511153 FHL1Q13642 323 aa4.78□□□□□ -1.64
PROM1-211ENST00000511153 SLC17A1Q14916 467 aa4.78□□□□□ -1.64
PROM1-211ENST00000511153 ACKR1Q16570 336 aa4.78□□□□□ -1.64
PROM1-211ENST00000511153 SLC36A3Q495N2 470 aa4.78□□□□□ -1.64
PROM1-211ENST00000511153 ZBED5Q49AG3 693 aa4.78□□□□□ -1.64
PROM1-211ENST00000511153 ALG10Q5BKT4 473 aa4.78□□□□□ -1.64
PROM1-211ENST00000511153 ABLIM2Q6H8Q1 611 aa4.78□□□□□ -1.64
PROM1-211ENST00000511153 ZNF770Q6IQ21 691 aaPredicted RBP4.78□□□□□ -1.64
PROM1-211ENST00000511153 PAQR6Q6TCH4 344 aa4.78□□□□□ -1.64
PROM1-211ENST00000511153 CREB3L2Q70SY1 520 aa4.78□□□□□ -1.64
PROM1-211ENST00000511153 TUBA1AQ71U36 451 aa4.78□□□□□ -1.64
PROM1-211ENST00000511153 SLC35D2Q76EJ3 337 aa4.78□□□□□ -1.64
PROM1-211ENST00000511153 LINGO2Q7L985 606 aa4.78□□□□□ -1.64
PROM1-211ENST00000511153 PQLC1Q8N2U9 271 aa4.78□□□□□ -1.64
PROM1-211ENST00000511153 ZIC4Q8N9L1 334 aa4.78□□□□□ -1.64
PROM1-211ENST00000511153 CYB561A3Q8NBI2 242 aa4.78□□□□□ -1.64
PROM1-211ENST00000511153 OR51L1Q8NGJ5 315 aa4.78□□□□□ -1.64
PROM1-211ENST00000511153 OR4K13Q8NH42 304 aa4.78□□□□□ -1.64
PROM1-211ENST00000511153 MBD3L2Q8NHZ7 208 aaPredicted RBP4.78□□□□□ -1.64
PROM1-211ENST00000511153 RNF128Q8TEB7 428 aa4.78□□□□□ -1.64
PROM1-211ENST00000511153 ITLN2Q8WWU7 325 aaPredicted RBP4.78□□□□□ -1.64
PROM1-211ENST00000511153 STARD4Q96DR4 205 aa4.78□□□□□ -1.64
PROM1-211ENST00000511153 CENPNQ96H22 339 aaPredicted RBP4.78□□□□□ -1.64
PROM1-211ENST00000511153 ZC3HAV1LQ96H79 300 aaKnown RBP4.78□□□□□ -1.64
PROM1-211ENST00000511153 OXGR1Q96P68 337 aa4.78□□□□□ -1.64
PROM1-211ENST00000511153 ERMAPQ96PL5 475 aaPredicted RBP4.78□□□□□ -1.64
PROM1-211ENST00000511153 TSPAN32Q96QS1 320 aa4.78□□□□□ -1.64
PROM1-211ENST00000511153 VKORC1Q9BQB6 163 aa4.78□□□□□ -1.64
PROM1-211ENST00000511153 TSSK6Q9BXA6 273 aa4.78□□□□□ -1.64
PROM1-211ENST00000511153 C1QTNF6Q9BXI9 259 aa4.78□□□□□ -1.64
PROM1-211ENST00000511153 TMPRSS13Q9BYE2 586 aa4.78□□□□□ -1.64
PROM1-211ENST00000511153 MRPL18Q9H0U6 180 aaKnown RBP4.78□□□□□ -1.64
PROM1-211ENST00000511153 POLR2J3Q9H1A7 115 aaKnown RBP4.78□□□□□ -1.64
PROM1-211ENST00000511153 OR52D1Q9H346 318 aa4.78□□□□□ -1.64
PROM1-211ENST00000511153 EVA1AQ9H8M9 152 aa4.78□□□□□ -1.64
PROM1-211ENST00000511153 MED20Q9H944 212 aa4.78□□□□□ -1.64
PROM1-211ENST00000511153 FKRPQ9H9S5 495 aa4.78□□□□□ -1.64
PROM1-211ENST00000511153 RNF122Q9H9V4 155 aa4.78□□□□□ -1.64
PROM1-211ENST00000511153 C12orf10Q9HB07 376 aa4.78□□□□□ -1.64
PROM1-211ENST00000511153 INIPQ9NRY2 104 aa4.78□□□□□ -1.64
PROM1-211ENST00000511153 ZNF229Q9UJW7 825 aa4.78□□□□□ -1.64
PROM1-211ENST00000511153 SLC5A6Q9Y289 635 aa4.78□□□□□ -1.64
PROM1-211ENST00000511153 TRAPPC4Q9Y296 219 aa4.78□□□□□ -1.64
PROM1-211ENST00000511153 EMC9Q9Y3B6 208 aa4.78□□□□□ -1.64
PROM1-211ENST00000511153 FLVCR1Q9Y5Y0 555 aa4.78□□□□□ -1.64
PROM1-211ENST00000511153 MYO18BQ8IUG5 2567 aa4.78□□□□□ -1.64
PROM1-211ENST00000511153 FLNCQ14315 2725 aa4.78□□□□□ -1.64
PROM1-211ENST00000511153 IGKV1D-43A0A0B4J1Z2 117 aa4.78□□□□□ -1.64
PROM1-211ENST00000511153 A0A1B0GUH1 482 aa4.78□□□□□ -1.64
PROM1-211ENST00000511153 FAM183AA6NL82 134 aa4.78□□□□□ -1.64
PROM1-211ENST00000511153 ZNF726A6NNF4 738 aa4.78□□□□□ -1.64
PROM1-211ENST00000511153 EIF1BO60739 113 aaKnown RBP4.78□□□□□ -1.64
PROM1-211ENST00000511153 PTP4A3O75365 173 aa4.78□□□□□ -1.64
PROM1-211ENST00000511153 MRPL33O75394 65 aaKnown RBP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms