RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 SIRPB1O00241 398 aa6.69□□□□□ -1.34
PDGFRA-206ENST00000508170 UBDO15205 165 aa6.69□□□□□ -1.34
PDGFRA-206ENST00000508170 CHP2O43745 196 aa6.69□□□□□ -1.34
PDGFRA-206ENST00000508170 XPNPEP2O43895 674 aa6.69□□□□□ -1.34
PDGFRA-206ENST00000508170 RAD1O60671 282 aa6.69□□□□□ -1.34
PDGFRA-206ENST00000508170 STK17BO94768 372 aa6.69□□□□□ -1.34
PDGFRA-206ENST00000508170 EML2O95834 649 aa6.69□□□□□ -1.34
PDGFRA-206ENST00000508170 BMP3P12645 472 aa6.69□□□□□ -1.34
PDGFRA-206ENST00000508170 CSNK2A2P19784 350 aaPredicted RBP6.69□□□□□ -1.34
PDGFRA-206ENST00000508170 AADACP22760 399 aa6.69□□□□□ -1.34
PDGFRA-206ENST00000508170 DUTP33316 252 aaKnown RBP6.69□□□□□ -1.34
PDGFRA-206ENST00000508170 CEACAM6P40199 344 aa6.69□□□□□ -1.34
PDGFRA-206ENST00000508170 CYP2J2P51589 502 aa6.69□□□□□ -1.34
PDGFRA-206ENST00000508170 FUT6P51993 359 aa6.69□□□□□ -1.34
PDGFRA-206ENST00000508170 TPTEP56180 551 aa6.69□□□□□ -1.34
PDGFRA-206ENST00000508170 NAA20P61599 178 aa6.69□□□□□ -1.34
PDGFRA-206ENST00000508170 HMGCS1Q01581 520 aa6.69□□□□□ -1.34
PDGFRA-206ENST00000508170 TRAF3Q13114 568 aa6.69□□□□□ -1.34
PDGFRA-206ENST00000508170 SKP2Q13309 424 aa6.69□□□□□ -1.34
PDGFRA-206ENST00000508170 CCDC6Q16204 474 aa6.69□□□□□ -1.34
PDGFRA-206ENST00000508170 ACSF3Q4G176 576 aaPredicted RBP6.69□□□□□ -1.34
PDGFRA-206ENST00000508170 RESP18Q5W5W9 173 aa6.69□□□□□ -1.34
PDGFRA-206ENST00000508170 NIPAL1Q6NVV3 410 aa6.69□□□□□ -1.34
PDGFRA-206ENST00000508170 ASCL5Q7RTU5 278 aa6.69□□□□□ -1.34
PDGFRA-206ENST00000508170 THOC6Q86W42 341 aaKnown RBP6.69□□□□□ -1.34
PDGFRA-206ENST00000508170 OR6V1Q8N148 313 aa6.69□□□□□ -1.34
PDGFRA-206ENST00000508170 CLDN22Q8N7P3 220 aa6.69□□□□□ -1.34
PDGFRA-206ENST00000508170 LINC01356Q8N9X3 169 aa6.69□□□□□ -1.34
PDGFRA-206ENST00000508170 ZNF548Q8NEK5 533 aaPredicted RBP6.69□□□□□ -1.34
PDGFRA-206ENST00000508170 OR2T11Q8NH01 316 aa6.69□□□□□ -1.34
PDGFRA-206ENST00000508170 OR5AK3PQ8NH89 298 aa6.69□□□□□ -1.34
PDGFRA-206ENST00000508170 ABHD4Q8TB40 342 aa6.69□□□□□ -1.34
PDGFRA-206ENST00000508170 BPIFA2Q96DR5 249 aa6.69□□□□□ -1.34
PDGFRA-206ENST00000508170 KAZALD1Q96I82 304 aa6.69□□□□□ -1.34
PDGFRA-206ENST00000508170 ZNF512Q96ME7 567 aaPredicted RBP6.69□□□□□ -1.34
PDGFRA-206ENST00000508170 SORCS2Q96PQ0 1159 aa6.69□□□□□ -1.34
PDGFRA-206ENST00000508170 ZNF347Q96SE7 839 aa6.69□□□□□ -1.34
PDGFRA-206ENST00000508170 ZSWIM1Q9BR11 485 aa6.69□□□□□ -1.34
PDGFRA-206ENST00000508170 RAB11FIP5Q9BXF6 653 aa6.69□□□□□ -1.34
PDGFRA-206ENST00000508170 C5orf66Q9H5L9 145 aa6.69□□□□□ -1.34
PDGFRA-206ENST00000508170 IKZF5Q9H5V7 419 aa6.69□□□□□ -1.34
PDGFRA-206ENST00000508170 TMEM27Q9HBJ8 222 aa6.69□□□□□ -1.34
PDGFRA-206ENST00000508170 PILRAQ9UKJ1 303 aa6.69□□□□□ -1.34
PDGFRA-206ENST00000508170 PRELID3BQ9Y3B1 194 aa6.69□□□□□ -1.34
PDGFRA-206ENST00000508170 NME7Q9Y5B8 376 aa6.69□□□□□ -1.34
PDGFRA-206ENST00000508170 ETV7Q9Y603 341 aa6.69□□□□□ -1.34
PDGFRA-206ENST00000508170 ADAMTS7Q9UKP4 1686 aa6.69□□□□□ -1.34
PDGFRA-206ENST00000508170 KAT6AQ92794 2004 aa6.69□□□□□ -1.34
PDGFRA-206ENST00000508170 F5H697 171 aa6.68□□□□□ -1.34
PDGFRA-206ENST00000508170 SLC31A1O15431 190 aa6.68□□□□□ -1.34
PDGFRA-206ENST00000508170 FGF16O43320 207 aa6.68□□□□□ -1.34
PDGFRA-206ENST00000508170 EFNA2O43921 213 aa6.68□□□□□ -1.34
PDGFRA-206ENST00000508170 EFEMP2O95967 443 aa6.68□□□□□ -1.34
PDGFRA-206ENST00000508170 VSIG10L2P0DP72 767 aa6.68□□□□□ -1.34
PDGFRA-206ENST00000508170 ARSBP15848 533 aa6.68□□□□□ -1.34
PDGFRA-206ENST00000508170 F8A1P23610 371 aa6.68□□□□□ -1.34
PDGFRA-206ENST00000508170 DNASE1L1P49184 302 aa6.68□□□□□ -1.34
PDGFRA-206ENST00000508170 METAP2P50579 478 aaKnown RBP eCLIP6.68□□□□□ -1.34
PDGFRA-206ENST00000508170 CRISP1P54107 249 aa6.68□□□□□ -1.34
PDGFRA-206ENST00000508170 MAZP56270 477 aaKnown RBP6.68□□□□□ -1.34
PDGFRA-206ENST00000508170 NECTIN1Q15223 517 aa6.68□□□□□ -1.34
PDGFRA-206ENST00000508170 SPA17Q15506 151 aa6.68□□□□□ -1.34
PDGFRA-206ENST00000508170 CSRP2Q16527 193 aa6.68□□□□□ -1.34
PDGFRA-206ENST00000508170 PRSS36Q5K4E3 855 aa6.68□□□□□ -1.34
PDGFRA-206ENST00000508170 TMEM179Q6ZVK1 233 aa6.68□□□□□ -1.34
PDGFRA-206ENST00000508170 SYT12Q8IV01 421 aa6.68□□□□□ -1.34
PDGFRA-206ENST00000508170 LGI3Q8N145 548 aa6.68□□□□□ -1.34
PDGFRA-206ENST00000508170 PLPPR1Q8TBJ4 325 aa6.68□□□□□ -1.34
PDGFRA-206ENST00000508170 PRR25Q96S07 402 aa6.68□□□□□ -1.34
PDGFRA-206ENST00000508170 KIFC1Q9BW19 673 aa6.68□□□□□ -1.34
PDGFRA-206ENST00000508170 TMEM138Q9NPI0 162 aa6.68□□□□□ -1.34
PDGFRA-206ENST00000508170 ZNF391Q9UJN7 358 aa6.68□□□□□ -1.34
PDGFRA-206ENST00000508170 OAZ3Q9UMX2 235 aa6.68□□□□□ -1.34
PDGFRA-206ENST00000508170 OR51B4Q9Y5P0 310 aa6.68□□□□□ -1.34
PDGFRA-206ENST00000508170 KIF1AQ12756 1690 aa6.68□□□□□ -1.34
PDGFRA-206ENST00000508170 C21orf140B9A014 251 aa6.68□□□□□ -1.34
PDGFRA-206ENST00000508170 TMX2-CTNND1H3BSU7 103 aa6.68□□□□□ -1.34
PDGFRA-206ENST00000508170 IMPA2O14732 288 aa6.68□□□□□ -1.34
PDGFRA-206ENST00000508170 HYAL3O43820 417 aaPredicted RBP6.68□□□□□ -1.34
PDGFRA-206ENST00000508170 HPGDSO60760 199 aa6.68□□□□□ -1.34
PDGFRA-206ENST00000508170 SHOX2O60902 331 aaPredicted RBP6.68□□□□□ -1.34
PDGFRA-206ENST00000508170 GJB5O95377 273 aa6.68□□□□□ -1.34
PDGFRA-206ENST00000508170 CD160O95971 181 aa6.68□□□□□ -1.34
PDGFRA-206ENST00000508170 TIMP1P01033 207 aa6.68□□□□□ -1.34
PDGFRA-206ENST00000508170 KLK3P07288 261 aaPredicted RBP6.68□□□□□ -1.34
PDGFRA-206ENST00000508170 ITPKBP27987 946 aa6.68□□□□□ -1.34
PDGFRA-206ENST00000508170 PMELP40967 661 aa6.68□□□□□ -1.34
PDGFRA-206ENST00000508170 CX3CR1P49238 355 aa6.68□□□□□ -1.34
PDGFRA-206ENST00000508170 CCR6P51684 374 aa6.68□□□□□ -1.34
PDGFRA-206ENST00000508170 CTSCP53634 463 aa6.68□□□□□ -1.34
PDGFRA-206ENST00000508170 ERVPABLB-1P60509 514 aa6.68□□□□□ -1.34
PDGFRA-206ENST00000508170 SNAP25P60880 206 aa6.68□□□□□ -1.34
PDGFRA-206ENST00000508170 MRPS11P82912 194 aaKnown RBP6.68□□□□□ -1.34
PDGFRA-206ENST00000508170 DEFA6Q01524 100 aa6.68□□□□□ -1.34
PDGFRA-206ENST00000508170 SRYQ05066 204 aa6.68□□□□□ -1.34
PDGFRA-206ENST00000508170 KLRB1Q12918 225 aa6.68□□□□□ -1.34
PDGFRA-206ENST00000508170 DMRTC1Q5HYR2 192 aa6.68□□□□□ -1.34
PDGFRA-206ENST00000508170 TPRG1LQ5T0D9 272 aa6.68□□□□□ -1.34
PDGFRA-206ENST00000508170 FAM102AQ5T9C2 384 aaPredicted RBP6.68□□□□□ -1.34
PDGFRA-206ENST00000508170 OGFRL1Q5TC84 451 aaPredicted RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms