RNA–Protein interactions for RNA: ENST00000507778.1

HMGB1P28-201, Transcript of high mobility group box 1 pseudogene 28, humanhuman

BASIC

Gene HMGB1P28, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P28-201ENST00000507778 CA11O75493 328 aa2.68□□□□□ -1.98
HMGB1P28-201ENST00000507778 CST1P01037 141 aa2.68□□□□□ -1.98
HMGB1P28-201ENST00000507778 GKN3PP0CG01 181 aa2.68□□□□□ -1.98
HMGB1P28-201ENST00000507778 TNNI1P19237 187 aa2.68□□□□□ -1.98
HMGB1P28-201ENST00000507778 CHMLP26374 656 aa2.68□□□□□ -1.98
HMGB1P28-201ENST00000507778 LHX2P50458 406 aa2.68□□□□□ -1.98
HMGB1P28-201ENST00000507778 SUCLG1P53597 346 aaKnown RBP2.68□□□□□ -1.98
HMGB1P28-201ENST00000507778 SUB1P53999 127 aaKnown RBP eCLIP2.68□□□□□ -1.98
HMGB1P28-201ENST00000507778 UGT2B15P54855 530 aa2.68□□□□□ -1.98
HMGB1P28-201ENST00000507778 FZD2Q14332 565 aa2.68□□□□□ -1.98
HMGB1P28-201ENST00000507778 PPP1R7Q15435 360 aa2.68□□□□□ -1.98
HMGB1P28-201ENST00000507778 ZNF658BQ4V348 819 aaPredicted RBP2.68□□□□□ -1.98
HMGB1P28-201ENST00000507778 RNASEKQ6P5S7 137 aaKnown RBP2.68□□□□□ -1.98
HMGB1P28-201ENST00000507778 C19orf35Q6ZS72 473 aa2.68□□□□□ -1.98
HMGB1P28-201ENST00000507778 C6orf120Q7Z4R8 191 aa2.68□□□□□ -1.98
HMGB1P28-201ENST00000507778 ARIH2OSQ8N7S6 290 aa2.68□□□□□ -1.98
HMGB1P28-201ENST00000507778 CEP112Q8N8E3 955 aa2.68□□□□□ -1.98
HMGB1P28-201ENST00000507778 DTX3LQ8TDB6 740 aa2.68□□□□□ -1.98
HMGB1P28-201ENST00000507778 PLIN2Q99541 437 aa2.68□□□□□ -1.98
HMGB1P28-201ENST00000507778 RARRES2Q99969 163 aa2.68□□□□□ -1.98
HMGB1P28-201ENST00000507778 ECSITQ9BQ95 431 aa2.68□□□□□ -1.98
HMGB1P28-201ENST00000507778 PISDQ9UG56 409 aa2.68□□□□□ -1.98
HMGB1P28-201ENST00000507778 NUP50Q9UKX7 468 aa2.68□□□□□ -1.98
HMGB1P28-201ENST00000507778 PACSIN2Q9UNF0 486 aaPredicted RBP2.68□□□□□ -1.98
HMGB1P28-201ENST00000507778 TRAPPC4Q9Y296 219 aa2.68□□□□□ -1.98
HMGB1P28-201ENST00000507778 CSDC2Q9Y534 153 aaKnown RBP2.68□□□□□ -1.98
HMGB1P28-201ENST00000507778 HEBP2Q9Y5Z4 205 aa2.68□□□□□ -1.98
HMGB1P28-201ENST00000507778 FRMPD3Q5JV73 1810 aa2.68□□□□□ -1.98
HMGB1P28-201ENST00000507778 HEATR9A2RTY3 570 aa2.67□□□□□ -1.98
HMGB1P28-201ENST00000507778 ZNF716A6NP11 495 aa2.67□□□□□ -1.98
HMGB1P28-201ENST00000507778 KRTAP9-6A8MVA2 160 aa2.67□□□□□ -1.98
HMGB1P28-201ENST00000507778 ERVV-1B6SEH8 477 aa2.67□□□□□ -1.98
HMGB1P28-201ENST00000507778 H3BNH8 94 aa2.67□□□□□ -1.98
HMGB1P28-201ENST00000507778 AP3B1O00203 1094 aa2.67□□□□□ -1.98
HMGB1P28-201ENST00000507778 LAD1O00515 517 aa2.67□□□□□ -1.98
HMGB1P28-201ENST00000507778 PEX7O00628 323 aa2.67□□□□□ -1.98
HMGB1P28-201ENST00000507778 GOSR2O14653 212 aa2.67□□□□□ -1.98
HMGB1P28-201ENST00000507778 CSF3P09919 207 aa2.67□□□□□ -1.98
HMGB1P28-201ENST00000507778 ZNF735P0CB33 412 aa2.67□□□□□ -1.98
HMGB1P28-201ENST00000507778 HNRNPH3P31942 346 aaKnown RBP2.67□□□□□ -1.98
HMGB1P28-201ENST00000507778 TFPI2P48307 235 aa2.67□□□□□ -1.98
HMGB1P28-201ENST00000507778 MRPS22P82650 360 aaKnown RBP2.67□□□□□ -1.98
HMGB1P28-201ENST00000507778 REG3AQ06141 175 aa2.67□□□□□ -1.98
HMGB1P28-201ENST00000507778 AQP6Q13520 282 aa2.67□□□□□ -1.98
HMGB1P28-201ENST00000507778 CYB5R2Q6BCY4 276 aa2.67□□□□□ -1.98
HMGB1P28-201ENST00000507778 IGFL2Q6UWQ7 119 aa2.67□□□□□ -1.98
HMGB1P28-201ENST00000507778 TMEM107Q6UX40 140 aa2.67□□□□□ -1.98
HMGB1P28-201ENST00000507778 ZYG11AQ6WRX3 759 aa2.67□□□□□ -1.98
HMGB1P28-201ENST00000507778 PEX26Q7Z412 305 aa2.67□□□□□ -1.98
HMGB1P28-201ENST00000507778 CAMK2N1Q7Z7J9 78 aa2.67□□□□□ -1.98
HMGB1P28-201ENST00000507778 TMEM135Q86UB9 458 aa2.67□□□□□ -1.98
HMGB1P28-201ENST00000507778 LHFPL3Q86UP9 236 aa2.67□□□□□ -1.98
HMGB1P28-201ENST00000507778 MDS2Q8NDY4 140 aa2.67□□□□□ -1.98
HMGB1P28-201ENST00000507778 SPATA4Q8NEY3 305 aa2.67□□□□□ -1.98
HMGB1P28-201ENST00000507778 RNF139Q8WU17 664 aa2.67□□□□□ -1.98
HMGB1P28-201ENST00000507778 SDR42E1Q8WUS8 393 aa2.67□□□□□ -1.98
HMGB1P28-201ENST00000507778 PIBF1Q8WXW3 757 aa2.67□□□□□ -1.98
HMGB1P28-201ENST00000507778 RASD2Q96D21 266 aa2.67□□□□□ -1.98
HMGB1P28-201ENST00000507778 MED8Q96G25 268 aa2.67□□□□□ -1.98
HMGB1P28-201ENST00000507778 RNF185Q96GF1 192 aa2.67□□□□□ -1.98
HMGB1P28-201ENST00000507778 FAM210BQ96KR6 192 aa2.67□□□□□ -1.98
HMGB1P28-201ENST00000507778 ZNF331Q9NQX6 463 aaPredicted RBP2.67□□□□□ -1.98
HMGB1P28-201ENST00000507778 ZNF226Q9NYT6 803 aa2.67□□□□□ -1.98
HMGB1P28-201ENST00000507778 PSMC3IPQ9P2W1 217 aaPredicted RBP2.67□□□□□ -1.98
HMGB1P28-201ENST00000507778 DEC1Q9P2X7 70 aa2.67□□□□□ -1.98
HMGB1P28-201ENST00000507778 PCYOX1Q9UHG3 505 aa2.67□□□□□ -1.98
HMGB1P28-201ENST00000507778 TRBV6-6A0A0A6YYG2 114 aa2.66□□□□□ -1.98
HMGB1P28-201ENST00000507778 IGKV1D-13A0A0B4J2D9 117 aa2.66□□□□□ -1.98
HMGB1P28-201ENST00000507778 GOLGA8OA6NCC3 632 aa2.66□□□□□ -1.98
HMGB1P28-201ENST00000507778 GOLGA8NF8WBI6 632 aa2.66□□□□□ -1.98
HMGB1P28-201ENST00000507778 PES1O00541 588 aaKnown RBP2.66□□□□□ -1.98
HMGB1P28-201ENST00000507778 DLGAP1O14490 977 aa2.66□□□□□ -1.98
HMGB1P28-201ENST00000507778 XKRYO14609 159 aa2.66□□□□□ -1.98
HMGB1P28-201ENST00000507778 SLC25A27O95847 323 aa2.66□□□□□ -1.98
HMGB1P28-201ENST00000507778 PCCAP05165 728 aaPredicted RBP2.66□□□□□ -1.98
HMGB1P28-201ENST00000507778 CRYGBP07316 175 aa2.66□□□□□ -1.98
HMGB1P28-201ENST00000507778 CT62P0C5K7 136 aa2.66□□□□□ -1.98
HMGB1P28-201ENST00000507778 IGKV1-13P0DP09 117 aa2.66□□□□□ -1.98
HMGB1P28-201ENST00000507778 TROVE2P10155 538 aaKnown RBP eCLIP2.66□□□□□ -1.98
HMGB1P28-201ENST00000507778 PSG2P11465 335 aa2.66□□□□□ -1.98
HMGB1P28-201ENST00000507778 AZU1P20160 251 aa2.66□□□□□ -1.98
HMGB1P28-201ENST00000507778 NMUP48645 174 aa2.66□□□□□ -1.98
HMGB1P28-201ENST00000507778 IRX3P78415 501 aaPredicted RBP2.66□□□□□ -1.98
HMGB1P28-201ENST00000507778 ENPEPQ07075 957 aa2.66□□□□□ -1.98
HMGB1P28-201ENST00000507778 PSG5Q15238 335 aa2.66□□□□□ -1.98
HMGB1P28-201ENST00000507778 SGCAQ16586 387 aa2.66□□□□□ -1.98
HMGB1P28-201ENST00000507778 ZBED5Q49AG3 693 aa2.66□□□□□ -1.98
HMGB1P28-201ENST00000507778 COA6Q5JTJ3 125 aaKnown RBP2.66□□□□□ -1.98
HMGB1P28-201ENST00000507778 LCE3EQ5T5B0 92 aa2.66□□□□□ -1.98
HMGB1P28-201ENST00000507778 KRTAP5-1Q6L8H4 278 aa2.66□□□□□ -1.98
HMGB1P28-201ENST00000507778 CCDC73Q6ZRK6 1079 aa2.66□□□□□ -1.98
HMGB1P28-201ENST00000507778 H2AFVQ71UI9 128 aa2.66□□□□□ -1.98
HMGB1P28-201ENST00000507778 ZNF433Q8N7K0 673 aaPredicted RBP2.66□□□□□ -1.98
HMGB1P28-201ENST00000507778 OR56B2PQ8NGI1 322 aa2.66□□□□□ -1.98
HMGB1P28-201ENST00000507778 OR51G1Q8NGK1 321 aa2.66□□□□□ -1.98
HMGB1P28-201ENST00000507778 PLPPR1Q8TBJ4 325 aa2.66□□□□□ -1.98
HMGB1P28-201ENST00000507778 SLC22A8Q8TCC7 542 aa2.66□□□□□ -1.98
HMGB1P28-201ENST00000507778 GPR151Q8TDV0 419 aa2.66□□□□□ -1.98
HMGB1P28-201ENST00000507778 GEMIN6Q8WXD5 167 aaKnown RBP2.66□□□□□ -1.98
HMGB1P28-201ENST00000507778 TMEM158Q8WZ71 300 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms