RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 TRMT5Q32P41 509 aaKnown RBP12.51□□□□□ -0.41
HMGCS1-203ENST00000507004 ENTPD8Q5MY95 495 aa12.51□□□□□ -0.41
HMGCS1-203ENST00000507004 REP15Q6BDI9 236 aa12.51□□□□□ -0.41
HMGCS1-203ENST00000507004 ERICH5Q6P6B1 374 aa12.51□□□□□ -0.41
HMGCS1-203ENST00000507004 VHLLQ6RSH7 139 aa12.51□□□□□ -0.41
HMGCS1-203ENST00000507004 ZNF813Q6ZN06 617 aa12.51□□□□□ -0.41
HMGCS1-203ENST00000507004 CCDC80Q76M96 950 aa12.51□□□□□ -0.41
HMGCS1-203ENST00000507004 HIST3H2AQ7L7L0 130 aa12.51□□□□□ -0.41
HMGCS1-203ENST00000507004 CXXC5Q7LFL8 322 aaKnown RBP12.51□□□□□ -0.41
HMGCS1-203ENST00000507004 PIWIL3Q7Z3Z3 882 aaKnown RBP12.51□□□□□ -0.41
HMGCS1-203ENST00000507004 MDP1Q86V88 176 aa12.51□□□□□ -0.41
HMGCS1-203ENST00000507004 COMTD1Q86VU5 262 aa12.51□□□□□ -0.41
HMGCS1-203ENST00000507004 OR6X1Q8NH79 312 aa12.51□□□□□ -0.41
HMGCS1-203ENST00000507004 HIST1H2ACQ93077 130 aa12.51□□□□□ -0.41
HMGCS1-203ENST00000507004 SORCS2Q96PQ0 1159 aa12.51□□□□□ -0.41
HMGCS1-203ENST00000507004 FOXB1Q99853 325 aa12.51□□□□□ -0.41
HMGCS1-203ENST00000507004 RSPO3Q9BXY4 272 aaPredicted RBP12.51□□□□□ -0.41
HMGCS1-203ENST00000507004 DYNLRB1Q9NP97 96 aa12.51□□□□□ -0.41
HMGCS1-203ENST00000507004 NANSQ9NR45 359 aa12.51□□□□□ -0.41
HMGCS1-203ENST00000507004 STX18Q9P2W9 335 aaKnown RBP12.51□□□□□ -0.41
HMGCS1-203ENST00000507004 ZNF229Q9UJW7 825 aa12.51□□□□□ -0.41
HMGCS1-203ENST00000507004 BAG5Q9UL15 447 aa12.51□□□□□ -0.41
HMGCS1-203ENST00000507004 CMAHPQ9Y471 501 aa12.51□□□□□ -0.41
HMGCS1-203ENST00000507004 A0A0G2JND7 137 aa12.5□□□□□ -0.41
HMGCS1-203ENST00000507004 HTR3EA5X5Y0 456 aa12.5□□□□□ -0.41
HMGCS1-203ENST00000507004 BBIP1A8MTZ0 92 aa12.5□□□□□ -0.41
HMGCS1-203ENST00000507004 CENPBD1B2RD01 187 aa12.5□□□□□ -0.41
HMGCS1-203ENST00000507004 hCG_2039718K7EN88 272 aa12.5□□□□□ -0.41
HMGCS1-203ENST00000507004 M0R3H8 397 aa12.5□□□□□ -0.41
HMGCS1-203ENST00000507004 GPRIN2O60269 458 aa12.5□□□□□ -0.41
HMGCS1-203ENST00000507004 FARS2O95363 451 aaKnown RBP12.5□□□□□ -0.41
HMGCS1-203ENST00000507004 RAB36O95755 333 aa12.5□□□□□ -0.41
HMGCS1-203ENST00000507004 IGF2P01344 180 aa12.5□□□□□ -0.41
HMGCS1-203ENST00000507004 TROVE2P10155 538 aaKnown RBP eCLIP12.5□□□□□ -0.41
HMGCS1-203ENST00000507004 CBLP22681 906 aa12.5□□□□□ -0.41
HMGCS1-203ENST00000507004 CALCRP30988 508 aa12.5□□□□□ -0.41
HMGCS1-203ENST00000507004 MTPNP58546 118 aa12.5□□□□□ -0.41
HMGCS1-203ENST00000507004 TUBA1BP68363 451 aa12.5□□□□□ -0.41
HMGCS1-203ENST00000507004 TUBA4AP68366 448 aa12.5□□□□□ -0.41
HMGCS1-203ENST00000507004 HGFACQ04756 655 aa12.5□□□□□ -0.41
HMGCS1-203ENST00000507004 DAG1Q14118 895 aa12.5□□□□□ -0.41
HMGCS1-203ENST00000507004 ZNF74Q16587 644 aa12.5□□□□□ -0.41
HMGCS1-203ENST00000507004 VMACQ2NL98 169 aa12.5□□□□□ -0.41
HMGCS1-203ENST00000507004 NRN1LQ496H8 165 aa12.5□□□□□ -0.41
HMGCS1-203ENST00000507004 TUBA1AQ71U36 451 aa12.5□□□□□ -0.41
HMGCS1-203ENST00000507004 SPATA21Q7Z572 469 aa12.5□□□□□ -0.41
HMGCS1-203ENST00000507004 OR8J3Q8NGG0 315 aa12.5□□□□□ -0.41
HMGCS1-203ENST00000507004 OR6T1Q8NGN1 323 aa12.5□□□□□ -0.41
HMGCS1-203ENST00000507004 ADAMTS16Q8TE57 1224 aa12.5□□□□□ -0.41
HMGCS1-203ENST00000507004 MOGAT1Q96PD6 335 aa12.5□□□□□ -0.41
HMGCS1-203ENST00000507004 DOK1Q99704 481 aa12.5□□□□□ -0.41
HMGCS1-203ENST00000507004 PRR14Q9BWN1 585 aa12.5□□□□□ -0.41
HMGCS1-203ENST00000507004 BEX2Q9BXY8 128 aa12.5□□□□□ -0.41
HMGCS1-203ENST00000507004 SHARPINQ9H0F6 387 aa12.5□□□□□ -0.41
HMGCS1-203ENST00000507004 MS4A5Q9H3V2 200 aa12.5□□□□□ -0.41
HMGCS1-203ENST00000507004 C1orf198Q9H425 327 aa12.5□□□□□ -0.41
HMGCS1-203ENST00000507004 NPHS2Q9NP85 383 aa12.5□□□□□ -0.41
HMGCS1-203ENST00000507004 MED29Q9NX70 200 aa12.5□□□□□ -0.41
HMGCS1-203ENST00000507004 B3GNT2Q9NY97 397 aa12.5□□□□□ -0.41
HMGCS1-203ENST00000507004 KCNS2Q9ULS6 477 aa12.5□□□□□ -0.41
HMGCS1-203ENST00000507004 RTTNQ86VV8 2226 aa12.5□□□□□ -0.41
HMGCS1-203ENST00000507004 ZANQ9Y493 2812 aa12.5□□□□□ -0.41
HMGCS1-203ENST00000507004 SLC22A23A1A5C7 686 aa12.49□□□□□ -0.41
HMGCS1-203ENST00000507004 LMX1BO60663 402 aa12.49□□□□□ -0.41
HMGCS1-203ENST00000507004 HPRP00739 348 aa12.49□□□□□ -0.41
HMGCS1-203ENST00000507004 PTHP01270 115 aa12.49□□□□□ -0.41
HMGCS1-203ENST00000507004 CD79AP11912 226 aa12.49□□□□□ -0.41
HMGCS1-203ENST00000507004 NR2C1P13056 603 aa12.49□□□□□ -0.41
HMGCS1-203ENST00000507004 HLA-DOBP13765 273 aa12.49□□□□□ -0.41
HMGCS1-203ENST00000507004 APEHP13798 732 aaKnown RBP12.49□□□□□ -0.41
HMGCS1-203ENST00000507004 HNF1AP20823 631 aa12.49□□□□□ -0.41
HMGCS1-203ENST00000507004 NR4A1P22736 598 aa12.49□□□□□ -0.41
HMGCS1-203ENST00000507004 IFNA8P32881 189 aa12.49□□□□□ -0.41
HMGCS1-203ENST00000507004 THBS4P35443 961 aa12.49□□□□□ -0.41
HMGCS1-203ENST00000507004 GLRXP35754 106 aa12.49□□□□□ -0.41
HMGCS1-203ENST00000507004 RBM34P42696 430 aaKnown RBP12.49□□□□□ -0.41
HMGCS1-203ENST00000507004 GALK2Q01415 458 aa12.49□□□□□ -0.41
HMGCS1-203ENST00000507004 SNTB2Q13425 540 aaKnown RBP12.49□□□□□ -0.41
HMGCS1-203ENST00000507004 MMEL1Q495T6 779 aa12.49□□□□□ -0.41
HMGCS1-203ENST00000507004 IQCCQ4KMZ1 466 aa12.49□□□□□ -0.41
HMGCS1-203ENST00000507004 CARD17Q5XLA6 110 aa12.49□□□□□ -0.41
HMGCS1-203ENST00000507004 FAM166AQ6J272 317 aa12.49□□□□□ -0.41
HMGCS1-203ENST00000507004 NHLRC1Q6VVB1 395 aa12.49□□□□□ -0.41
HMGCS1-203ENST00000507004 SLC35D2Q76EJ3 337 aa12.49□□□□□ -0.41
HMGCS1-203ENST00000507004 RETREG3Q86VR2 466 aa12.49□□□□□ -0.41
HMGCS1-203ENST00000507004 PCYOX1LQ8NBM8 494 aa12.49□□□□□ -0.41
HMGCS1-203ENST00000507004 GPR32P1Q8NGA4 272 aa12.49□□□□□ -0.41
HMGCS1-203ENST00000507004 OR10A6Q8NH74 314 aa12.49□□□□□ -0.41
HMGCS1-203ENST00000507004 TMEM158Q8WZ71 300 aa12.49□□□□□ -0.41
HMGCS1-203ENST00000507004 HTRA1Q92743 480 aa12.49□□□□□ -0.41
HMGCS1-203ENST00000507004 ZNF566Q969W8 418 aa12.49□□□□□ -0.41
HMGCS1-203ENST00000507004 SLC25A44Q96H78 314 aaPredicted RBP12.49□□□□□ -0.41
HMGCS1-203ENST00000507004 ECSITQ9BQ95 431 aa12.49□□□□□ -0.41
HMGCS1-203ENST00000507004 ZNF426Q9BUY5 554 aa12.49□□□□□ -0.41
HMGCS1-203ENST00000507004 EMC6Q9BV81 110 aa12.49□□□□□ -0.41
HMGCS1-203ENST00000507004 NOX3Q9HBY0 568 aa12.49□□□□□ -0.41
HMGCS1-203ENST00000507004 GLTPQ9NZD2 209 aa12.49□□□□□ -0.41
HMGCS1-203ENST00000507004 AP3M1Q9Y2T2 418 aa12.49□□□□□ -0.41
HMGCS1-203ENST00000507004 CPSF4LA6NMK7 179 aaKnown RBP12.48□□□□□ -0.41
HMGCS1-203ENST00000507004 RNF13O43567 381 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms