RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 EFCAB9A8MZ26 197 aa6.39□□□□□ -1.39
GYPB-206ENST00000506516 PDLIM1O00151 329 aa6.39□□□□□ -1.39
GYPB-206ENST00000506516 FFAR1O14842 300 aa6.39□□□□□ -1.39
GYPB-206ENST00000506516 UPK3AO75631 287 aa6.39□□□□□ -1.39
GYPB-206ENST00000506516 RAD51DO75771 328 aa6.39□□□□□ -1.39
GYPB-206ENST00000506516 SERPINI2O75830 405 aa6.39□□□□□ -1.39
GYPB-206ENST00000506516 DNAJC8O75937 253 aaPredicted RBP6.39□□□□□ -1.39
GYPB-206ENST00000506516 PDE5AO76074 875 aa6.39□□□□□ -1.39
GYPB-206ENST00000506516 PRSS23O95084 383 aa6.39□□□□□ -1.39
GYPB-206ENST00000506516 GADD45GO95257 159 aa6.39□□□□□ -1.39
GYPB-206ENST00000506516 BCL10O95999 233 aa6.39□□□□□ -1.39
GYPB-206ENST00000506516 HPRP00739 348 aa6.39□□□□□ -1.39
GYPB-206ENST00000506516 THBDP07204 575 aa6.39□□□□□ -1.39
GYPB-206ENST00000506516 HLA-DOBP13765 273 aa6.39□□□□□ -1.39
GYPB-206ENST00000506516 IFNGR1P15260 489 aa6.39□□□□□ -1.39
GYPB-206ENST00000506516 HOXB6P17509 224 aaKnown RBP6.39□□□□□ -1.39
GYPB-206ENST00000506516 CDH2P19022 906 aaPredicted RBP6.39□□□□□ -1.39
GYPB-206ENST00000506516 CCKARP32238 428 aa6.39□□□□□ -1.39
GYPB-206ENST00000506516 IFNGR2P38484 337 aa6.39□□□□□ -1.39
GYPB-206ENST00000506516 SLC9A3P48764 834 aa6.39□□□□□ -1.39
GYPB-206ENST00000506516 SH3BGRP55822 239 aaPredicted RBP6.39□□□□□ -1.39
GYPB-206ENST00000506516 PRPS1P60891 318 aa6.39□□□□□ -1.39
GYPB-206ENST00000506516 VLDLRP98155 873 aa6.39□□□□□ -1.39
GYPB-206ENST00000506516 PRKCDQ05655 676 aa6.39□□□□□ -1.39
GYPB-206ENST00000506516 CHRNB3Q05901 458 aa6.39□□□□□ -1.39
GYPB-206ENST00000506516 BNIP1Q12981 228 aa6.39□□□□□ -1.39
GYPB-206ENST00000506516 CAMK2DQ13557 499 aa6.39□□□□□ -1.39
GYPB-206ENST00000506516 PPA1Q15181 289 aa6.39□□□□□ -1.39
GYPB-206ENST00000506516 TAB1Q15750 504 aa6.39□□□□□ -1.39
GYPB-206ENST00000506516 GABRA6Q16445 453 aa6.39□□□□□ -1.39
GYPB-206ENST00000506516 FAM98BQ52LJ0 330 aaKnown RBP6.39□□□□□ -1.39
GYPB-206ENST00000506516 BEX5Q5H9J7 111 aa6.39□□□□□ -1.39
GYPB-206ENST00000506516 FGD3Q5JSP0 725 aa6.39□□□□□ -1.39
GYPB-206ENST00000506516 LCN8Q6JVE9 175 aa6.39□□□□□ -1.39
GYPB-206ENST00000506516 PODNL1Q6PEZ8 512 aa6.39□□□□□ -1.39
GYPB-206ENST00000506516 KLHL24Q6TFL4 600 aa6.39□□□□□ -1.39
GYPB-206ENST00000506516 C22orf34Q6ZV56 151 aa6.39□□□□□ -1.39
GYPB-206ENST00000506516 TMPRSS11FQ6ZWK6 438 aa6.39□□□□□ -1.39
GYPB-206ENST00000506516 SLC35D2Q76EJ3 337 aa6.39□□□□□ -1.39
GYPB-206ENST00000506516 SLC46A3Q7Z3Q1 461 aa6.39□□□□□ -1.39
GYPB-206ENST00000506516 HDDC2Q7Z4H3 204 aa6.39□□□□□ -1.39
GYPB-206ENST00000506516 OAFQ86UD1 273 aa6.39□□□□□ -1.39
GYPB-206ENST00000506516 LSRQ86X29 649 aaPredicted RBP6.39□□□□□ -1.39
GYPB-206ENST00000506516 CDC20BQ86Y33 519 aa6.39□□□□□ -1.39
GYPB-206ENST00000506516 ZDHHC21Q8IVQ6 265 aa6.39□□□□□ -1.39
GYPB-206ENST00000506516 NRMQ8IXM6 262 aa6.39□□□□□ -1.39
GYPB-206ENST00000506516 C17orf78Q8N4C9 275 aa6.39□□□□□ -1.39
GYPB-206ENST00000506516 OR6N1Q8NGY5 312 aa6.39□□□□□ -1.39
GYPB-206ENST00000506516 OR52J3Q8NH60 311 aa6.39□□□□□ -1.39
GYPB-206ENST00000506516 OR6X1Q8NH79 312 aa6.39□□□□□ -1.39
GYPB-206ENST00000506516 ZNF566Q969W8 418 aa6.39□□□□□ -1.39
GYPB-206ENST00000506516 SLC25A44Q96H78 314 aaPredicted RBP6.39□□□□□ -1.39
GYPB-206ENST00000506516 TXNDC15Q96J42 360 aa6.39□□□□□ -1.39
GYPB-206ENST00000506516 OR2M2Q96R28 347 aa6.39□□□□□ -1.39
GYPB-206ENST00000506516 SEPHS2Q99611 448 aa6.39□□□□□ -1.39
GYPB-206ENST00000506516 EMC6Q9BV81 110 aa6.39□□□□□ -1.39
GYPB-206ENST00000506516 NDEL1Q9GZM8 345 aa6.39□□□□□ -1.39
GYPB-206ENST00000506516 MRPL18Q9H0U6 180 aaKnown RBP6.39□□□□□ -1.39
GYPB-206ENST00000506516 ESRP2Q9H6T0 727 aaKnown RBP6.39□□□□□ -1.39
GYPB-206ENST00000506516 MAGIXQ9H6Y5 334 aa6.39□□□□□ -1.39
GYPB-206ENST00000506516 INIPQ9NRY2 104 aa6.39□□□□□ -1.39
GYPB-206ENST00000506516 C20orf141Q9NUB4 165 aa6.39□□□□□ -1.39
GYPB-206ENST00000506516 MED29Q9NX70 200 aa6.39□□□□□ -1.39
GYPB-206ENST00000506516 TMCC3Q9ULS5 477 aa6.39□□□□□ -1.39
GYPB-206ENST00000506516 TMEM5Q9Y2B1 443 aa6.39□□□□□ -1.39
GYPB-206ENST00000506516 MED12LQ86YW9 2145 aa6.38□□□□□ -1.39
GYPB-206ENST00000506516 PCNX1Q96RV3 2341 aa6.38□□□□□ -1.39
GYPB-206ENST00000506516 SETXQ7Z333 2677 aaKnown RBP6.38□□□□□ -1.39
GYPB-206ENST00000506516 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.38□□□□□ -1.39
GYPB-206ENST00000506516 CYSRT1A8MQ03 144 aa6.38□□□□□ -1.39
GYPB-206ENST00000506516 DEFB108AA8MXU0 73 aa6.38□□□□□ -1.39
GYPB-206ENST00000506516 MCIDASD6RGH6 385 aa6.38□□□□□ -1.39
GYPB-206ENST00000506516 RPL36A-HNRNPH2H7BZ11 118 aa6.38□□□□□ -1.39
GYPB-206ENST00000506516 M0R3G1 203 aa6.38□□□□□ -1.39
GYPB-206ENST00000506516 GSC2O15499 205 aa6.38□□□□□ -1.39
GYPB-206ENST00000506516 CLOCKO15516 846 aa6.38□□□□□ -1.39
GYPB-206ENST00000506516 KLF4O43474 513 aa6.38□□□□□ -1.39
GYPB-206ENST00000506516 TRAF3IP2O43734 574 aaPredicted RBP6.38□□□□□ -1.39
GYPB-206ENST00000506516 KRT36O76013 467 aa6.38□□□□□ -1.39
GYPB-206ENST00000506516 DIRAS1O95057 198 aa6.38□□□□□ -1.39
GYPB-206ENST00000506516 WNT11O96014 354 aa6.38□□□□□ -1.39
GYPB-206ENST00000506516 HRGP04196 525 aa6.38□□□□□ -1.39
GYPB-206ENST00000506516 SEMG1P04279 462 aa6.38□□□□□ -1.39
GYPB-206ENST00000506516 F13BP05160 661 aa6.38□□□□□ -1.39
GYPB-206ENST00000506516 CD3EP07766 207 aa6.38□□□□□ -1.39
GYPB-206ENST00000506516 ITGA5P08648 1049 aa6.38□□□□□ -1.39
GYPB-206ENST00000506516 AQP2P41181 271 aa6.38□□□□□ -1.39
GYPB-206ENST00000506516 DAP3P51398 398 aaKnown RBP6.38□□□□□ -1.39
GYPB-206ENST00000506516 BIDP55957 195 aa6.38□□□□□ -1.39
GYPB-206ENST00000506516 KRTAP10-9P60411 292 aa6.38□□□□□ -1.39
GYPB-206ENST00000506516 UBE2NP61088 152 aaKnown RBP6.38□□□□□ -1.39
GYPB-206ENST00000506516 MS4A2Q01362 244 aa6.38□□□□□ -1.39
GYPB-206ENST00000506516 SPIBQ01892 262 aa6.38□□□□□ -1.39
GYPB-206ENST00000506516 ROR2Q01974 943 aaKnown RBP6.38□□□□□ -1.39
GYPB-206ENST00000506516 RPL18Q07020 188 aaKnown RBP6.38□□□□□ -1.39
GYPB-206ENST00000506516 ALG10Q5BKT4 473 aa6.38□□□□□ -1.39
GYPB-206ENST00000506516 C9orf135Q5VTT2 229 aa6.38□□□□□ -1.39
GYPB-206ENST00000506516 CARD17Q5XLA6 110 aa6.38□□□□□ -1.39
GYPB-206ENST00000506516 ANKRD16Q6P6B7 361 aa6.38□□□□□ -1.39
GYPB-206ENST00000506516 TBPL2Q6SJ96 375 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms