RNA–Protein interactions for RNA: ENST00000506042.5

SQSTM1-210, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 921 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-210ENST00000506042 AHCYP23526 432 aa18.13■□□□□ 0.49
SQSTM1-210ENST00000506042 SLC6A2P23975 617 aa18.13■□□□□ 0.49
SQSTM1-210ENST00000506042 CSNK1A1P48729 337 aa18.13■□□□□ 0.49
SQSTM1-210ENST00000506042 RAB1AP62820 205 aa18.13■□□□□ 0.49
SQSTM1-210ENST00000506042 SRSF2Q01130 221 aaKnown RBP18.13■□□□□ 0.49
SQSTM1-210ENST00000506042 NKPD1Q17RQ9 610 aa18.13■□□□□ 0.49
SQSTM1-210ENST00000506042 GLIPR1L2Q4G1C9 344 aa18.13■□□□□ 0.49
SQSTM1-210ENST00000506042 GCNT6Q5T4J0 391 aa18.13■□□□□ 0.49
SQSTM1-210ENST00000506042 TMEM154Q6P9G4 183 aa18.13■□□□□ 0.49
SQSTM1-210ENST00000506042 DHRS4L2Q6PKH6 230 aa18.13■□□□□ 0.49
SQSTM1-210ENST00000506042 ZNF627Q7L945 461 aa18.13■□□□□ 0.49
SQSTM1-210ENST00000506042 PIWIL3Q7Z3Z3 882 aaKnown RBP18.13■□□□□ 0.49
SQSTM1-210ENST00000506042 PXKQ7Z7A4 578 aa18.13■□□□□ 0.49
SQSTM1-210ENST00000506042 ZCCHC24Q8N2G6 241 aaKnown RBP18.13■□□□□ 0.49
SQSTM1-210ENST00000506042 RAB39BQ96DA2 213 aa18.13■□□□□ 0.49
SQSTM1-210ENST00000506042 FOXB1Q99853 325 aa18.13■□□□□ 0.49
SQSTM1-210ENST00000506042 HIF1ANQ9NWT6 349 aa18.13■□□□□ 0.49
SQSTM1-210ENST00000506042 KLHL14Q9P2G3 628 aa18.13■□□□□ 0.49
SQSTM1-210ENST00000506042 TMEM129A0AVI4 362 aa18.12■□□□□ 0.49
SQSTM1-210ENST00000506042 TRIM77I1YAP6 450 aa18.12■□□□□ 0.49
SQSTM1-210ENST00000506042 SEC14L2O76054 403 aa18.12■□□□□ 0.49
SQSTM1-210ENST00000506042 RUNX1T1Q06455 604 aa18.12■□□□□ 0.49
SQSTM1-210ENST00000506042 PIGFQ07326 219 aa18.12■□□□□ 0.49
SQSTM1-210ENST00000506042 PCGF3Q3KNV8 242 aa18.12■□□□□ 0.49
SQSTM1-210ENST00000506042 UNQ6126/PRO20091Q6UXV3 157 aa18.12■□□□□ 0.49
SQSTM1-210ENST00000506042 TREML1Q86YW5 311 aa18.12■□□□□ 0.49
SQSTM1-210ENST00000506042 OR1J2Q8NGS2 313 aa18.12■□□□□ 0.49
SQSTM1-210ENST00000506042 MAELQ96JY0 434 aaKnown RBP18.12■□□□□ 0.49
SQSTM1-210ENST00000506042 SOX7Q9BT81 388 aa18.12■□□□□ 0.49
SQSTM1-210ENST00000506042 MRPL37Q9BZE1 423 aaKnown RBP18.12■□□□□ 0.49
SQSTM1-210ENST00000506042 SLC6A13Q9NSD5 602 aa18.12■□□□□ 0.49
SQSTM1-210ENST00000506042 B3GNT2Q9NY97 397 aa18.12■□□□□ 0.49
SQSTM1-210ENST00000506042 MRPL39Q9NYK5 338 aaKnown RBP18.12■□□□□ 0.49
SQSTM1-210ENST00000506042 DUSP13Q9UII6 198 aa18.12■□□□□ 0.49
SQSTM1-210ENST00000506042 PPIHO43447 177 aaKnown RBP18.11■□□□□ 0.49
SQSTM1-210ENST00000506042 SNNO75324 88 aaPredicted RBP18.11■□□□□ 0.49
SQSTM1-210ENST00000506042 B4GALT1P15291 398 aa18.11■□□□□ 0.49
SQSTM1-210ENST00000506042 CBLP22681 906 aa18.11■□□□□ 0.49
SQSTM1-210ENST00000506042 IL2RGP31785 369 aa18.11■□□□□ 0.49
SQSTM1-210ENST00000506042 HOXC5Q00444 222 aa18.11■□□□□ 0.49
SQSTM1-210ENST00000506042 CDK6Q00534 326 aa18.11■□□□□ 0.49
SQSTM1-210ENST00000506042 PLP2Q04941 152 aa18.11■□□□□ 0.49
SQSTM1-210ENST00000506042 TRIP10Q15642 601 aa18.11■□□□□ 0.49
SQSTM1-210ENST00000506042 RGS7BPQ6MZT1 257 aaPredicted RBP18.11■□□□□ 0.49
SQSTM1-210ENST00000506042 TMEM53Q6P2H8 277 aa18.11■□□□□ 0.49
SQSTM1-210ENST00000506042 C3orf56Q8N813 242 aa18.11■□□□□ 0.49
SQSTM1-210ENST00000506042 VPS33AQ96AX1 596 aa18.11■□□□□ 0.49
SQSTM1-210ENST00000506042 SYT3Q9BQG1 590 aa18.11■□□□□ 0.49
SQSTM1-210ENST00000506042 TMEM43Q9BTV4 400 aa18.11■□□□□ 0.49
SQSTM1-210ENST00000506042 SLC52A3Q9NQ40 469 aa18.11■□□□□ 0.49
SQSTM1-210ENST00000506042 SLCO1C1Q9NYB5 712 aa18.11■□□□□ 0.49
SQSTM1-210ENST00000506042 TMEM120BA0PK00 339 aa18.1■□□□□ 0.49
SQSTM1-210ENST00000506042 POLR3GO15318 223 aaPredicted RBP18.1■□□□□ 0.49
SQSTM1-210ENST00000506042 MGRN1O60291 552 aa18.1■□□□□ 0.49
SQSTM1-210ENST00000506042 HIST1H2ABP04908 130 aa18.1■□□□□ 0.49
SQSTM1-210ENST00000506042 OR8G3PP0DMU2 310 aa18.1■□□□□ 0.49
SQSTM1-210ENST00000506042 ZNF35P13682 527 aa18.1■□□□□ 0.49
SQSTM1-210ENST00000506042 ZNF14P17017 642 aaPredicted RBP18.1■□□□□ 0.49
SQSTM1-210ENST00000506042 LIMS1P48059 325 aa18.1■□□□□ 0.49
SQSTM1-210ENST00000506042 GIPRP48546 466 aa18.1■□□□□ 0.49
SQSTM1-210ENST00000506042 MYBPC1Q00872 1141 aa18.1■□□□□ 0.49
SQSTM1-210ENST00000506042 FAM209AQ5JX71 171 aa18.1■□□□□ 0.49
SQSTM1-210ENST00000506042 HIST3H2AQ7L7L0 130 aa18.1■□□□□ 0.49
SQSTM1-210ENST00000506042 HDDC2Q7Z4H3 204 aa18.1■□□□□ 0.49
SQSTM1-210ENST00000506042 MYPOPQ86VE0 399 aaPredicted RBP18.1■□□□□ 0.49
SQSTM1-210ENST00000506042 CLDND2Q8NHS1 167 aa18.1■□□□□ 0.49
SQSTM1-210ENST00000506042 GTF2H4Q92759 462 aa18.1■□□□□ 0.49
SQSTM1-210ENST00000506042 GCDHQ92947 438 aaPredicted RBP18.1■□□□□ 0.49
SQSTM1-210ENST00000506042 HIST1H2ACQ93077 130 aa18.1■□□□□ 0.49
SQSTM1-210ENST00000506042 MAL2Q969L2 176 aa18.1■□□□□ 0.49
SQSTM1-210ENST00000506042 SLC41A3Q96GZ6 507 aa18.1■□□□□ 0.49
SQSTM1-210ENST00000506042 TIMD4Q96H15 378 aa18.1■□□□□ 0.49
SQSTM1-210ENST00000506042 LRRC37BQ96QE4 947 aa18.1■□□□□ 0.49
SQSTM1-210ENST00000506042 EMC6Q9BV81 110 aa18.1■□□□□ 0.49
SQSTM1-210ENST00000506042 RBM4Q9BWF3 364 aaKnown RBP18.1■□□□□ 0.49
SQSTM1-210ENST00000506042 CDH20Q9HBT6 801 aa18.1■□□□□ 0.49
SQSTM1-210ENST00000506042 SEC14L4Q9UDX3 406 aa18.1■□□□□ 0.49
SQSTM1-210ENST00000506042 ANGPT4Q9Y264 503 aa18.1■□□□□ 0.49
SQSTM1-210ENST00000506042 CUBNO60494 3623 aa18.1■□□□□ 0.49
SQSTM1-210ENST00000506042 ANK3Q12955 4377 aaKnown RBP18.09■□□□□ 0.49
SQSTM1-210ENST00000506042 TPD52L2O43399 206 aaKnown RBP18.09■□□□□ 0.49
SQSTM1-210ENST00000506042 PNPP00491 289 aa18.09■□□□□ 0.49
SQSTM1-210ENST00000506042 SERPINA5P05154 406 aa18.09■□□□□ 0.49
SQSTM1-210ENST00000506042 ADORA3P0DMS8 318 aa18.09■□□□□ 0.49
SQSTM1-210ENST00000506042 ARAFP10398 606 aa18.09■□□□□ 0.49
SQSTM1-210ENST00000506042 SLC18A1P54219 525 aa18.09■□□□□ 0.49
SQSTM1-210ENST00000506042 KLF3P57682 345 aaPredicted RBP18.09■□□□□ 0.49
SQSTM1-210ENST00000506042 SLC36A2Q495M3 483 aa18.09■□□□□ 0.49
SQSTM1-210ENST00000506042 GTDC1Q4AE62 458 aa18.09■□□□□ 0.49
SQSTM1-210ENST00000506042 ARMC8Q8IUR7 673 aa18.09■□□□□ 0.49
SQSTM1-210ENST00000506042 CPEB3Q8NE35 698 aaKnown RBP18.09■□□□□ 0.49
SQSTM1-210ENST00000506042 OR5J2Q8NH18 312 aa18.09■□□□□ 0.49
SQSTM1-210ENST00000506042 SGMS2Q8NHU3 365 aa18.09■□□□□ 0.49
SQSTM1-210ENST00000506042 NFKBIDQ8NI38 313 aa18.09■□□□□ 0.49
SQSTM1-210ENST00000506042 C11orf40Q8WZ69 217 aa18.09■□□□□ 0.49
SQSTM1-210ENST00000506042 KCNN2Q9H2S1 579 aa18.09■□□□□ 0.49
SQSTM1-210ENST00000506042 NARFLQ9H6Q4 476 aa18.09■□□□□ 0.49
SQSTM1-210ENST00000506042 RNF121Q9H920 327 aa18.09■□□□□ 0.49
SQSTM1-210ENST00000506042 PCDHB10Q9UN67 800 aa18.09■□□□□ 0.49
SQSTM1-210ENST00000506042 CHST2Q9Y4C5 530 aa18.09■□□□□ 0.49
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