RNA–Protein interactions for RNA: ENST00000504881.1

SRFBP1-202, Transcript of serum response factor binding protein 1, humanhuman

TSL 3

Gene SRFBP1, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-202ENST00000504881 COL5A1P20908 1838 aaPredicted RBP1.94□□□□□ -2.1
SRFBP1-202ENST00000504881 BRWD3Q6RI45 1802 aa1.94□□□□□ -2.1
SRFBP1-202ENST00000504881 IGLV3-12A0A075B6K2 115 aa1.94□□□□□ -2.1
SRFBP1-202ENST00000504881 CIB4A0PJX0 185 aa1.94□□□□□ -2.1
SRFBP1-202ENST00000504881 H0YHG0 523 aa1.94□□□□□ -2.1
SRFBP1-202ENST00000504881 MED7O43513 233 aa1.94□□□□□ -2.1
SRFBP1-202ENST00000504881 IGHV1-8P0DP01 117 aa1.94□□□□□ -2.1
SRFBP1-202ENST00000504881 CCDC130P13994 396 aa1.94□□□□□ -2.1
SRFBP1-202ENST00000504881 NCF1P14598 390 aaPredicted RBP1.94□□□□□ -2.1
SRFBP1-202ENST00000504881 PAX7P23759 505 aa1.94□□□□□ -2.1
SRFBP1-202ENST00000504881 SOX6P35712 828 aa1.94□□□□□ -2.1
SRFBP1-202ENST00000504881 CYB561P49447 251 aa1.94□□□□□ -2.1
SRFBP1-202ENST00000504881 KRTAP12-4P60329 112 aa1.94□□□□□ -2.1
SRFBP1-202ENST00000504881 ESRRGP62508 458 aa1.94□□□□□ -2.1
SRFBP1-202ENST00000504881 NCBP1Q09161 790 aaKnown RBP1.94□□□□□ -2.1
SRFBP1-202ENST00000504881 KLRB1Q12918 225 aa1.94□□□□□ -2.1
SRFBP1-202ENST00000504881 PLD1Q13393 1074 aa1.94□□□□□ -2.1
SRFBP1-202ENST00000504881 OR5I1Q13606 314 aa1.94□□□□□ -2.1
SRFBP1-202ENST00000504881 GANABQ14697 944 aaKnown RBP1.94□□□□□ -2.1
SRFBP1-202ENST00000504881 TPD52L1Q16890 204 aaPredicted RBP1.94□□□□□ -2.1
SRFBP1-202ENST00000504881 ZNF684Q5T5D7 378 aa1.94□□□□□ -2.1
SRFBP1-202ENST00000504881 HES5Q5TA89 166 aa1.94□□□□□ -2.1
SRFBP1-202ENST00000504881 CNIH2Q6PI25 160 aa1.94□□□□□ -2.1
SRFBP1-202ENST00000504881 BRD3OSQ6XYD6 125 aa1.94□□□□□ -2.1
SRFBP1-202ENST00000504881 WDR86Q86TI4 376 aa1.94□□□□□ -2.1
SRFBP1-202ENST00000504881 OR52H1Q8NGJ2 320 aa1.94□□□□□ -2.1
SRFBP1-202ENST00000504881 CCDC110Q8TBZ0 833 aa1.94□□□□□ -2.1
SRFBP1-202ENST00000504881 TGM7Q96PF1 710 aa1.94□□□□□ -2.1
SRFBP1-202ENST00000504881 CLCC1Q96S66 551 aa1.94□□□□□ -2.1
SRFBP1-202ENST00000504881 RAB18Q9NP72 206 aa1.94□□□□□ -2.1
SRFBP1-202ENST00000504881 LAMP5Q9UJQ1 280 aa1.94□□□□□ -2.1
SRFBP1-202ENST00000504881 PACSIN2Q9UNF0 486 aaPredicted RBP1.94□□□□□ -2.1
SRFBP1-202ENST00000504881 POLDIP2Q9Y2S7 368 aa1.94□□□□□ -2.1
SRFBP1-202ENST00000504881 TUBGCP6Q96RT7 1819 aa1.94□□□□□ -2.1
SRFBP1-202ENST00000504881 IGHV5-10-1A0A0J9YXX1 117 aa1.93□□□□□ -2.1
SRFBP1-202ENST00000504881 HSD17B6O14756 317 aa1.93□□□□□ -2.1
SRFBP1-202ENST00000504881 POLR2DO15514 142 aaKnown RBP1.93□□□□□ -2.1
SRFBP1-202ENST00000504881 IGKV1D-16P01601 117 aa1.93□□□□□ -2.1
SRFBP1-202ENST00000504881 GAPDHP04406 335 aaKnown RBP1.93□□□□□ -2.1
SRFBP1-202ENST00000504881 EPB41P11171 864 aaKnown RBP1.93□□□□□ -2.1
SRFBP1-202ENST00000504881 RDXP35241 583 aaKnown RBP1.93□□□□□ -2.1
SRFBP1-202ENST00000504881 RPL13AP40429 203 aaKnown RBP1.93□□□□□ -2.1
SRFBP1-202ENST00000504881 ERCC8Q13216 396 aa1.93□□□□□ -2.1
SRFBP1-202ENST00000504881 AQP6Q13520 282 aa1.93□□□□□ -2.1
SRFBP1-202ENST00000504881 DMRTC1Q5HYR2 192 aa1.93□□□□□ -2.1
SRFBP1-202ENST00000504881 NCCRP1Q6ZVX7 275 aaPredicted RBP1.93□□□□□ -2.1
SRFBP1-202ENST00000504881 STRADAQ7RTN6 431 aa1.93□□□□□ -2.1
SRFBP1-202ENST00000504881 PIANPQ8IYJ0 282 aa1.93□□□□□ -2.1
SRFBP1-202ENST00000504881 OSR2Q8N2R0 312 aa1.93□□□□□ -2.1
SRFBP1-202ENST00000504881 STPG2Q8N412 459 aa1.93□□□□□ -2.1
SRFBP1-202ENST00000504881 UBE2E3Q969T4 207 aa1.93□□□□□ -2.1
SRFBP1-202ENST00000504881 LRRN3Q9H3W5 708 aa1.93□□□□□ -2.1
SRFBP1-202ENST00000504881 MRPL47Q9HD33 250 aaKnown RBP1.93□□□□□ -2.1
SRFBP1-202ENST00000504881 FARSBQ9NSD9 589 aaKnown RBP1.93□□□□□ -2.1
SRFBP1-202ENST00000504881 EXD2Q9NVH0 621 aa1.93□□□□□ -2.1
SRFBP1-202ENST00000504881 CHRNA9Q9UGM1 479 aa1.93□□□□□ -2.1
SRFBP1-202ENST00000504881 DHX57Q6P158 1386 aaKnown RBP1.93□□□□□ -2.1
SRFBP1-202ENST00000504881 ATP8B3O60423 1300 aa1.92□□□□□ -2.1
SRFBP1-202ENST00000504881 YEATS2Q9ULM3 1422 aa1.92□□□□□ -2.1
SRFBP1-202ENST00000504881 IGLV3-22A0A075B6J6 115 aa1.92□□□□□ -2.1
SRFBP1-202ENST00000504881 TMEM223A0PJW6 202 aa1.92□□□□□ -2.1
SRFBP1-202ENST00000504881 OR5B21A6NL26 309 aa1.92□□□□□ -2.1
SRFBP1-202ENST00000504881 UPK3AO75631 287 aa1.92□□□□□ -2.1
SRFBP1-202ENST00000504881 PTMSP20962 102 aa1.92□□□□□ -2.1
SRFBP1-202ENST00000504881 GNA11P29992 359 aa1.92□□□□□ -2.1
SRFBP1-202ENST00000504881 MDH1P40925 334 aaKnown RBP1.92□□□□□ -2.1
SRFBP1-202ENST00000504881 RGS4P49798 205 aa1.92□□□□□ -2.1
SRFBP1-202ENST00000504881 CRYBB1P53674 252 aaPredicted RBP1.92□□□□□ -2.1
SRFBP1-202ENST00000504881 SUB1P53999 127 aaKnown RBP eCLIP1.92□□□□□ -2.1
SRFBP1-202ENST00000504881 MEF2BQ02080 365 aaPredicted RBP1.92□□□□□ -2.1
SRFBP1-202ENST00000504881 RAET1LQ5VY80 246 aa1.92□□□□□ -2.1
SRFBP1-202ENST00000504881 TTC23Q5W5X9 447 aa1.92□□□□□ -2.1
SRFBP1-202ENST00000504881 UTS2BQ765I0 119 aa1.92□□□□□ -2.1
SRFBP1-202ENST00000504881 LGI3Q8N145 548 aa1.92□□□□□ -2.1
SRFBP1-202ENST00000504881 MREGQ8N565 214 aa1.92□□□□□ -2.1
SRFBP1-202ENST00000504881 SDR42E1Q8WUS8 393 aa1.92□□□□□ -2.1
SRFBP1-202ENST00000504881 SGK3Q96BR1 496 aa1.92□□□□□ -2.1
SRFBP1-202ENST00000504881 CXorf40BQ96DE9 158 aa1.92□□□□□ -2.1
SRFBP1-202ENST00000504881 RBMXL1Q96E39 390 aaKnown RBP1.92□□□□□ -2.1
SRFBP1-202ENST00000504881 COQ10BQ9H8M1 238 aa1.92□□□□□ -2.1
SRFBP1-202ENST00000504881 C12orf10Q9HB07 376 aa1.92□□□□□ -2.1
SRFBP1-202ENST00000504881 UFSP2Q9NUQ7 469 aa1.92□□□□□ -2.1
SRFBP1-202ENST00000504881 PIPOXQ9P0Z9 390 aa1.92□□□□□ -2.1
SRFBP1-202ENST00000504881 KCNIP3Q9Y2W7 256 aa1.92□□□□□ -2.1
SRFBP1-202ENST00000504881 KIF3AQ9Y496 699 aa1.92□□□□□ -2.1
SRFBP1-202ENST00000504881 CEMIPQ8WUJ3 1361 aa1.91□□□□□ -2.1
SRFBP1-202ENST00000504881 IGKV3D-11A0A0A0MRZ8 115 aa1.91□□□□□ -2.1
SRFBP1-202ENST00000504881 IGKV1D-13A0A0B4J2D9 117 aa1.91□□□□□ -2.1
SRFBP1-202ENST00000504881 A0A1B0GVI7 797 aa1.91□□□□□ -2.1
SRFBP1-202ENST00000504881 RAD51BO15315 384 aa1.91□□□□□ -2.1
SRFBP1-202ENST00000504881 PRKAB2O43741 272 aa1.91□□□□□ -2.1
SRFBP1-202ENST00000504881 RAMP3O60896 148 aa1.91□□□□□ -2.1
SRFBP1-202ENST00000504881 SLC25A14O95258 325 aaPredicted RBP1.91□□□□□ -2.1
SRFBP1-202ENST00000504881 HSMCR30P0CW71 290 aa1.91□□□□□ -2.1
SRFBP1-202ENST00000504881 IGKV1-13P0DP09 117 aa1.91□□□□□ -2.1
SRFBP1-202ENST00000504881 FOLR1P15328 257 aa1.91□□□□□ -2.1
SRFBP1-202ENST00000504881 TCN1P20061 433 aaPredicted RBP1.91□□□□□ -2.1
SRFBP1-202ENST00000504881 DRD5P21918 477 aa1.91□□□□□ -2.1
SRFBP1-202ENST00000504881 GPR6P46095 362 aaPredicted RBP1.91□□□□□ -2.1
SRFBP1-202ENST00000504881 NPBWR2P48146 333 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms