RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, human

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDLIM5-208	ENST00000504489	SLC35D2	Q76EJ3	337 aa		10.51	□□□□□ -0.73
PDLIM5-208	ENST00000504489	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	10.51	□□□□□ -0.73
PDLIM5-208	ENST00000504489	TMEM179B	Q7Z7N9	219 aa		10.51	□□□□□ -0.73
PDLIM5-208	ENST00000504489	DMRTC2	Q8IXT2	367 aa	Predicted RBP	10.51	□□□□□ -0.73
PDLIM5-208	ENST00000504489	TMEM123	Q8N131	208 aa		10.51	□□□□□ -0.73
PDLIM5-208	ENST00000504489	UBE2J2	Q8N2K1	259 aa		10.51	□□□□□ -0.73
PDLIM5-208	ENST00000504489	LRRC75A	Q8NAA5	344 aa		10.51	□□□□□ -0.73
PDLIM5-208	ENST00000504489	OR9Q2	Q8NGE9	314 aa		10.51	□□□□□ -0.73
PDLIM5-208	ENST00000504489	OR6X1	Q8NH79	312 aa		10.51	□□□□□ -0.73
PDLIM5-208	ENST00000504489	GIPC3	Q8TF64	312 aa		10.51	□□□□□ -0.73
PDLIM5-208	ENST00000504489	TXNDC15	Q96J42	360 aa		10.51	□□□□□ -0.73
PDLIM5-208	ENST00000504489	LRR1	Q96L50	414 aa		10.51	□□□□□ -0.73
PDLIM5-208	ENST00000504489	OR2M2	Q96R28	347 aa		10.51	□□□□□ -0.73
PDLIM5-208	ENST00000504489	BDH2	Q9BUT1	245 aa		10.51	□□□□□ -0.73
PDLIM5-208	ENST00000504489	EMC6	Q9BV81	110 aa		10.51	□□□□□ -0.73
PDLIM5-208	ENST00000504489	HDHD5	Q9BXW7	423 aa		10.51	□□□□□ -0.73
PDLIM5-208	ENST00000504489	DGCR6L	Q9BY27	220 aa		10.51	□□□□□ -0.73
PDLIM5-208	ENST00000504489	NDEL1	Q9GZM8	345 aa		10.51	□□□□□ -0.73
PDLIM5-208	ENST00000504489	MCCC2	Q9HCC0	563 aa		10.51	□□□□□ -0.73
PDLIM5-208	ENST00000504489	SLC7A10	Q9NS82	523 aa		10.51	□□□□□ -0.73
PDLIM5-208	ENST00000504489	ASB6	Q9NWX5	421 aa		10.51	□□□□□ -0.73
PDLIM5-208	ENST00000504489	MED29	Q9NX70	200 aa		10.51	□□□□□ -0.73
PDLIM5-208	ENST00000504489	UPB1	Q9UBR1	384 aa		10.51	□□□□□ -0.73
PDLIM5-208	ENST00000504489	MGAT4B	Q9UQ53	548 aa		10.51	□□□□□ -0.73
PDLIM5-208	ENST00000504489	CRYBG3	Q68DQ2	2970 aa		10.5	□□□□□ -0.73
PDLIM5-208	ENST00000504489	CAD	P27708	2225 aa		10.5	□□□□□ -0.73
PDLIM5-208	ENST00000504489	RTTN	Q86VV8	2226 aa		10.5	□□□□□ -0.73
PDLIM5-208	ENST00000504489	C16orf97	H3BN30	126 aa		10.5	□□□□□ -0.73
PDLIM5-208	ENST00000504489	PDLIM1	O00151	329 aa		10.5	□□□□□ -0.73
PDLIM5-208	ENST00000504489	SLC43A1	O75387	559 aa		10.5	□□□□□ -0.73
PDLIM5-208	ENST00000504489	E2F6	O75461	281 aa		10.5	□□□□□ -0.73
PDLIM5-208	ENST00000504489	SERPINI2	O75830	405 aa		10.5	□□□□□ -0.73
PDLIM5-208	ENST00000504489	NDUFB2	O95178	105 aa		10.5	□□□□□ -0.73
PDLIM5-208	ENST00000504489	ADA	P00813	363 aa		10.5	□□□□□ -0.73
PDLIM5-208	ENST00000504489	GAST	P01350	101 aa		10.5	□□□□□ -0.73
PDLIM5-208	ENST00000504489	IGHM	P01871	453 aa		10.5	□□□□□ -0.73
PDLIM5-208	ENST00000504489	CD14	P08571	375 aa		10.5	□□□□□ -0.73
PDLIM5-208	ENST00000504489	ZNF26	P17031	533 aa	Predicted RBP	10.5	□□□□□ -0.73
PDLIM5-208	ENST00000504489	COX5A	P20674	150 aa		10.5	□□□□□ -0.73
PDLIM5-208	ENST00000504489	IGHV1-2	P23083	117 aa		10.5	□□□□□ -0.73
PDLIM5-208	ENST00000504489	UGT2B10	P36537	528 aa		10.5	□□□□□ -0.73
PDLIM5-208	ENST00000504489	BID	P55957	195 aa		10.5	□□□□□ -0.73
PDLIM5-208	ENST00000504489	FXYD6P3	P58550	94 aa		10.5	□□□□□ -0.73
PDLIM5-208	ENST00000504489	CTXN1	P60606	82 aa		10.5	□□□□□ -0.73
PDLIM5-208	ENST00000504489	FAP	Q12884	760 aa		10.5	□□□□□ -0.73
PDLIM5-208	ENST00000504489	ITGAD	Q13349	1161 aa		10.5	□□□□□ -0.73
PDLIM5-208	ENST00000504489	ACKR1	Q16570	336 aa		10.5	□□□□□ -0.73
PDLIM5-208	ENST00000504489	SFRP5	Q5T4F7	317 aa		10.5	□□□□□ -0.73
PDLIM5-208	ENST00000504489	SP5	Q6BEB4	398 aa	Predicted RBP	10.5	□□□□□ -0.73
PDLIM5-208	ENST00000504489	SMARCD3	Q6STE5	483 aa		10.5	□□□□□ -0.73
PDLIM5-208	ENST00000504489	HDDC2	Q7Z4H3	204 aa		10.5	□□□□□ -0.73
PDLIM5-208	ENST00000504489	ABHD12B	Q7Z5M8	362 aa	Predicted RBP	10.5	□□□□□ -0.73
PDLIM5-208	ENST00000504489	CXorf67	Q86X51	503 aa	Predicted RBP	10.5	□□□□□ -0.73
PDLIM5-208	ENST00000504489	C20orf196	Q8IYI0	205 aa		10.5	□□□□□ -0.73
PDLIM5-208	ENST00000504489	AQP11	Q8NBQ7	271 aa		10.5	□□□□□ -0.73
PDLIM5-208	ENST00000504489	OR10G2	Q8NGC3	310 aa		10.5	□□□□□ -0.73
PDLIM5-208	ENST00000504489	PYDC1	Q8WXC3	89 aa		10.5	□□□□□ -0.73
PDLIM5-208	ENST00000504489	ASB10	Q8WXI3	467 aa		10.5	□□□□□ -0.73
PDLIM5-208	ENST00000504489	SLC25A44	Q96H78	314 aa	Predicted RBP	10.5	□□□□□ -0.73
PDLIM5-208	ENST00000504489	GPX7	Q96SL4	187 aa	Predicted RBP	10.5	□□□□□ -0.73
PDLIM5-208	ENST00000504489	SPOCK3	Q9BQ16	436 aa		10.5	□□□□□ -0.73
PDLIM5-208	ENST00000504489	OR10A4	Q9H209	315 aa		10.5	□□□□□ -0.73
PDLIM5-208	ENST00000504489	TXNIP	Q9H3M7	391 aa		10.5	□□□□□ -0.73
PDLIM5-208	ENST00000504489	STX18	Q9P2W9	335 aa	Known RBP	10.5	□□□□□ -0.73
PDLIM5-208	ENST00000504489	GPR52	Q9Y2T5	361 aa		10.5	□□□□□ -0.73
PDLIM5-208	ENST00000504489	CENPBD1	B2RD01	187 aa		10.49	□□□□□ -0.73
PDLIM5-208	ENST00000504489	MCIDAS	D6RGH6	385 aa		10.49	□□□□□ -0.73
PDLIM5-208	ENST00000504489		H3BNX3	289 aa		10.49	□□□□□ -0.73
PDLIM5-208	ENST00000504489	RPL36A-HNRNPH2	H7BZ11	118 aa		10.49	□□□□□ -0.73
PDLIM5-208	ENST00000504489	UPK3A	O75631	287 aa		10.49	□□□□□ -0.73
PDLIM5-208	ENST00000504489	IGHV3-9	P01782	118 aa		10.49	□□□□□ -0.73
PDLIM5-208	ENST00000504489	GSTM3	P21266	225 aa		10.49	□□□□□ -0.73
PDLIM5-208	ENST00000504489	MPG	P29372	298 aa		10.49	□□□□□ -0.73
PDLIM5-208	ENST00000504489	RPL4	P36578	427 aa	Known RBP	10.49	□□□□□ -0.73
PDLIM5-208	ENST00000504489	ARHGDIA	P52565	204 aa		10.49	□□□□□ -0.73
PDLIM5-208	ENST00000504489	RPL27	P61353	136 aa	Known RBP	10.49	□□□□□ -0.73
PDLIM5-208	ENST00000504489	COX10	Q12887	443 aa		10.49	□□□□□ -0.73
PDLIM5-208	ENST00000504489	CAMK2D	Q13557	499 aa		10.49	□□□□□ -0.73
PDLIM5-208	ENST00000504489	RFX4	Q33E94	735 aa		10.49	□□□□□ -0.73
PDLIM5-208	ENST00000504489	ARMC4	Q5T2S8	1044 aa		10.49	□□□□□ -0.73
PDLIM5-208	ENST00000504489	FAM205BP	Q63HN1	556 aa		10.49	□□□□□ -0.73
PDLIM5-208	ENST00000504489	SHQ1	Q6PI26	577 aa	Known RBP	10.49	□□□□□ -0.73
PDLIM5-208	ENST00000504489	CD300LD	Q6UXZ3	194 aa		10.49	□□□□□ -0.73
PDLIM5-208	ENST00000504489	MEX3B	Q6ZN04	569 aa	Known RBP	10.49	□□□□□ -0.73
PDLIM5-208	ENST00000504489	RASSF6	Q6ZTQ3	369 aa		10.49	□□□□□ -0.73
PDLIM5-208	ENST00000504489	WDFY1	Q8IWB7	410 aa		10.49	□□□□□ -0.73
PDLIM5-208	ENST00000504489	GPR137C	Q8N3F9	429 aa		10.49	□□□□□ -0.73
PDLIM5-208	ENST00000504489	ZNF433	Q8N7K0	673 aa	Predicted RBP	10.49	□□□□□ -0.73
PDLIM5-208	ENST00000504489	STEAP2	Q8NFT2	490 aa		10.49	□□□□□ -0.73
PDLIM5-208	ENST00000504489	OR5K1	Q8NHB7	308 aa		10.49	□□□□□ -0.73
PDLIM5-208	ENST00000504489	LRTOMT	Q8WZ04	291 aa		10.49	□□□□□ -0.73
PDLIM5-208	ENST00000504489	TMEM54	Q969K7	222 aa		10.49	□□□□□ -0.73
PDLIM5-208	ENST00000504489	FEV	Q99581	238 aa		10.49	□□□□□ -0.73
PDLIM5-208	ENST00000504489	KATNB1	Q9BVA0	655 aa		10.49	□□□□□ -0.73
PDLIM5-208	ENST00000504489	OR52D1	Q9H346	318 aa		10.49	□□□□□ -0.73
PDLIM5-208	ENST00000504489	TAS2R16	Q9NYV7	291 aa		10.49	□□□□□ -0.73
PDLIM5-208	ENST00000504489	IL20	Q9NYY1	176 aa		10.49	□□□□□ -0.73
PDLIM5-208	ENST00000504489	PDP1	Q9P0J1	537 aa	Predicted RBP	10.49	□□□□□ -0.73
PDLIM5-208	ENST00000504489	ZNF346	Q9UL40	294 aa	Known RBP	10.49	□□□□□ -0.73
PDLIM5-208	ENST00000504489	ZNF587B	E7ETH6	402 aa		10.48	□□□□□ -0.73

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