RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 MGAQ8IWI9 3026 aa6.16□□□□□ -1.42
TOPBP1-203ENST00000503464 IGLV1-36A0A0B4J1U3 117 aa6.16□□□□□ -1.42
TOPBP1-203ENST00000503464 IGHV3-15A0A0B4J1V0 119 aa6.16□□□□□ -1.42
TOPBP1-203ENST00000503464 IGKV1D-43A0A0B4J1Z2 117 aa6.16□□□□□ -1.42
TOPBP1-203ENST00000503464 FAM171A2A8MVW0 826 aa6.16□□□□□ -1.42
TOPBP1-203ENST00000503464 ZNF99A8MXY4 864 aaPredicted RBP6.16□□□□□ -1.42
TOPBP1-203ENST00000503464 PRR32B1ATL7 298 aa6.16□□□□□ -1.42
TOPBP1-203ENST00000503464 H3BSA7 217 aa6.16□□□□□ -1.42
TOPBP1-203ENST00000503464 SULT2B1O00204 365 aa6.16□□□□□ -1.42
TOPBP1-203ENST00000503464 TAF4O00268 1085 aa6.16□□□□□ -1.42
TOPBP1-203ENST00000503464 TRAPPC6AO75865 159 aa6.16□□□□□ -1.42
TOPBP1-203ENST00000503464 RAB36O95755 333 aa6.16□□□□□ -1.42
TOPBP1-203ENST00000503464 GPANK1O95872 356 aa6.16□□□□□ -1.42
TOPBP1-203ENST00000503464 IFNGP01579 166 aa6.16□□□□□ -1.42
TOPBP1-203ENST00000503464 ADRB1P08588 477 aa6.16□□□□□ -1.42
TOPBP1-203ENST00000503464 MRPL3P09001 348 aaKnown RBP6.16□□□□□ -1.42
TOPBP1-203ENST00000503464 IFNGR1P15260 489 aa6.16□□□□□ -1.42
TOPBP1-203ENST00000503464 ENPP1P22413 925 aa6.16□□□□□ -1.42
TOPBP1-203ENST00000503464 AHCYP23526 432 aa6.16□□□□□ -1.42
TOPBP1-203ENST00000503464 FKBP2P26885 142 aaKnown RBP6.16□□□□□ -1.42
TOPBP1-203ENST00000503464 ACVR1BP36896 505 aa6.16□□□□□ -1.42
TOPBP1-203ENST00000503464 PPIAP62937 165 aaKnown RBP6.16□□□□□ -1.42
TOPBP1-203ENST00000503464 SLC35A1P78382 337 aa6.16□□□□□ -1.42
TOPBP1-203ENST00000503464 HSF1Q00613 529 aa6.16□□□□□ -1.42
TOPBP1-203ENST00000503464 POU3F1Q03052 451 aaPredicted RBP6.16□□□□□ -1.42
TOPBP1-203ENST00000503464 MFSD13AQ14CX5 517 aa6.16□□□□□ -1.42
TOPBP1-203ENST00000503464 KLHL12Q53G59 568 aa6.16□□□□□ -1.42
TOPBP1-203ENST00000503464 EEF1A1P5Q5VTE0 462 aa6.16□□□□□ -1.42
TOPBP1-203ENST00000503464 BORAQ6PGQ7 559 aa6.16□□□□□ -1.42
TOPBP1-203ENST00000503464 IGFL3Q6UXB1 125 aa6.16□□□□□ -1.42
TOPBP1-203ENST00000503464 SLC16A12Q6ZSM3 486 aa6.16□□□□□ -1.42
TOPBP1-203ENST00000503464 ASB18Q6ZVZ8 466 aa6.16□□□□□ -1.42
TOPBP1-203ENST00000503464 SSX6Q7RTT6 188 aa6.16□□□□□ -1.42
TOPBP1-203ENST00000503464 PXKQ7Z7A4 578 aa6.16□□□□□ -1.42
TOPBP1-203ENST00000503464 PM20D2Q8IYS1 436 aa6.16□□□□□ -1.42
TOPBP1-203ENST00000503464 OR6V1Q8N148 313 aa6.16□□□□□ -1.42
TOPBP1-203ENST00000503464 FAM109AQ8N4B1 249 aa6.16□□□□□ -1.42
TOPBP1-203ENST00000503464 SVOPQ8N4V2 548 aa6.16□□□□□ -1.42
TOPBP1-203ENST00000503464 NANOGP1Q8N7R0 232 aa6.16□□□□□ -1.42
TOPBP1-203ENST00000503464 OR51G2Q8NGK0 314 aa6.16□□□□□ -1.42
TOPBP1-203ENST00000503464 TM9SF4Q92544 642 aa6.16□□□□□ -1.42
TOPBP1-203ENST00000503464 OTULINQ96BN8 352 aa6.16□□□□□ -1.42
TOPBP1-203ENST00000503464 ZMYND19Q96E35 227 aaPredicted RBP6.16□□□□□ -1.42
TOPBP1-203ENST00000503464 YIPF6Q96EC8 236 aa6.16□□□□□ -1.42
TOPBP1-203ENST00000503464 ZNF845Q96IR2 970 aaPredicted RBP6.16□□□□□ -1.42
TOPBP1-203ENST00000503464 KCNK17Q96T54 332 aa6.16□□□□□ -1.42
TOPBP1-203ENST00000503464 TUBA1CQ9BQE3 449 aa6.16□□□□□ -1.42
TOPBP1-203ENST00000503464 TEX12Q9BXU0 123 aa6.16□□□□□ -1.42
TOPBP1-203ENST00000503464 TSPAN10Q9H1Z9 355 aaPredicted RBP6.16□□□□□ -1.42
TOPBP1-203ENST00000503464 SYT4Q9H2B2 425 aa6.16□□□□□ -1.42
TOPBP1-203ENST00000503464 ZDHHC11Q9H8X9 412 aa6.16□□□□□ -1.42
TOPBP1-203ENST00000503464 RPRD1BQ9NQG5 326 aaKnown RBP6.16□□□□□ -1.42
TOPBP1-203ENST00000503464 HAO2Q9NYQ3 351 aa6.16□□□□□ -1.42
TOPBP1-203ENST00000503464 SPRR3Q9UBC9 169 aa6.16□□□□□ -1.42
TOPBP1-203ENST00000503464 GRHPRQ9UBQ7 328 aa6.16□□□□□ -1.42
TOPBP1-203ENST00000503464 B4GALT7Q9UBV7 327 aa6.16□□□□□ -1.42
TOPBP1-203ENST00000503464 WARS2Q9UGM6 360 aaKnown RBP6.16□□□□□ -1.42
TOPBP1-203ENST00000503464 ING1Q9UK53 422 aaPredicted RBP6.16□□□□□ -1.42
TOPBP1-203ENST00000503464 PCDHGA9Q9Y5G4 932 aaKnown RBP6.16□□□□□ -1.42
TOPBP1-203ENST00000503464 SNX5Q9Y5X3 404 aa6.16□□□□□ -1.42
TOPBP1-203ENST00000503464 URB1O60287 2271 aaKnown RBP6.16□□□□□ -1.42
TOPBP1-203ENST00000503464 ARHGAP21Q5T5U3 1957 aa6.16□□□□□ -1.42
TOPBP1-203ENST00000503464 CACNA1AO00555 2505 aa6.16□□□□□ -1.42
TOPBP1-203ENST00000503464 LOC102725191A0A1B0GVB3 256 aa6.15□□□□□ -1.42
TOPBP1-203ENST00000503464 SMIM31A0A1B0GVY4 71 aa6.15□□□□□ -1.42
TOPBP1-203ENST00000503464 A0A1W2PRG6 482 aa6.15□□□□□ -1.42
TOPBP1-203ENST00000503464 SLC22A23A1A5C7 686 aa6.15□□□□□ -1.42
TOPBP1-203ENST00000503464 PRSS37A4D1T9 235 aa6.15□□□□□ -1.42
TOPBP1-203ENST00000503464 SLC22A31A6NKX4 558 aa6.15□□□□□ -1.42
TOPBP1-203ENST00000503464 ZNF716A6NP11 495 aa6.15□□□□□ -1.42
TOPBP1-203ENST00000503464 KLRC4-KLRK1H3BQV0 150 aa6.15□□□□□ -1.42
TOPBP1-203ENST00000503464 K7ENP7 123 aa6.15□□□□□ -1.42
TOPBP1-203ENST00000503464 EIF1AYO14602 144 aaKnown RBP6.15□□□□□ -1.42
TOPBP1-203ENST00000503464 LRRTM2O43300 516 aa6.15□□□□□ -1.42
TOPBP1-203ENST00000503464 SEC14L5O43304 696 aa6.15□□□□□ -1.42
TOPBP1-203ENST00000503464 ARHGEF9O43307 516 aa6.15□□□□□ -1.42
TOPBP1-203ENST00000503464 CXCL13O43927 109 aa6.15□□□□□ -1.42
TOPBP1-203ENST00000503464 SELENOFO60613 162 aa6.15□□□□□ -1.42
TOPBP1-203ENST00000503464 TRMUO75648 421 aaKnown RBP6.15□□□□□ -1.42
TOPBP1-203ENST00000503464 GLCEO94923 617 aa6.15□□□□□ -1.42
TOPBP1-203ENST00000503464 OR6A2O95222 327 aa6.15□□□□□ -1.42
TOPBP1-203ENST00000503464 LALBAP00709 142 aa6.15□□□□□ -1.42
TOPBP1-203ENST00000503464 SBK2P0C263 348 aa6.15□□□□□ -1.42
TOPBP1-203ENST00000503464 CTLA4P16410 223 aa6.15□□□□□ -1.42
TOPBP1-203ENST00000503464 ZNF708P17019 499 aa6.15□□□□□ -1.42
TOPBP1-203ENST00000503464 POU3F2P20265 443 aaPredicted RBP6.15□□□□□ -1.42
TOPBP1-203ENST00000503464 PAICSP22234 425 aaKnown RBP6.15□□□□□ -1.42
TOPBP1-203ENST00000503464 DCKP27707 260 aa6.15□□□□□ -1.42
TOPBP1-203ENST00000503464 GTF2E2P29084 291 aaKnown RBP6.15□□□□□ -1.42
TOPBP1-203ENST00000503464 NTF4P34130 210 aa6.15□□□□□ -1.42
TOPBP1-203ENST00000503464 LIPAP38571 399 aa6.15□□□□□ -1.42
TOPBP1-203ENST00000503464 AGFG1P52594 562 aaKnown RBP6.15□□□□□ -1.42
TOPBP1-203ENST00000503464 HCCSP53701 268 aa6.15□□□□□ -1.42
TOPBP1-203ENST00000503464 BIDP55957 195 aa6.15□□□□□ -1.42
TOPBP1-203ENST00000503464 PLGLB1Q02325 96 aa6.15□□□□□ -1.42
TOPBP1-203ENST00000503464 ZNF85Q03923 595 aa6.15□□□□□ -1.42
TOPBP1-203ENST00000503464 FMODQ06828 376 aa6.15□□□□□ -1.42
TOPBP1-203ENST00000503464 TMED1Q13445 227 aa6.15□□□□□ -1.42
TOPBP1-203ENST00000503464 SLC17A1Q14916 467 aa6.15□□□□□ -1.42
TOPBP1-203ENST00000503464 POU4F3Q15319 338 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms