RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 FHL1Q13642 323 aa15.98■□□□□ 0.15
PDLIM7-209ENST00000503346 LAPTM4AQ15012 233 aa15.98■□□□□ 0.15
PDLIM7-209ENST00000503346 NCMAPQ5T1S8 102 aa15.98■□□□□ 0.15
PDLIM7-209ENST00000503346 MEX3DQ86XN8 651 aaKnown RBP15.98■□□□□ 0.15
PDLIM7-209ENST00000503346 ZDHHC21Q8IVQ6 265 aa15.98■□□□□ 0.15
PDLIM7-209ENST00000503346 MAGEE2Q8TD90 523 aaPredicted RBP15.98■□□□□ 0.15
PDLIM7-209ENST00000503346 BCL2L2Q92843 193 aaPredicted RBP15.98■□□□□ 0.15
PDLIM7-209ENST00000503346 SLC25A44Q96H78 314 aaPredicted RBP15.98■□□□□ 0.15
PDLIM7-209ENST00000503346 TEX15Q9BXT5 2789 aa15.98■□□□□ 0.15
PDLIM7-209ENST00000503346 ESRP2Q9H6T0 727 aaKnown RBP15.98■□□□□ 0.15
PDLIM7-209ENST00000503346 OBP2BQ9NPH6 170 aa15.98■□□□□ 0.15
PDLIM7-209ENST00000503346 B3GAT2Q9NPZ5 323 aa15.98■□□□□ 0.15
PDLIM7-209ENST00000503346 NPAP1Q9NZP6 1156 aa15.98■□□□□ 0.15
PDLIM7-209ENST00000503346 LRBAP50851 2863 aa15.98■□□□□ 0.15
PDLIM7-209ENST00000503346 PDZD2O15018 2839 aa15.98■□□□□ 0.15
PDLIM7-209ENST00000503346 CSMD2Q7Z408 3487 aa15.98■□□□□ 0.15
PDLIM7-209ENST00000503346 DPRXA6NFQ7 191 aa15.97■□□□□ 0.15
PDLIM7-209ENST00000503346 M0R3G1 203 aa15.97■□□□□ 0.15
PDLIM7-209ENST00000503346 CDC42EP2O14613 210 aa15.97■□□□□ 0.15
PDLIM7-209ENST00000503346 DNAJC8O75937 253 aaPredicted RBP15.97■□□□□ 0.15
PDLIM7-209ENST00000503346 GADD45GO95257 159 aa15.97■□□□□ 0.15
PDLIM7-209ENST00000503346 BCL10O95999 233 aa15.97■□□□□ 0.15
PDLIM7-209ENST00000503346 HOXB1P14653 301 aaPredicted RBP15.97■□□□□ 0.15
PDLIM7-209ENST00000503346 HOXC12P31275 282 aa15.97■□□□□ 0.15
PDLIM7-209ENST00000503346 OMPP47874 163 aa15.97■□□□□ 0.15
PDLIM7-209ENST00000503346 CSNK1A1P48729 337 aa15.97■□□□□ 0.15
PDLIM7-209ENST00000503346 DAP3P51398 398 aaKnown RBP15.97■□□□□ 0.15
PDLIM7-209ENST00000503346 SPIBQ01892 262 aa15.97■□□□□ 0.15
PDLIM7-209ENST00000503346 MELKQ14680 651 aa15.97■□□□□ 0.15
PDLIM7-209ENST00000503346 SEC23BQ15437 767 aa15.97■□□□□ 0.15
PDLIM7-209ENST00000503346 CEACAM16Q2WEN9 425 aa15.97■□□□□ 0.15
PDLIM7-209ENST00000503346 TBRG1Q3YBR2 411 aa15.97■□□□□ 0.15
PDLIM7-209ENST00000503346 HIKESHIQ53FT3 197 aa15.97■□□□□ 0.15
PDLIM7-209ENST00000503346 ALG10Q5BKT4 473 aa15.97■□□□□ 0.15
PDLIM7-209ENST00000503346 ANKRD16Q6P6B7 361 aa15.97■□□□□ 0.15
PDLIM7-209ENST00000503346 OAFQ86UD1 273 aa15.97■□□□□ 0.15
PDLIM7-209ENST00000503346 LRRC75AQ8NAA5 344 aa15.97■□□□□ 0.15
PDLIM7-209ENST00000503346 OR4K5Q8NGD3 323 aa15.97■□□□□ 0.15
PDLIM7-209ENST00000503346 OR13C2Q8NGS9 318 aa15.97■□□□□ 0.15
PDLIM7-209ENST00000503346 OR6N1Q8NGY5 312 aa15.97■□□□□ 0.15
PDLIM7-209ENST00000503346 OR52J3Q8NH60 311 aa15.97■□□□□ 0.15
PDLIM7-209ENST00000503346 ASB10Q8WXI3 467 aa15.97■□□□□ 0.15
PDLIM7-209ENST00000503346 NINJ1Q92982 152 aa15.97■□□□□ 0.15
PDLIM7-209ENST00000503346 TMEM54Q969K7 222 aa15.97■□□□□ 0.15
PDLIM7-209ENST00000503346 ZNF566Q969W8 418 aa15.97■□□□□ 0.15
PDLIM7-209ENST00000503346 ZNF837Q96EG3 531 aaPredicted RBP15.97■□□□□ 0.15
PDLIM7-209ENST00000503346 SEPHS2Q99611 448 aa15.97■□□□□ 0.15
PDLIM7-209ENST00000503346 NELFAQ9H3P2 528 aa15.97■□□□□ 0.15
PDLIM7-209ENST00000503346 LIME1Q9H400 295 aa15.97■□□□□ 0.15
PDLIM7-209ENST00000503346 ST6GALNAC2Q9UJ37 374 aa15.97■□□□□ 0.15
PDLIM7-209ENST00000503346 EDARQ9UNE0 448 aa15.97■□□□□ 0.15
PDLIM7-209ENST00000503346 MAGED1Q9Y5V3 778 aaPredicted RBP15.97■□□□□ 0.15
PDLIM7-209ENST00000503346 ARPC4-TTLL3A0A0A6YYG9 625 aa15.96■□□□□ 0.15
PDLIM7-209ENST00000503346 A0A1W2PR80 420 aa15.96■□□□□ 0.15
PDLIM7-209ENST00000503346 SH3PXD2BA1X283 911 aa15.96■□□□□ 0.15
PDLIM7-209ENST00000503346 ZNF99A8MXY4 864 aaPredicted RBP15.96■□□□□ 0.15
PDLIM7-209ENST00000503346 CENPBD1B2RD01 187 aa15.96■□□□□ 0.15
PDLIM7-209ENST00000503346 ATP5HO75947 161 aa15.96■□□□□ 0.15
PDLIM7-209ENST00000503346 STAMBPO95630 424 aa15.96■□□□□ 0.15
PDLIM7-209ENST00000503346 PGA4P0DJD7 388 aa15.96■□□□□ 0.15
PDLIM7-209ENST00000503346 PGA3P0DJD8 388 aa15.96■□□□□ 0.15
PDLIM7-209ENST00000503346 GPR4P46093 362 aa15.96■□□□□ 0.15
PDLIM7-209ENST00000503346 LIMS1P48059 325 aa15.96■□□□□ 0.15
PDLIM7-209ENST00000503346 PRPS1P60891 318 aa15.96■□□□□ 0.15
PDLIM7-209ENST00000503346 ARF1P84077 181 aaKnown RBP15.96■□□□□ 0.15
PDLIM7-209ENST00000503346 TAF11Q15544 211 aa15.96■□□□□ 0.15
PDLIM7-209ENST00000503346 ACKR1Q16570 336 aa15.96■□□□□ 0.15
PDLIM7-209ENST00000503346 ARMC4Q5T2S8 1044 aa15.96■□□□□ 0.15
PDLIM7-209ENST00000503346 PAMR1Q6UXH9 720 aa15.96■□□□□ 0.15
PDLIM7-209ENST00000503346 ZNF704Q6ZNC4 412 aaPredicted RBP15.96■□□□□ 0.15
PDLIM7-209ENST00000503346 HDDC2Q7Z4H3 204 aa15.96■□□□□ 0.15
PDLIM7-209ENST00000503346 OR51A7Q8NH64 312 aa15.96■□□□□ 0.15
PDLIM7-209ENST00000503346 LRGUKQ96M69 825 aa15.96■□□□□ 0.15
PDLIM7-209ENST00000503346 TNFRSF13CQ96RJ3 184 aa15.96■□□□□ 0.15
PDLIM7-209ENST00000503346 MRPL13Q9BYD1 178 aaKnown RBP15.96■□□□□ 0.15
PDLIM7-209ENST00000503346 ULBP2Q9BZM5 246 aa15.96■□□□□ 0.15
PDLIM7-209ENST00000503346 TRIM15Q9C019 465 aa15.96■□□□□ 0.15
PDLIM7-209ENST00000503346 KRCC1Q9NPI7 259 aaPredicted RBP15.96■□□□□ 0.15
PDLIM7-209ENST00000503346 GLTPQ9NZD2 209 aa15.96■□□□□ 0.15
PDLIM7-209ENST00000503346 STX18Q9P2W9 335 aaKnown RBP15.96■□□□□ 0.15
PDLIM7-209ENST00000503346 HRNRQ86YZ3 2850 aaPredicted RBP15.95■□□□□ 0.14
PDLIM7-209ENST00000503346 ABCA4P78363 2273 aa15.95■□□□□ 0.14
PDLIM7-209ENST00000503346 TRAV27A0A087WT01 109 aa15.95■□□□□ 0.14
PDLIM7-209ENST00000503346 AQP12BA6NM10 295 aa15.95■□□□□ 0.14
PDLIM7-209ENST00000503346 MCIDASD6RGH6 385 aa15.95■□□□□ 0.14
PDLIM7-209ENST00000503346 GSC2O15499 205 aa15.95■□□□□ 0.14
PDLIM7-209ENST00000503346 KRT36O76013 467 aa15.95■□□□□ 0.14
PDLIM7-209ENST00000503346 WNT11O96014 354 aa15.95■□□□□ 0.14
PDLIM7-209ENST00000503346 IGHG1P01857 330 aa15.95■□□□□ 0.14
PDLIM7-209ENST00000503346 IGHMP01871 453 aa15.95■□□□□ 0.14
PDLIM7-209ENST00000503346 CD3EP07766 207 aa15.95■□□□□ 0.14
PDLIM7-209ENST00000503346 PAX7P23759 505 aa15.95■□□□□ 0.14
PDLIM7-209ENST00000503346 RRM2P31350 389 aa15.95■□□□□ 0.14
PDLIM7-209ENST00000503346 RASSF2P50749 326 aa15.95■□□□□ 0.14
PDLIM7-209ENST00000503346 RUNX1T1Q06455 604 aa15.95■□□□□ 0.14
PDLIM7-209ENST00000503346 BSPH1Q075Z2 132 aa15.95■□□□□ 0.14
PDLIM7-209ENST00000503346 HIST3H3Q16695 136 aa15.95■□□□□ 0.14
PDLIM7-209ENST00000503346 FAM98BQ52LJ0 330 aaKnown RBP15.95■□□□□ 0.14
PDLIM7-209ENST00000503346 KLHL24Q6TFL4 600 aa15.95■□□□□ 0.14
PDLIM7-209ENST00000503346 ZNF627Q7L945 461 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms