RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 KCNS3Q9BQ31 491 aa4.78□□□□□ -1.64
SPTA1-209ENST00000498708 UQCC2Q9BRT2 126 aa4.78□□□□□ -1.64
SPTA1-209ENST00000498708 NAA11Q9BSU3 229 aaPredicted RBP4.78□□□□□ -1.64
SPTA1-209ENST00000498708 CCDC106Q9BWC9 280 aa4.78□□□□□ -1.64
SPTA1-209ENST00000498708 BPESC1Q9GZL8 116 aa4.78□□□□□ -1.64
SPTA1-209ENST00000498708 SEC61A2Q9H9S3 476 aa4.78□□□□□ -1.64
SPTA1-209ENST00000498708 TMEM165Q9HC07 324 aa4.78□□□□□ -1.64
SPTA1-209ENST00000498708 EXD2Q9NVH0 621 aa4.78□□□□□ -1.64
SPTA1-209ENST00000498708 ARGLU1Q9NWB6 273 aaPredicted RBP4.78□□□□□ -1.64
SPTA1-209ENST00000498708 PPP1R14DQ9NXH3 145 aa4.78□□□□□ -1.64
SPTA1-209ENST00000498708 TMEM181Q9P2C4 612 aa4.78□□□□□ -1.64
SPTA1-209ENST00000498708 SLC17A7Q9P2U7 560 aa4.78□□□□□ -1.64
SPTA1-209ENST00000498708 CHRNA9Q9UGM1 479 aa4.78□□□□□ -1.64
SPTA1-209ENST00000498708 ZDHHC2Q9UIJ5 367 aa4.78□□□□□ -1.64
SPTA1-209ENST00000498708 MID2Q9UJV3 735 aa4.78□□□□□ -1.64
SPTA1-209ENST00000498708 PAIP2BQ9ULR5 123 aaKnown RBP4.78□□□□□ -1.64
SPTA1-209ENST00000498708 USP22Q9UPT9 525 aa4.78□□□□□ -1.64
SPTA1-209ENST00000498708 COA3Q9Y2R0 106 aaPredicted RBP4.78□□□□□ -1.64
SPTA1-209ENST00000498708 AMDHD2Q9Y303 409 aa4.78□□□□□ -1.64
SPTA1-209ENST00000498708 TMED7Q9Y3B3 224 aa4.78□□□□□ -1.64
SPTA1-209ENST00000498708 WDR45Q9Y484 360 aa4.78□□□□□ -1.64
SPTA1-209ENST00000498708 SNX5Q9Y5X3 404 aa4.78□□□□□ -1.64
SPTA1-209ENST00000498708 FLVCR1Q9Y5Y0 555 aa4.78□□□□□ -1.64
SPTA1-209ENST00000498708 FKBP7Q9Y680 259 aa4.78□□□□□ -1.64
SPTA1-209ENST00000498708 X6R8D5 127 aa4.78□□□□□ -1.64
SPTA1-209ENST00000498708 HEATR1Q9H583 2144 aaKnown RBP4.78□□□□□ -1.64
SPTA1-209ENST00000498708 IGKV3D-15A0A087WSY6 115 aa4.77□□□□□ -1.65
SPTA1-209ENST00000498708 WDR91A4D1P6 747 aa4.77□□□□□ -1.65
SPTA1-209ENST00000498708 DUXAA6NLW8 204 aa4.77□□□□□ -1.65
SPTA1-209ENST00000498708 NDUFS8O00217 210 aa4.77□□□□□ -1.65
SPTA1-209ENST00000498708 GPR171O14626 319 aa4.77□□□□□ -1.65
SPTA1-209ENST00000498708 PMS2P2O95744 297 aa4.77□□□□□ -1.65
SPTA1-209ENST00000498708 LGI1O95970 557 aa4.77□□□□□ -1.65
SPTA1-209ENST00000498708 AK1P00568 194 aa4.77□□□□□ -1.65
SPTA1-209ENST00000498708 FGF4P08620 206 aa4.77□□□□□ -1.65
SPTA1-209ENST00000498708 APEX1P27695 318 aaKnown RBP4.77□□□□□ -1.65
SPTA1-209ENST00000498708 TACR3P29371 465 aa4.77□□□□□ -1.65
SPTA1-209ENST00000498708 ARRB2P32121 409 aa4.77□□□□□ -1.65
SPTA1-209ENST00000498708 DVL1P1P54792 670 aaPredicted RBP4.77□□□□□ -1.65
SPTA1-209ENST00000498708 SLC35A1P78382 337 aa4.77□□□□□ -1.65
SPTA1-209ENST00000498708 KCNJ10P78508 379 aa4.77□□□□□ -1.65
SPTA1-209ENST00000498708 FUT5Q11128 374 aa4.77□□□□□ -1.65
SPTA1-209ENST00000498708 TRAP1Q12931 704 aaKnown RBP4.77□□□□□ -1.65
SPTA1-209ENST00000498708 BNIP2Q12982 314 aa4.77□□□□□ -1.65
SPTA1-209ENST00000498708 CCNIQ14094 377 aa4.77□□□□□ -1.65
SPTA1-209ENST00000498708 PDK3Q15120 406 aa4.77□□□□□ -1.65
SPTA1-209ENST00000498708 OR7A5Q15622 319 aa4.77□□□□□ -1.65
SPTA1-209ENST00000498708 SYPL1Q16563 259 aa4.77□□□□□ -1.65
SPTA1-209ENST00000498708 ZSWIM7Q19AV6 140 aa4.77□□□□□ -1.65
SPTA1-209ENST00000498708 MST1LQ2TV78 715 aa4.77□□□□□ -1.65
SPTA1-209ENST00000498708 TBRG1Q3YBR2 411 aa4.77□□□□□ -1.65
SPTA1-209ENST00000498708 XKR7Q5GH72 579 aa4.77□□□□□ -1.65
SPTA1-209ENST00000498708 OTUD3Q5T2D3 398 aaPredicted RBP4.77□□□□□ -1.65
SPTA1-209ENST00000498708 ATAD3BQ5T9A4 648 aa4.77□□□□□ -1.65
SPTA1-209ENST00000498708 C11orf87Q6NUJ2 197 aa4.77□□□□□ -1.65
SPTA1-209ENST00000498708 PLBD1Q6P4A8 553 aa4.77□□□□□ -1.65
SPTA1-209ENST00000498708 CFAP161Q6P656 301 aa4.77□□□□□ -1.65
SPTA1-209ENST00000498708 EMBQ6PCB8 327 aa4.77□□□□□ -1.65
SPTA1-209ENST00000498708 FRRS1Q6ZNA5 592 aa4.77□□□□□ -1.65
SPTA1-209ENST00000498708 GRINAQ7Z429 371 aa4.77□□□□□ -1.65
SPTA1-209ENST00000498708 RIMKLAQ8IXN7 391 aa4.77□□□□□ -1.65
SPTA1-209ENST00000498708 KDM8Q8N371 416 aa4.77□□□□□ -1.65
SPTA1-209ENST00000498708 CADM2Q8N3J6 435 aa4.77□□□□□ -1.65
SPTA1-209ENST00000498708 ARFGAP2Q8N6H7 521 aa4.77□□□□□ -1.65
SPTA1-209ENST00000498708 ANKFN1Q8N957 763 aa4.77□□□□□ -1.65
SPTA1-209ENST00000498708 ROPN1LQ96C74 230 aa4.77□□□□□ -1.65
SPTA1-209ENST00000498708 DDIT4LQ96D03 193 aa4.77□□□□□ -1.65
SPTA1-209ENST00000498708 APOPT1Q96IL0 206 aa4.77□□□□□ -1.65
SPTA1-209ENST00000498708 SNX18Q96RF0 628 aa4.77□□□□□ -1.65
SPTA1-209ENST00000498708 CGREF1Q99674 301 aa4.77□□□□□ -1.65
SPTA1-209ENST00000498708 SLC6A7Q99884 636 aa4.77□□□□□ -1.65
SPTA1-209ENST00000498708 TXLNGYQ9BZA5 131 aa4.77□□□□□ -1.65
SPTA1-209ENST00000498708 DPY30Q9C005 99 aa4.77□□□□□ -1.65
SPTA1-209ENST00000498708 NMUR2Q9GZQ4 415 aa4.77□□□□□ -1.65
SPTA1-209ENST00000498708 ZNF350Q9GZX5 532 aa4.77□□□□□ -1.65
SPTA1-209ENST00000498708 SLITRK2Q9H156 845 aa4.77□□□□□ -1.65
SPTA1-209ENST00000498708 MMP27Q9H306 513 aa4.77□□□□□ -1.65
SPTA1-209ENST00000498708 NARFLQ9H6Q4 476 aa4.77□□□□□ -1.65
SPTA1-209ENST00000498708 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.77□□□□□ -1.65
SPTA1-209ENST00000498708 FKBP14Q9NWM8 211 aa4.77□□□□□ -1.65
SPTA1-209ENST00000498708 ADPRHL2Q9NX46 363 aa4.77□□□□□ -1.65
SPTA1-209ENST00000498708 MALT1Q9UDY8 824 aa4.77□□□□□ -1.65
SPTA1-209ENST00000498708 OSGIN1Q9UJX0 560 aa4.77□□□□□ -1.65
SPTA1-209ENST00000498708 PCDHGB4Q9UN71 923 aa4.77□□□□□ -1.65
SPTA1-209ENST00000498708 SLC9A8Q9Y2E8 581 aa4.77□□□□□ -1.65
SPTA1-209ENST00000498708 HDGFL3Q9Y3E1 203 aa4.77□□□□□ -1.65
SPTA1-209ENST00000498708 PPIAL4AQ9Y536 164 aa4.77□□□□□ -1.65
SPTA1-209ENST00000498708 HECTD4Q9Y4D8 3996 aa4.77□□□□□ -1.65
SPTA1-209ENST00000498708 LOC390937A0A1W2PQ73 354 aa4.76□□□□□ -1.65
SPTA1-209ENST00000498708 NDUFAB1O14561 156 aa4.76□□□□□ -1.65
SPTA1-209ENST00000498708 ANKRD28O15084 1053 aa4.76□□□□□ -1.65
SPTA1-209ENST00000498708 ITM2AO43736 263 aa4.76□□□□□ -1.65
SPTA1-209ENST00000498708 UPK3AO75631 287 aa4.76□□□□□ -1.65
SPTA1-209ENST00000498708 SEC14L2O76054 403 aa4.76□□□□□ -1.65
SPTA1-209ENST00000498708 PDE5AO76074 875 aa4.76□□□□□ -1.65
SPTA1-209ENST00000498708 CRYAAP02489 173 aa4.76□□□□□ -1.65
SPTA1-209ENST00000498708 OR4A8P0C604 315 aa4.76□□□□□ -1.65
SPTA1-209ENST00000498708 GKN3PP0CG01 181 aa4.76□□□□□ -1.65
SPTA1-209ENST00000498708 PRPS1L1P21108 318 aa4.76□□□□□ -1.65
SPTA1-209ENST00000498708 CBLP22681 906 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms