RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 DPY19L2P2Q6ZN68 376 aa12.04□□□□□ -0.48
CPNE1-227ENST00000498056 NUFIP2Q7Z417 695 aaKnown RBP12.04□□□□□ -0.48
CPNE1-227ENST00000498056 HDDC2Q7Z4H3 204 aa12.04□□□□□ -0.48
CPNE1-227ENST00000498056 JAZF1Q86VZ6 243 aa12.04□□□□□ -0.48
CPNE1-227ENST00000498056 CCDC71Q8IV32 467 aaPredicted RBP12.04□□□□□ -0.48
CPNE1-227ENST00000498056 ZNF100Q8IYN0 542 aa12.04□□□□□ -0.48
CPNE1-227ENST00000498056 PACRGLQ8N7B6 248 aa12.04□□□□□ -0.48
CPNE1-227ENST00000498056 NOXO1Q8NFA2 376 aa12.04□□□□□ -0.48
CPNE1-227ENST00000498056 OR4Q3Q8NH05 313 aa12.04□□□□□ -0.48
CPNE1-227ENST00000498056 NRG4Q8WWG1 115 aa12.04□□□□□ -0.48
CPNE1-227ENST00000498056 TMEM45BQ96B21 275 aa12.04□□□□□ -0.48
CPNE1-227ENST00000498056 APH1AQ96BI3 265 aa12.04□□□□□ -0.48
CPNE1-227ENST00000498056 Q96M85 177 aa12.04□□□□□ -0.48
CPNE1-227ENST00000498056 ALKBH3Q96Q83 286 aaPredicted RBP12.04□□□□□ -0.48
CPNE1-227ENST00000498056 SFXN3Q9BWM7 321 aa12.04□□□□□ -0.48
CPNE1-227ENST00000498056 TXNIPQ9H3M7 391 aa12.04□□□□□ -0.48
CPNE1-227ENST00000498056 NRIP3Q9NQ35 241 aa12.04□□□□□ -0.48
CPNE1-227ENST00000498056 C8orf4Q9NR00 106 aa12.04□□□□□ -0.48
CPNE1-227ENST00000498056 SMPD3Q9NY59 655 aaPredicted RBP12.04□□□□□ -0.48
CPNE1-227ENST00000498056 IL20Q9NYY1 176 aa12.04□□□□□ -0.48
CPNE1-227ENST00000498056 RNF6Q9Y252 685 aa12.04□□□□□ -0.48
CPNE1-227ENST00000498056 RCE1Q9Y256 329 aa12.04□□□□□ -0.48
CPNE1-227ENST00000498056 LOC102725191A0A1B0GVB3 256 aa12.03□□□□□ -0.48
CPNE1-227ENST00000498056 SLC35F4A4IF30 521 aa12.03□□□□□ -0.48
CPNE1-227ENST00000498056 ZNF726A6NNF4 738 aa12.03□□□□□ -0.48
CPNE1-227ENST00000498056 XKRYO14609 159 aa12.03□□□□□ -0.48
CPNE1-227ENST00000498056 SLC43A1O75387 559 aa12.03□□□□□ -0.48
CPNE1-227ENST00000498056 TNFSF13O75888 250 aa12.03□□□□□ -0.48
CPNE1-227ENST00000498056 SNAP29O95721 258 aa12.03□□□□□ -0.48
CPNE1-227ENST00000498056 CRHP06850 196 aa12.03□□□□□ -0.48
CPNE1-227ENST00000498056 PLA2G2AP14555 144 aa12.03□□□□□ -0.48
CPNE1-227ENST00000498056 CTSSP25774 331 aa12.03□□□□□ -0.48
CPNE1-227ENST00000498056 SDHAP31040 664 aa12.03□□□□□ -0.48
CPNE1-227ENST00000498056 KIR2DL2P43627 348 aaPredicted RBP12.03□□□□□ -0.48
CPNE1-227ENST00000498056 PTDSS1P48651 473 aaKnown RBP12.03□□□□□ -0.48
CPNE1-227ENST00000498056 CRISP1P54107 249 aa12.03□□□□□ -0.48
CPNE1-227ENST00000498056 CLRN1P58418 232 aa12.03□□□□□ -0.48
CPNE1-227ENST00000498056 ESRRGP62508 458 aa12.03□□□□□ -0.48
CPNE1-227ENST00000498056 ADORA2A-AS1P86434 159 aa12.03□□□□□ -0.48
CPNE1-227ENST00000498056 CD47Q08722 323 aa12.03□□□□□ -0.48
CPNE1-227ENST00000498056 CAMK2DQ13557 499 aa12.03□□□□□ -0.48
CPNE1-227ENST00000498056 SNCBQ16143 134 aa12.03□□□□□ -0.48
CPNE1-227ENST00000498056 MESTQ5EB52 335 aa12.03□□□□□ -0.48
CPNE1-227ENST00000498056 SLC35F1Q5T1Q4 408 aa12.03□□□□□ -0.48
CPNE1-227ENST00000498056 TMEM236Q5W0B7 351 aa12.03□□□□□ -0.48
CPNE1-227ENST00000498056 FAM205BPQ63HN1 556 aa12.03□□□□□ -0.48
CPNE1-227ENST00000498056 SLC27A4Q6P1M0 643 aa12.03□□□□□ -0.48
CPNE1-227ENST00000498056 FAM122BQ7Z309 247 aa12.03□□□□□ -0.48
CPNE1-227ENST00000498056 UBE2J2Q8N2K1 259 aa12.03□□□□□ -0.48
CPNE1-227ENST00000498056 ZIC4Q8N9L1 334 aa12.03□□□□□ -0.48
CPNE1-227ENST00000498056 SDR9C7Q8NEX9 313 aa12.03□□□□□ -0.48
CPNE1-227ENST00000498056 OR6N1Q8NGY5 312 aa12.03□□□□□ -0.48
CPNE1-227ENST00000498056 ZNF519Q8TB69 540 aa12.03□□□□□ -0.48
CPNE1-227ENST00000498056 ADAD1Q96M93 576 aaKnown RBP12.03□□□□□ -0.48
CPNE1-227ENST00000498056 OR2M2Q96R28 347 aa12.03□□□□□ -0.48
CPNE1-227ENST00000498056 MBOAT4Q96T53 435 aa12.03□□□□□ -0.48
CPNE1-227ENST00000498056 TOR3AQ9H497 397 aa12.03□□□□□ -0.48
CPNE1-227ENST00000498056 COQ3Q9NZJ6 369 aa12.03□□□□□ -0.48
CPNE1-227ENST00000498056 PROCRQ9UNN8 238 aa12.03□□□□□ -0.48
CPNE1-227ENST00000498056 A6NIZ1 184 aa12.02□□□□□ -0.49
CPNE1-227ENST00000498056 NPIPB13A6NJU9 1138 aa12.02□□□□□ -0.49
CPNE1-227ENST00000498056 FAM90A27PA6NNH2 459 aa12.02□□□□□ -0.49
CPNE1-227ENST00000498056 NPIPB4C9JG80 1138 aa12.02□□□□□ -0.49
CPNE1-227ENST00000498056 BHLHE40O14503 412 aa12.02□□□□□ -0.49
CPNE1-227ENST00000498056 DVL2O14641 736 aa12.02□□□□□ -0.49
CPNE1-227ENST00000498056 ARHGEF9O43307 516 aa12.02□□□□□ -0.49
CPNE1-227ENST00000498056 KRT33AO76009 404 aa12.02□□□□□ -0.49
CPNE1-227ENST00000498056 IGHG1P01857 330 aa12.02□□□□□ -0.49
CPNE1-227ENST00000498056 EDNRAP25101 427 aa12.02□□□□□ -0.49
CPNE1-227ENST00000498056 GRK5P34947 590 aa12.02□□□□□ -0.49
CPNE1-227ENST00000498056 CSNK1A1P48729 337 aa12.02□□□□□ -0.49
CPNE1-227ENST00000498056 SMSP52788 366 aa12.02□□□□□ -0.49
CPNE1-227ENST00000498056 RAP1BP61224 184 aa12.02□□□□□ -0.49
CPNE1-227ENST00000498056 RAP1AP62834 184 aa12.02□□□□□ -0.49
CPNE1-227ENST00000498056 LGALS3BPQ08380 585 aa12.02□□□□□ -0.49
CPNE1-227ENST00000498056 NPRL3Q12980 569 aa12.02□□□□□ -0.49
CPNE1-227ENST00000498056 GINS1Q14691 196 aa12.02□□□□□ -0.49
CPNE1-227ENST00000498056 PTGES3Q15185 160 aaKnown RBP12.02□□□□□ -0.49
CPNE1-227ENST00000498056 ARMC4Q5T2S8 1044 aa12.02□□□□□ -0.49
CPNE1-227ENST00000498056 GPR139Q6DWJ6 353 aa12.02□□□□□ -0.49
CPNE1-227ENST00000498056 TFAP2EQ6VUC0 442 aa12.02□□□□□ -0.49
CPNE1-227ENST00000498056 WDFY1Q8IWB7 410 aa12.02□□□□□ -0.49
CPNE1-227ENST00000498056 OR6X1Q8NH79 312 aa12.02□□□□□ -0.49
CPNE1-227ENST00000498056 ZNF566Q969W8 418 aa12.02□□□□□ -0.49
CPNE1-227ENST00000498056 PLEKHA8Q96JA3 519 aa12.02□□□□□ -0.49
CPNE1-227ENST00000498056 TEX12Q9BXU0 123 aa12.02□□□□□ -0.49
CPNE1-227ENST00000498056 PRRG3Q9BZD7 231 aa12.02□□□□□ -0.49
CPNE1-227ENST00000498056 OPN3Q9H1Y3 402 aaPredicted RBP12.02□□□□□ -0.49
CPNE1-227ENST00000498056 SLCO5A1Q9H2Y9 848 aa12.02□□□□□ -0.49
CPNE1-227ENST00000498056 SLC25A19Q9HC21 320 aa12.02□□□□□ -0.49
CPNE1-227ENST00000498056 PRSS50Q9UI38 385 aa12.02□□□□□ -0.49
CPNE1-227ENST00000498056 ZNF346Q9UL40 294 aaKnown RBP12.02□□□□□ -0.49
CPNE1-227ENST00000498056 BAIAP2Q9UQB8 552 aa12.02□□□□□ -0.49
CPNE1-227ENST00000498056 SLC5A6Q9Y289 635 aa12.02□□□□□ -0.49
CPNE1-227ENST00000498056 RIIAD1A6NNX1 92 aa12.01□□□□□ -0.49
CPNE1-227ENST00000498056 M0R129 80 aa12.01□□□□□ -0.49
CPNE1-227ENST00000498056 ZG16O60844 167 aa12.01□□□□□ -0.49
CPNE1-227ENST00000498056 TRMUO75648 421 aaKnown RBP12.01□□□□□ -0.49
CPNE1-227ENST00000498056 PGA4P0DJD7 388 aa12.01□□□□□ -0.49
CPNE1-227ENST00000498056 PGA3P0DJD8 388 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms