RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 TMEM135Q86UB9 458 aa2.75□□□□□ -1.97
SMC4-225ENST00000497203 MFSD6LQ8IWD5 586 aa2.75□□□□□ -1.97
SMC4-225ENST00000497203 FAM71E2Q8N5Q1 922 aa2.75□□□□□ -1.97
SMC4-225ENST00000497203 CCDC54Q8NEL0 328 aa2.75□□□□□ -1.97
SMC4-225ENST00000497203 OR6X1Q8NH79 312 aa2.75□□□□□ -1.97
SMC4-225ENST00000497203 MYDGFQ969H8 173 aa2.75□□□□□ -1.97
SMC4-225ENST00000497203 ZNF414Q96IQ9 312 aa2.75□□□□□ -1.97
SMC4-225ENST00000497203 TSNARE1Q96NA8 513 aa2.75□□□□□ -1.97
SMC4-225ENST00000497203 GPR61Q9BZJ8 451 aa2.75□□□□□ -1.97
SMC4-225ENST00000497203 DEFB127Q9H1M4 99 aa2.75□□□□□ -1.97
SMC4-225ENST00000497203 EML4Q9HC35 981 aaKnown RBP2.75□□□□□ -1.97
SMC4-225ENST00000497203 DAZ3Q9NR90 486 aaKnown RBP2.75□□□□□ -1.97
SMC4-225ENST00000497203 XCL2Q9UBD3 114 aa2.75□□□□□ -1.97
SMC4-225ENST00000497203 GNPTGQ9UJJ9 305 aa2.75□□□□□ -1.97
SMC4-225ENST00000497203 ZNF225Q9UK10 706 aa2.75□□□□□ -1.97
SMC4-225ENST00000497203 CSDC2Q9Y534 153 aaKnown RBP2.75□□□□□ -1.97
SMC4-225ENST00000497203 IGLV3-22A0A075B6J6 115 aa2.74□□□□□ -1.97
SMC4-225ENST00000497203 C9JVG2 144 aa2.74□□□□□ -1.97
SMC4-225ENST00000497203 SGK1O00141 431 aa2.74□□□□□ -1.97
SMC4-225ENST00000497203 KRT14P02533 472 aa2.74□□□□□ -1.97
SMC4-225ENST00000497203 ALDOBP05062 364 aa2.74□□□□□ -1.97
SMC4-225ENST00000497203 PNMA6AP0CW24 399 aaPredicted RBP2.74□□□□□ -1.97
SMC4-225ENST00000497203 TDGF1P13385 188 aa2.74□□□□□ -1.97
SMC4-225ENST00000497203 CRISP2P16562 243 aa2.74□□□□□ -1.97
SMC4-225ENST00000497203 DRD3P35462 400 aa2.74□□□□□ -1.97
SMC4-225ENST00000497203 NUDT1P36639 197 aa2.74□□□□□ -1.97
SMC4-225ENST00000497203 CTRLP40313 264 aa2.74□□□□□ -1.97
SMC4-225ENST00000497203 NPBWR2P48146 333 aa2.74□□□□□ -1.97
SMC4-225ENST00000497203 TDGF1P3P51864 188 aa2.74□□□□□ -1.97
SMC4-225ENST00000497203 ACLYP53396 1101 aa2.74□□□□□ -1.97
SMC4-225ENST00000497203 BEX3Q00994 111 aa2.74□□□□□ -1.97
SMC4-225ENST00000497203 ENPEPQ07075 957 aa2.74□□□□□ -1.97
SMC4-225ENST00000497203 SRSF5Q13243 272 aaKnown RBP2.74□□□□□ -1.97
SMC4-225ENST00000497203 RCN1Q15293 331 aa2.74□□□□□ -1.97
SMC4-225ENST00000497203 C2orf83Q53S99 150 aa2.74□□□□□ -1.97
SMC4-225ENST00000497203 HSP90AB3PQ58FF7 597 aa2.74□□□□□ -1.97
SMC4-225ENST00000497203 COA6Q5JTJ3 125 aaKnown RBP2.74□□□□□ -1.97
SMC4-225ENST00000497203 CNIH2Q6PI25 160 aa2.74□□□□□ -1.97
SMC4-225ENST00000497203 TMEM61Q8N0U2 210 aa2.74□□□□□ -1.97
SMC4-225ENST00000497203 TTC5Q8N0Z6 440 aa2.74□□□□□ -1.97
SMC4-225ENST00000497203 BBS5Q8N3I7 341 aa2.74□□□□□ -1.97
SMC4-225ENST00000497203 B3GNT7Q8NFL0 401 aa2.74□□□□□ -1.97
SMC4-225ENST00000497203 OR7G2Q8NG99 324 aa2.74□□□□□ -1.97
SMC4-225ENST00000497203 OR2G3Q8NGZ4 309 aa2.74□□□□□ -1.97
SMC4-225ENST00000497203 PLPPR1Q8TBJ4 325 aa2.74□□□□□ -1.97
SMC4-225ENST00000497203 MCOLN3Q8TDD5 553 aa2.74□□□□□ -1.97
SMC4-225ENST00000497203 ZNF578Q96N58 590 aaPredicted RBP2.74□□□□□ -1.97
SMC4-225ENST00000497203 OR2M2Q96R28 347 aa2.74□□□□□ -1.97
SMC4-225ENST00000497203 FAM192AQ9GZU8 254 aa2.74□□□□□ -1.97
SMC4-225ENST00000497203 VPS37BQ9H9H4 285 aa2.74□□□□□ -1.97
SMC4-225ENST00000497203 CCL28Q9NRJ3 127 aa2.74□□□□□ -1.97
SMC4-225ENST00000497203 PDS5BQ9NTI5 1447 aa2.74□□□□□ -1.97
SMC4-225ENST00000497203 SCN2AQ99250 2005 aa2.73□□□□□ -1.97
SMC4-225ENST00000497203 A0A0B4J2A0 478 aa2.73□□□□□ -1.97
SMC4-225ENST00000497203 A0A1B0GUA9 196 aa2.73□□□□□ -1.97
SMC4-225ENST00000497203 A0A1W2PNU3 283 aaPredicted RBP2.73□□□□□ -1.97
SMC4-225ENST00000497203 PINLYPA6NC86 204 aa2.73□□□□□ -1.97
SMC4-225ENST00000497203 H3BNH8 94 aa2.73□□□□□ -1.97
SMC4-225ENST00000497203 RNF13O43567 381 aa2.73□□□□□ -1.97
SMC4-225ENST00000497203 EIF3GO75821 320 aaKnown RBP eCLIP2.73□□□□□ -1.97
SMC4-225ENST00000497203 CSF3P09919 207 aa2.73□□□□□ -1.97
SMC4-225ENST00000497203 GKN3PP0CG01 181 aa2.73□□□□□ -1.97
SMC4-225ENST00000497203 NR2C1P13056 603 aa2.73□□□□□ -1.97
SMC4-225ENST00000497203 ZNF24P17028 368 aa2.73□□□□□ -1.97
SMC4-225ENST00000497203 CCNE1P24864 410 aa2.73□□□□□ -1.97
SMC4-225ENST00000497203 FOXN2P32314 431 aa2.73□□□□□ -1.97
SMC4-225ENST00000497203 CUL2Q13617 745 aa2.73□□□□□ -1.97
SMC4-225ENST00000497203 MPPED2Q15777 294 aa2.73□□□□□ -1.97
SMC4-225ENST00000497203 RFX4Q33E94 735 aa2.73□□□□□ -1.97
SMC4-225ENST00000497203 FRMPD2BQ6IN97 320 aa2.73□□□□□ -1.97
SMC4-225ENST00000497203 ACP7Q6ZNF0 438 aa2.73□□□□□ -1.97
SMC4-225ENST00000497203 C19orf35Q6ZS72 473 aa2.73□□□□□ -1.97
SMC4-225ENST00000497203 COX15Q7KZN9 410 aa2.73□□□□□ -1.97
SMC4-225ENST00000497203 CENPQQ7L2Z9 268 aaPredicted RBP2.73□□□□□ -1.97
SMC4-225ENST00000497203 CAMK2N1Q7Z7J9 78 aa2.73□□□□□ -1.97
SMC4-225ENST00000497203 LHFPL3Q86UP9 236 aa2.73□□□□□ -1.97
SMC4-225ENST00000497203 OR4C5Q8NGB2 326 aa2.73□□□□□ -1.97
SMC4-225ENST00000497203 OR4F15Q8NGB8 312 aa2.73□□□□□ -1.97
SMC4-225ENST00000497203 RHEBL1Q8TAI7 183 aa2.73□□□□□ -1.97
SMC4-225ENST00000497203 BLOC1S5Q8TDH9 187 aa2.73□□□□□ -1.97
SMC4-225ENST00000497203 SLC38A4Q969I6 547 aa2.73□□□□□ -1.97
SMC4-225ENST00000497203 CYYR1Q96J86 154 aa2.73□□□□□ -1.97
SMC4-225ENST00000497203 SH3GL3Q99963 347 aa2.73□□□□□ -1.97
SMC4-225ENST00000497203 ABCB10Q9NRK6 738 aa2.73□□□□□ -1.97
SMC4-225ENST00000497203 RAB20Q9NX57 234 aa2.73□□□□□ -1.97
SMC4-225ENST00000497203 NYAP2Q9P242 653 aa2.73□□□□□ -1.97
SMC4-225ENST00000497203 SHPKQ9UHJ6 478 aa2.73□□□□□ -1.97
SMC4-225ENST00000497203 PACSIN2Q9UNF0 486 aaPredicted RBP2.73□□□□□ -1.97
SMC4-225ENST00000497203 USP47Q96K76 1375 aa2.73□□□□□ -1.97
SMC4-225ENST00000497203 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP2.73□□□□□ -1.97
SMC4-225ENST00000497203 A0A0G2JLM5 398 aa2.72□□□□□ -1.97
SMC4-225ENST00000497203 ERVV-1B6SEH8 477 aa2.72□□□□□ -1.97
SMC4-225ENST00000497203 PEX7O00628 323 aa2.72□□□□□ -1.97
SMC4-225ENST00000497203 XKRYO14609 159 aa2.72□□□□□ -1.97
SMC4-225ENST00000497203 ZNF861PO60384 105 aa2.72□□□□□ -1.97
SMC4-225ENST00000497203 TNFSF13O75888 250 aa2.72□□□□□ -1.97
SMC4-225ENST00000497203 CT62P0C5K7 136 aa2.72□□□□□ -1.97
SMC4-225ENST00000497203 TOP1P11387 765 aaKnown RBP2.72□□□□□ -1.97
SMC4-225ENST00000497203 ZNF17P17021 662 aa2.72□□□□□ -1.97
SMC4-225ENST00000497203 ZNF43P17038 809 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms