RNA–Protein interactions for RNA: ENST00000496024.1

CALD1-223, Transcript of caldesmon 1, humanhuman

TSL 4

Gene CALD1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-223ENST00000496024 IGFN1Q86VF2 1251 aa8.63□□□□□ -1.03
CALD1-223ENST00000496024 RNF113BQ8IZP6 322 aaKnown RBP8.63□□□□□ -1.03
CALD1-223ENST00000496024 OR13C2Q8NGS9 318 aa8.63□□□□□ -1.03
CALD1-223ENST00000496024 ASB9Q96DX5 294 aa8.63□□□□□ -1.03
CALD1-223ENST00000496024 ZNF837Q96EG3 531 aaPredicted RBP8.63□□□□□ -1.03
CALD1-223ENST00000496024 FAM46AQ96IP4 442 aaKnown RBP8.63□□□□□ -1.03
CALD1-223ENST00000496024 TNFRSF13CQ96RJ3 184 aa8.63□□□□□ -1.03
CALD1-223ENST00000496024 LINC00470Q9BZP3 86 aa8.63□□□□□ -1.03
CALD1-223ENST00000496024 CRLF2Q9HC73 371 aa8.63□□□□□ -1.03
CALD1-223ENST00000496024 NGBQ9NPG2 151 aa8.63□□□□□ -1.03
CALD1-223ENST00000496024 IL1RAPQ9NPH3 570 aa8.63□□□□□ -1.03
CALD1-223ENST00000496024 INIPQ9NRY2 104 aa8.63□□□□□ -1.03
CALD1-223ENST00000496024 ITGB1BP2Q9UKP3 347 aa8.63□□□□□ -1.03
CALD1-223ENST00000496024 MAP1AP78559 2803 aaPredicted RBP8.63□□□□□ -1.03
CALD1-223ENST00000496024 PLCE1Q9P212 2302 aa8.62□□□□□ -1.03
CALD1-223ENST00000496024 CDC42EP2O14613 210 aa8.62□□□□□ -1.03
CALD1-223ENST00000496024 PLAUP00749 431 aa8.62□□□□□ -1.03
CALD1-223ENST00000496024 IGF2P01344 180 aa8.62□□□□□ -1.03
CALD1-223ENST00000496024 HOXC12P31275 282 aa8.62□□□□□ -1.03
CALD1-223ENST00000496024 SMIM11AP58511 58 aa8.62□□□□□ -1.03
CALD1-223ENST00000496024 CTXN1P60606 82 aa8.62□□□□□ -1.03
CALD1-223ENST00000496024 CBX1P83916 185 aa8.62□□□□□ -1.03
CALD1-223ENST00000496024 MYBPC1Q00872 1141 aa8.62□□□□□ -1.03
CALD1-223ENST00000496024 CHRNB3Q05901 458 aa8.62□□□□□ -1.03
CALD1-223ENST00000496024 PPP1R8Q12972 351 aaKnown RBP8.62□□□□□ -1.03
CALD1-223ENST00000496024 ALG10Q5BKT4 473 aa8.62□□□□□ -1.03
CALD1-223ENST00000496024 KLHL24Q6TFL4 600 aa8.62□□□□□ -1.03
CALD1-223ENST00000496024 CDH24Q86UP0 819 aa8.62□□□□□ -1.03
CALD1-223ENST00000496024 P2RY8Q86VZ1 359 aa8.62□□□□□ -1.03
CALD1-223ENST00000496024 SPATA24Q86W54 205 aa8.62□□□□□ -1.03
CALD1-223ENST00000496024 C20orf196Q8IYI0 205 aa8.62□□□□□ -1.03
CALD1-223ENST00000496024 SYT14Q8NB59 555 aa8.62□□□□□ -1.03
CALD1-223ENST00000496024 OR4K5Q8NGD3 323 aa8.62□□□□□ -1.03
CALD1-223ENST00000496024 OR1K1Q8NGR3 316 aa8.62□□□□□ -1.03
CALD1-223ENST00000496024 DHRS1Q96LJ7 313 aa8.62□□□□□ -1.03
CALD1-223ENST00000496024 MUS81Q96NY9 551 aa8.62□□□□□ -1.03
CALD1-223ENST00000496024 ZNF347Q96SE7 839 aa8.62□□□□□ -1.03
CALD1-223ENST00000496024 USB1Q9BQ65 265 aaKnown RBP8.62□□□□□ -1.03
CALD1-223ENST00000496024 CADM1Q9BY67 442 aaKnown RBP8.62□□□□□ -1.03
CALD1-223ENST00000496024 ULBP2Q9BZM5 246 aa8.62□□□□□ -1.03
CALD1-223ENST00000496024 TRIM15Q9C019 465 aa8.62□□□□□ -1.03
CALD1-223ENST00000496024 ANKRD19PQ9H560 264 aa8.62□□□□□ -1.03
CALD1-223ENST00000496024 UBTD1Q9HAC8 227 aa8.62□□□□□ -1.03
CALD1-223ENST00000496024 B3GAT2Q9NPZ5 323 aa8.62□□□□□ -1.03
CALD1-223ENST00000496024 SLC17A5Q9NRA2 495 aa8.62□□□□□ -1.03
CALD1-223ENST00000496024 NPAP1Q9NZP6 1156 aa8.62□□□□□ -1.03
CALD1-223ENST00000496024 TMCC3Q9ULS5 477 aa8.62□□□□□ -1.03
CALD1-223ENST00000496024 AURKCQ9UQB9 309 aa8.62□□□□□ -1.03
CALD1-223ENST00000496024 TMEM5Q9Y2B1 443 aa8.62□□□□□ -1.03
CALD1-223ENST00000496024 POFUT2Q9Y2G5 429 aa8.62□□□□□ -1.03
CALD1-223ENST00000496024 PLEKHA6Q9Y2H5 1048 aa8.62□□□□□ -1.03
CALD1-223ENST00000496024 DSCAMO60469 2012 aa8.62□□□□□ -1.03
CALD1-223ENST00000496024 CSMD2Q7Z408 3487 aa8.61□□□□□ -1.03
CALD1-223ENST00000496024 SH3PXD2BA1X283 911 aa8.61□□□□□ -1.03
CALD1-223ENST00000496024 HTR3EA5X5Y0 456 aa8.61□□□□□ -1.03
CALD1-223ENST00000496024 DPRXA6NFQ7 191 aa8.61□□□□□ -1.03
CALD1-223ENST00000496024 M0R1B8 84 aa8.61□□□□□ -1.03
CALD1-223ENST00000496024 TNFRSF11BO00300 401 aa8.61□□□□□ -1.03
CALD1-223ENST00000496024 ACOT8O14734 319 aa8.61□□□□□ -1.03
CALD1-223ENST00000496024 GSC2O15499 205 aa8.61□□□□□ -1.03
CALD1-223ENST00000496024 OR10H3O60404 316 aa8.61□□□□□ -1.03
CALD1-223ENST00000496024 CD3EP07766 207 aa8.61□□□□□ -1.03
CALD1-223ENST00000496024 LOXP28300 417 aaPredicted RBP8.61□□□□□ -1.03
CALD1-223ENST00000496024 RPL4P36578 427 aaKnown RBP8.61□□□□□ -1.03
CALD1-223ENST00000496024 CAPZA2P47755 286 aa8.61□□□□□ -1.03
CALD1-223ENST00000496024 SLC9A3P48764 834 aa8.61□□□□□ -1.03
CALD1-223ENST00000496024 RASSF2P50749 326 aa8.61□□□□□ -1.03
CALD1-223ENST00000496024 NR1H2P55055 460 aa8.61□□□□□ -1.03
CALD1-223ENST00000496024 CLRN1P58418 232 aa8.61□□□□□ -1.03
CALD1-223ENST00000496024 UBE2NP61088 152 aaKnown RBP8.61□□□□□ -1.03
CALD1-223ENST00000496024 RUNX1T1Q06455 604 aa8.61□□□□□ -1.03
CALD1-223ENST00000496024 BSPH1Q075Z2 132 aa8.61□□□□□ -1.03
CALD1-223ENST00000496024 TRAP1Q12931 704 aaKnown RBP8.61□□□□□ -1.03
CALD1-223ENST00000496024 FLOT2Q14254 428 aa8.61□□□□□ -1.03
CALD1-223ENST00000496024 ACKR1Q16570 336 aa8.61□□□□□ -1.03
CALD1-223ENST00000496024 TBRG1Q3YBR2 411 aa8.61□□□□□ -1.03
CALD1-223ENST00000496024 ZBED5Q49AG3 693 aa8.61□□□□□ -1.03
CALD1-223ENST00000496024 FAM98BQ52LJ0 330 aaKnown RBP8.61□□□□□ -1.03
CALD1-223ENST00000496024 PGM2L1Q6PCE3 622 aa8.61□□□□□ -1.03
CALD1-223ENST00000496024 ZNF704Q6ZNC4 412 aaPredicted RBP8.61□□□□□ -1.03
CALD1-223ENST00000496024 PIWIL3Q7Z3Z3 882 aaKnown RBP8.61□□□□□ -1.03
CALD1-223ENST00000496024 WDR31Q8NA23 367 aa8.61□□□□□ -1.03
CALD1-223ENST00000496024 C1orf162Q8NEQ5 155 aaPredicted RBP8.61□□□□□ -1.03
CALD1-223ENST00000496024 OR6X1Q8NH79 312 aa8.61□□□□□ -1.03
CALD1-223ENST00000496024 LIPHQ8WWY8 451 aa8.61□□□□□ -1.03
CALD1-223ENST00000496024 BCL2L2Q92843 193 aaPredicted RBP8.61□□□□□ -1.03
CALD1-223ENST00000496024 ZNF566Q969W8 418 aa8.61□□□□□ -1.03
CALD1-223ENST00000496024 SLC25A44Q96H78 314 aaPredicted RBP8.61□□□□□ -1.03
CALD1-223ENST00000496024 ALPK1Q96QP1 1244 aa8.61□□□□□ -1.03
CALD1-223ENST00000496024 ESRP2Q9H6T0 727 aaKnown RBP8.61□□□□□ -1.03
CALD1-223ENST00000496024 PLEKHF2Q9H8W4 249 aa8.61□□□□□ -1.03
CALD1-223ENST00000496024 IL20RAQ9UHF4 553 aa8.61□□□□□ -1.03
CALD1-223ENST00000496024 POMPQ9Y244 141 aa8.61□□□□□ -1.03
CALD1-223ENST00000496024 HIF3AQ9Y2N7 669 aa8.61□□□□□ -1.03
CALD1-223ENST00000496024 SLC25A15Q9Y619 301 aa8.61□□□□□ -1.03
CALD1-223ENST00000496024 ARID1AO14497 2285 aa8.6□□□□□ -1.03
CALD1-223ENST00000496024 DHRS12A0PJE2 317 aa8.6□□□□□ -1.03
CALD1-223ENST00000496024 UNC119BA6NIH7 251 aa8.6□□□□□ -1.03
CALD1-223ENST00000496024 RPL36A-HNRNPH2H7BZ11 118 aa8.6□□□□□ -1.03
CALD1-223ENST00000496024 TRMUO75648 421 aaKnown RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms