RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 GPA33Q99795 319 aa15.11■□□□□ 0.01
HDAC6-235ENST00000495515 EMC6Q9BV81 110 aa15.11■□□□□ 0.01
HDAC6-235ENST00000495515 POLDIP3Q9BY77 421 aaKnown RBP15.11■□□□□ 0.01
HDAC6-235ENST00000495515 SLC7A10Q9NS82 523 aa15.11■□□□□ 0.01
HDAC6-235ENST00000495515 PLEKHB1Q9UF11 243 aaPredicted RBP15.11■□□□□ 0.01
HDAC6-235ENST00000495515 NDRG3Q9UGV2 375 aa15.11■□□□□ 0.01
HDAC6-235ENST00000495515 A6NIZ1 184 aa15.1■□□□□ 0.01
HDAC6-235ENST00000495515 CENPBD1B2RD01 187 aa15.1■□□□□ 0.01
HDAC6-235ENST00000495515 ENTPD5O75356 428 aa15.1■□□□□ 0.01
HDAC6-235ENST00000495515 IGHG1P01857 330 aa15.1■□□□□ 0.01
HDAC6-235ENST00000495515 IGHMP01871 453 aa15.1■□□□□ 0.01
HDAC6-235ENST00000495515 PPP3CBP16298 524 aa15.1■□□□□ 0.01
HDAC6-235ENST00000495515 IL32P24001 234 aa15.1■□□□□ 0.01
HDAC6-235ENST00000495515 EDNRAP25101 427 aa15.1■□□□□ 0.01
HDAC6-235ENST00000495515 SLC6A6P31641 620 aa15.1■□□□□ 0.01
HDAC6-235ENST00000495515 UGT2B10P36537 528 aa15.1■□□□□ 0.01
HDAC6-235ENST00000495515 CSNK1A1P48729 337 aa15.1■□□□□ 0.01
HDAC6-235ENST00000495515 RAP1BP61224 184 aa15.1■□□□□ 0.01
HDAC6-235ENST00000495515 RPL27P61353 136 aaKnown RBP15.1■□□□□ 0.01
HDAC6-235ENST00000495515 RAP1AP62834 184 aa15.1■□□□□ 0.01
HDAC6-235ENST00000495515 CAMK2DQ13557 499 aa15.1■□□□□ 0.01
HDAC6-235ENST00000495515 FHL1Q13642 323 aa15.1■□□□□ 0.01
HDAC6-235ENST00000495515 MELKQ14680 651 aa15.1■□□□□ 0.01
HDAC6-235ENST00000495515 RFX4Q33E94 735 aa15.1■□□□□ 0.01
HDAC6-235ENST00000495515 SFRP5Q5T4F7 317 aa15.1■□□□□ 0.01
HDAC6-235ENST00000495515 CARD17Q5XLA6 110 aa15.1■□□□□ 0.01
HDAC6-235ENST00000495515 SP5Q6BEB4 398 aaPredicted RBP15.1■□□□□ 0.01
HDAC6-235ENST00000495515 HMBOX1Q6NT76 420 aa15.1■□□□□ 0.01
HDAC6-235ENST00000495515 STAC2Q6ZMT1 411 aa15.1■□□□□ 0.01
HDAC6-235ENST00000495515 DPY19L2P2Q6ZN68 376 aa15.1■□□□□ 0.01
HDAC6-235ENST00000495515 RASSF6Q6ZTQ3 369 aa15.1■□□□□ 0.01
HDAC6-235ENST00000495515 CXorf67Q86X51 503 aaPredicted RBP15.1■□□□□ 0.01
HDAC6-235ENST00000495515 ZDHHC13Q8IUH4 622 aa15.1■□□□□ 0.01
HDAC6-235ENST00000495515 C20orf196Q8IYI0 205 aa15.1■□□□□ 0.01
HDAC6-235ENST00000495515 TMEM123Q8N131 208 aa15.1■□□□□ 0.01
HDAC6-235ENST00000495515 LRRC75AQ8NAA5 344 aa15.1■□□□□ 0.01
HDAC6-235ENST00000495515 OR52L1Q8NGH7 329 aa15.1■□□□□ 0.01
HDAC6-235ENST00000495515 ASB10Q8WXI3 467 aa15.1■□□□□ 0.01
HDAC6-235ENST00000495515 LRTOMTQ8WZ04 291 aa15.1■□□□□ 0.01
HDAC6-235ENST00000495515 GTPBP3Q969Y2 492 aaKnown RBP15.1■□□□□ 0.01
HDAC6-235ENST00000495515 GPX7Q96SL4 187 aaPredicted RBP15.1■□□□□ 0.01
HDAC6-235ENST00000495515 FEVQ99581 238 aa15.1■□□□□ 0.01
HDAC6-235ENST00000495515 SPOCK3Q9BQ16 436 aa15.1■□□□□ 0.01
HDAC6-235ENST00000495515 OR10A4Q9H209 315 aa15.1■□□□□ 0.01
HDAC6-235ENST00000495515 OR52D1Q9H346 318 aa15.1■□□□□ 0.01
HDAC6-235ENST00000495515 NTN4Q9HB63 628 aa15.1■□□□□ 0.01
HDAC6-235ENST00000495515 TAS2R16Q9NYV7 291 aa15.1■□□□□ 0.01
HDAC6-235ENST00000495515 GRHPRQ9UBQ7 328 aa15.1■□□□□ 0.01
HDAC6-235ENST00000495515 CDH10Q9Y6N8 788 aa15.1■□□□□ 0.01
HDAC6-235ENST00000495515 CIB4A0PJX0 185 aa15.09■□□□□ 0.01
HDAC6-235ENST00000495515 TUBAL3A6NHL2 446 aa15.09■□□□□ 0.01
HDAC6-235ENST00000495515 G3V2T6 193 aa15.09■□□□□ 0.01
HDAC6-235ENST00000495515 C19orf84I3L1E1 186 aa15.09■□□□□ 0.01
HDAC6-235ENST00000495515 ZNF23P17027 643 aa15.09■□□□□ 0.01
HDAC6-235ENST00000495515 COX5AP20674 150 aa15.09■□□□□ 0.01
HDAC6-235ENST00000495515 GRNP28799 593 aaKnown RBP15.09■□□□□ 0.01
HDAC6-235ENST00000495515 MPGP29372 298 aa15.09■□□□□ 0.01
HDAC6-235ENST00000495515 RPS6KA3P51812 740 aa15.09■□□□□ 0.01
HDAC6-235ENST00000495515 CLRN1P58418 232 aa15.09■□□□□ 0.01
HDAC6-235ENST00000495515 TOP3AQ13472 1001 aaPredicted RBP15.09■□□□□ 0.01
HDAC6-235ENST00000495515 GPR139Q6DWJ6 353 aa15.09■□□□□ 0.01
HDAC6-235ENST00000495515 CD300LDQ6UXZ3 194 aa15.09■□□□□ 0.01
HDAC6-235ENST00000495515 MEX3BQ6ZN04 569 aaKnown RBP15.09■□□□□ 0.01
HDAC6-235ENST00000495515 ZNF620Q6ZNG0 422 aa15.09■□□□□ 0.01
HDAC6-235ENST00000495515 TMEM179BQ7Z7N9 219 aa15.09■□□□□ 0.01
HDAC6-235ENST00000495515 AMIGO2Q86SJ2 522 aa15.09■□□□□ 0.01
HDAC6-235ENST00000495515 IGFN1Q86VF2 1251 aa15.09■□□□□ 0.01
HDAC6-235ENST00000495515 SVOPLQ8N434 492 aa15.09■□□□□ 0.01
HDAC6-235ENST00000495515 CLDN22Q8N7P3 220 aa15.09■□□□□ 0.01
HDAC6-235ENST00000495515 ATG16L2Q8NAA4 619 aa15.09■□□□□ 0.01
HDAC6-235ENST00000495515 FNDC8Q8TC99 324 aa15.09■□□□□ 0.01
HDAC6-235ENST00000495515 DNAJC9Q8WXX5 260 aa15.09■□□□□ 0.01
HDAC6-235ENST00000495515 KATNB1Q9BVA0 655 aa15.09■□□□□ 0.01
HDAC6-235ENST00000495515 ENKD1Q9H0I2 346 aa15.09■□□□□ 0.01
HDAC6-235ENST00000495515 S100A14Q9HCY8 104 aa15.09■□□□□ 0.01
HDAC6-235ENST00000495515 KIF17Q9P2E2 1029 aa15.09■□□□□ 0.01
HDAC6-235ENST00000495515 ICE1Q9Y2F5 2266 aa15.08■□□□□ 0
HDAC6-235ENST00000495515 M0R3G1 203 aa15.08■□□□□ 0
HDAC6-235ENST00000495515 XKRYO14609 159 aa15.08■□□□□ 0
HDAC6-235ENST00000495515 UPK3AO75631 287 aa15.08■□□□□ 0
HDAC6-235ENST00000495515 APEHP13798 732 aaKnown RBP15.08■□□□□ 0
HDAC6-235ENST00000495515 COX6B1P14854 86 aa15.08■□□□□ 0
HDAC6-235ENST00000495515 ACADSP16219 412 aa15.08■□□□□ 0
HDAC6-235ENST00000495515 IGFBP2P18065 325 aa15.08■□□□□ 0
HDAC6-235ENST00000495515 IGHV1-2P23083 117 aa15.08■□□□□ 0
HDAC6-235ENST00000495515 ACVR1BP36896 505 aa15.08■□□□□ 0
HDAC6-235ENST00000495515 KIR2DL3P43628 341 aa15.08■□□□□ 0
HDAC6-235ENST00000495515 SH3BGRP55822 239 aaPredicted RBP15.08■□□□□ 0
HDAC6-235ENST00000495515 ERVK-25P63136 954 aa15.08■□□□□ 0
HDAC6-235ENST00000495515 ARMC4Q5T2S8 1044 aa15.08■□□□□ 0
HDAC6-235ENST00000495515 OR7E24Q6IFN5 339 aa15.08■□□□□ 0
HDAC6-235ENST00000495515 BHLHA15Q7RTS1 189 aaPredicted RBP15.08■□□□□ 0
HDAC6-235ENST00000495515 SSX8Q7RTT4 187 aa15.08■□□□□ 0
HDAC6-235ENST00000495515 DMRTC2Q8IXT2 367 aaPredicted RBP15.08■□□□□ 0
HDAC6-235ENST00000495515 ARIH2OSQ8N7S6 290 aa15.08■□□□□ 0
HDAC6-235ENST00000495515 ALKBH3Q96Q83 286 aaPredicted RBP15.08■□□□□ 0
HDAC6-235ENST00000495515 ULBP2Q9BZM5 246 aa15.08■□□□□ 0
HDAC6-235ENST00000495515 NRIP3Q9NQ35 241 aa15.08■□□□□ 0
HDAC6-235ENST00000495515 GLTPQ9NZD2 209 aa15.08■□□□□ 0
HDAC6-235ENST00000495515 ZNF346Q9UL40 294 aaKnown RBP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms