RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 POFUT2Q9Y2G5 429 aa13.97□□□□□ -0.17
LIME1-209ENST00000494776 TACC2O95359 2948 aa13.97□□□□□ -0.17
LIME1-209ENST00000494776 CCDC168Q8NDH2 2452 aa13.96□□□□□ -0.17
LIME1-209ENST00000494776 A0A087WUU8 490 aa13.96□□□□□ -0.17
LIME1-209ENST00000494776 UBOX5O94941 541 aa13.96□□□□□ -0.17
LIME1-209ENST00000494776 ATE1O95260 518 aa13.96□□□□□ -0.17
LIME1-209ENST00000494776 FABP3P05413 133 aa13.96□□□□□ -0.17
LIME1-209ENST00000494776 DAP3P51398 398 aaKnown RBP13.96□□□□□ -0.17
LIME1-209ENST00000494776 CLRN1P58418 232 aa13.96□□□□□ -0.17
LIME1-209ENST00000494776 SMIM11AP58511 58 aa13.96□□□□□ -0.17
LIME1-209ENST00000494776 LSM11P83369 360 aaKnown RBP eCLIP13.96□□□□□ -0.17
LIME1-209ENST00000494776 SPIBQ01892 262 aa13.96□□□□□ -0.17
LIME1-209ENST00000494776 LAPTM4AQ15012 233 aa13.96□□□□□ -0.17
LIME1-209ENST00000494776 ALG10Q5BKT4 473 aa13.96□□□□□ -0.17
LIME1-209ENST00000494776 PHYHD1Q5SRE7 291 aa13.96□□□□□ -0.17
LIME1-209ENST00000494776 C1QTNF12Q5T7M4 302 aa13.96□□□□□ -0.17
LIME1-209ENST00000494776 ADAM5Q6NVV9 412 aa13.96□□□□□ -0.17
LIME1-209ENST00000494776 PODNL1Q6PEZ8 512 aa13.96□□□□□ -0.17
LIME1-209ENST00000494776 SEZ6L2Q6UXD5 910 aa13.96□□□□□ -0.17
LIME1-209ENST00000494776 NHLRC1Q6VVB1 395 aa13.96□□□□□ -0.17
LIME1-209ENST00000494776 C20orf204Q6ZNR8 217 aa13.96□□□□□ -0.17
LIME1-209ENST00000494776 HDDC2Q7Z4H3 204 aa13.96□□□□□ -0.17
LIME1-209ENST00000494776 TSEN54Q7Z6J9 526 aaKnown RBP13.96□□□□□ -0.17
LIME1-209ENST00000494776 OAFQ86UD1 273 aa13.96□□□□□ -0.17
LIME1-209ENST00000494776 DHFR2Q86XF0 187 aa13.96□□□□□ -0.17
LIME1-209ENST00000494776 DEPDC4Q8N2C3 294 aa13.96□□□□□ -0.17
LIME1-209ENST00000494776 OR52J3Q8NH60 311 aa13.96□□□□□ -0.17
LIME1-209ENST00000494776 MOSPD2Q8NHP6 518 aa13.96□□□□□ -0.17
LIME1-209ENST00000494776 BCL2L2Q92843 193 aaPredicted RBP13.96□□□□□ -0.17
LIME1-209ENST00000494776 SLC25A44Q96H78 314 aaPredicted RBP13.96□□□□□ -0.17
LIME1-209ENST00000494776 TMEM204Q9BSN7 226 aa13.96□□□□□ -0.17
LIME1-209ENST00000494776 THTPAQ9BU02 230 aa13.96□□□□□ -0.17
LIME1-209ENST00000494776 MUC13Q9H3R2 512 aa13.96□□□□□ -0.17
LIME1-209ENST00000494776 OBP2BQ9NPH6 170 aa13.96□□□□□ -0.17
LIME1-209ENST00000494776 KRCC1Q9NPI7 259 aaPredicted RBP13.96□□□□□ -0.17
LIME1-209ENST00000494776 TAS2R1Q9NYW7 299 aa13.96□□□□□ -0.17
LIME1-209ENST00000494776 MGAT4BQ9UQ53 548 aa13.96□□□□□ -0.17
LIME1-209ENST00000494776 PDZD2O15018 2839 aa13.96□□□□□ -0.18
LIME1-209ENST00000494776 CSMD2Q7Z408 3487 aa13.95□□□□□ -0.18
LIME1-209ENST00000494776 A0A1W2PRQ8 180 aa13.95□□□□□ -0.18
LIME1-209ENST00000494776 ZNF99A8MXY4 864 aaPredicted RBP13.95□□□□□ -0.18
LIME1-209ENST00000494776 ABCD4O14678 606 aa13.95□□□□□ -0.18
LIME1-209ENST00000494776 HS3ST1O14792 307 aa13.95□□□□□ -0.18
LIME1-209ENST00000494776 GYG2O15488 501 aa13.95□□□□□ -0.18
LIME1-209ENST00000494776 IGHG1P01857 330 aa13.95□□□□□ -0.18
LIME1-209ENST00000494776 MAKP20794 623 aa13.95□□□□□ -0.18
LIME1-209ENST00000494776 PAX7P23759 505 aa13.95□□□□□ -0.18
LIME1-209ENST00000494776 PTAFRP25105 342 aa13.95□□□□□ -0.18
LIME1-209ENST00000494776 GPR4P46093 362 aa13.95□□□□□ -0.18
LIME1-209ENST00000494776 CAPZA2P47755 286 aa13.95□□□□□ -0.18
LIME1-209ENST00000494776 DGCR6Q14129 220 aa13.95□□□□□ -0.18
LIME1-209ENST00000494776 TRIM25Q14258 630 aaKnown RBP13.95□□□□□ -0.18
LIME1-209ENST00000494776 MTX3Q5HYI7 312 aa13.95□□□□□ -0.18
LIME1-209ENST00000494776 SLC22A25Q6T423 547 aa13.95□□□□□ -0.18
LIME1-209ENST00000494776 KBTBD8Q8NFY9 601 aa13.95□□□□□ -0.18
LIME1-209ENST00000494776 OR51A7Q8NH64 312 aa13.95□□□□□ -0.18
LIME1-209ENST00000494776 SLC7A13Q8TCU3 470 aa13.95□□□□□ -0.18
LIME1-209ENST00000494776 PIGTQ969N2 578 aa13.95□□□□□ -0.18
LIME1-209ENST00000494776 CCDC124Q96CT7 223 aaKnown RBP13.95□□□□□ -0.18
LIME1-209ENST00000494776 ZNF837Q96EG3 531 aaPredicted RBP13.95□□□□□ -0.18
LIME1-209ENST00000494776 LRGUKQ96M69 825 aa13.95□□□□□ -0.18
LIME1-209ENST00000494776 SEPHS2Q99611 448 aa13.95□□□□□ -0.18
LIME1-209ENST00000494776 CCL19Q99731 98 aa13.95□□□□□ -0.18
LIME1-209ENST00000494776 GLTPQ9NZD2 209 aa13.95□□□□□ -0.18
LIME1-209ENST00000494776 POU2F3Q9UKI9 436 aa13.95□□□□□ -0.18
LIME1-209ENST00000494776 TMEM5Q9Y2B1 443 aa13.95□□□□□ -0.18
LIME1-209ENST00000494776 TRAV27A0A087WT01 109 aa13.94□□□□□ -0.18
LIME1-209ENST00000494776 SEC14L2O76054 403 aa13.94□□□□□ -0.18
LIME1-209ENST00000494776 GADD45GO95257 159 aa13.94□□□□□ -0.18
LIME1-209ENST00000494776 SEMG1P04279 462 aa13.94□□□□□ -0.18
LIME1-209ENST00000494776 HOXB1P14653 301 aaPredicted RBP13.94□□□□□ -0.18
LIME1-209ENST00000494776 CD53P19397 219 aa13.94□□□□□ -0.18
LIME1-209ENST00000494776 ATP6V1B2P21281 511 aa13.94□□□□□ -0.18
LIME1-209ENST00000494776 CD40P25942 277 aa13.94□□□□□ -0.18
LIME1-209ENST00000494776 SLC9A3P48764 834 aa13.94□□□□□ -0.18
LIME1-209ENST00000494776 TUBA1BP68363 451 aa13.94□□□□□ -0.18
LIME1-209ENST00000494776 TUBA4AP68366 448 aa13.94□□□□□ -0.18
LIME1-209ENST00000494776 TOP3AQ13472 1001 aaPredicted RBP13.94□□□□□ -0.18
LIME1-209ENST00000494776 TAF11Q15544 211 aa13.94□□□□□ -0.18
LIME1-209ENST00000494776 DEFB113Q30KQ7 82 aa13.94□□□□□ -0.18
LIME1-209ENST00000494776 ANKDD1AQ495B1 522 aa13.94□□□□□ -0.18
LIME1-209ENST00000494776 DNAL1Q4LDG9 190 aa13.94□□□□□ -0.18
LIME1-209ENST00000494776 TUBA1AQ71U36 451 aa13.94□□□□□ -0.18
LIME1-209ENST00000494776 ZDHHC21Q8IVQ6 265 aa13.94□□□□□ -0.18
LIME1-209ENST00000494776 WDFY1Q8IWB7 410 aa13.94□□□□□ -0.18
LIME1-209ENST00000494776 MAGEE2Q8TD90 523 aaPredicted RBP13.94□□□□□ -0.18
LIME1-209ENST00000494776 TMEM54Q969K7 222 aa13.94□□□□□ -0.18
LIME1-209ENST00000494776 FBXW5Q969U6 566 aa13.94□□□□□ -0.18
LIME1-209ENST00000494776 BOD1Q96IK1 185 aa13.94□□□□□ -0.18
LIME1-209ENST00000494776 RADILQ96JH8 1075 aa13.94□□□□□ -0.18
LIME1-209ENST00000494776 ZNF347Q96SE7 839 aa13.94□□□□□ -0.18
LIME1-209ENST00000494776 NDEL1Q9GZM8 345 aa13.94□□□□□ -0.18
LIME1-209ENST00000494776 IL1RAPQ9NPH3 570 aa13.94□□□□□ -0.18
LIME1-209ENST00000494776 STX18Q9P2W9 335 aaKnown RBP13.94□□□□□ -0.18
LIME1-209ENST00000494776 AURKCQ9UQB9 309 aa13.94□□□□□ -0.18
LIME1-209ENST00000494776 HIF3AQ9Y2N7 669 aa13.94□□□□□ -0.18
LIME1-209ENST00000494776 POLQO75417 2590 aa13.93□□□□□ -0.18
LIME1-209ENST00000494776 ABCA4P78363 2273 aa13.93□□□□□ -0.18
LIME1-209ENST00000494776 ARPC4-TTLL3A0A0A6YYG9 625 aa13.93□□□□□ -0.18
LIME1-209ENST00000494776 TRBV4-1A0A0J9YWV2 114 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms