RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 CTXN1P60606 82 aa10.98□□□□□ -0.65
TRA2A-209ENST00000494255 GABPB1Q06547 395 aaPredicted RBP10.98□□□□□ -0.65
TRA2A-209ENST00000494255 TOP3AQ13472 1001 aaPredicted RBP10.98□□□□□ -0.65
TRA2A-209ENST00000494255 ACKR1Q16570 336 aa10.98□□□□□ -0.65
TRA2A-209ENST00000494255 YTHDF3Q7Z739 585 aaKnown RBP10.98□□□□□ -0.65
TRA2A-209ENST00000494255 ZER1Q7Z7L7 766 aa10.98□□□□□ -0.65
TRA2A-209ENST00000494255 P2RY8Q86VZ1 359 aa10.98□□□□□ -0.65
TRA2A-209ENST00000494255 C20orf196Q8IYI0 205 aa10.98□□□□□ -0.65
TRA2A-209ENST00000494255 C1orf162Q8NEQ5 155 aaPredicted RBP10.98□□□□□ -0.65
TRA2A-209ENST00000494255 OR4C15Q8NGM1 316 aa10.98□□□□□ -0.65
TRA2A-209ENST00000494255 HSD17B8Q92506 261 aa10.98□□□□□ -0.65
TRA2A-209ENST00000494255 ZNF566Q969W8 418 aa10.98□□□□□ -0.65
TRA2A-209ENST00000494255 UTP4Q969X6 686 aaKnown RBP10.98□□□□□ -0.65
TRA2A-209ENST00000494255 MUCL1Q96DR8 90 aa10.98□□□□□ -0.65
TRA2A-209ENST00000494255 SLC25A44Q96H78 314 aaPredicted RBP10.98□□□□□ -0.65
TRA2A-209ENST00000494255 RAB3IPQ96QF0 476 aaPredicted RBP10.98□□□□□ -0.65
TRA2A-209ENST00000494255 TXNIPQ9H3M7 391 aa10.98□□□□□ -0.65
TRA2A-209ENST00000494255 U3KQV3 271 aa10.98□□□□□ -0.65
TRA2A-209ENST00000494255 PKDREJQ9NTG1 2253 aa10.98□□□□□ -0.65
TRA2A-209ENST00000494255 NPIPB13A6NJU9 1138 aa10.98□□□□□ -0.65
TRA2A-209ENST00000494255 NPIPB4C9JG80 1138 aa10.98□□□□□ -0.65
TRA2A-209ENST00000494255 PDLIM1O00151 329 aa10.98□□□□□ -0.65
TRA2A-209ENST00000494255 E2F6O75461 281 aa10.98□□□□□ -0.65
TRA2A-209ENST00000494255 NDUFB2O95178 105 aa10.98□□□□□ -0.65
TRA2A-209ENST00000494255 FPR3P25089 353 aa10.98□□□□□ -0.65
TRA2A-209ENST00000494255 HOXC12P31275 282 aa10.98□□□□□ -0.65
TRA2A-209ENST00000494255 FOXG1P55316 489 aaPredicted RBP10.98□□□□□ -0.65
TRA2A-209ENST00000494255 SH3BGRP55822 239 aaPredicted RBP10.98□□□□□ -0.65
TRA2A-209ENST00000494255 CLRN1P58418 232 aa10.98□□□□□ -0.65
TRA2A-209ENST00000494255 RPL27P61353 136 aaKnown RBP10.98□□□□□ -0.65
TRA2A-209ENST00000494255 PPP1R8Q12972 351 aaKnown RBP10.98□□□□□ -0.65
TRA2A-209ENST00000494255 CCNIQ14094 377 aa10.98□□□□□ -0.65
TRA2A-209ENST00000494255 DAZAP2Q15038 168 aaPredicted RBP10.98□□□□□ -0.65
TRA2A-209ENST00000494255 STK11Q15831 433 aa10.98□□□□□ -0.65
TRA2A-209ENST00000494255 MICAQ29983 383 aa10.98□□□□□ -0.65
TRA2A-209ENST00000494255 FBXW10Q5XX13 1052 aa10.98□□□□□ -0.65
TRA2A-209ENST00000494255 FAM205BPQ63HN1 556 aa10.98□□□□□ -0.65
TRA2A-209ENST00000494255 C1orf94Q6P1W5 598 aa10.98□□□□□ -0.65
TRA2A-209ENST00000494255 PGBD2Q6P3X8 592 aa10.98□□□□□ -0.65
TRA2A-209ENST00000494255 SSX8Q7RTT4 187 aa10.98□□□□□ -0.65
TRA2A-209ENST00000494255 IGFN1Q86VF2 1251 aa10.98□□□□□ -0.65
TRA2A-209ENST00000494255 ZNF295-AS1Q8N0V1 137 aa10.98□□□□□ -0.65
TRA2A-209ENST00000494255 ASB10Q8WXI3 467 aa10.98□□□□□ -0.65
TRA2A-209ENST00000494255 C14orf79Q96F83 325 aa10.98□□□□□ -0.65
TRA2A-209ENST00000494255 POLDIP3Q9BY77 421 aaKnown RBP10.98□□□□□ -0.65
TRA2A-209ENST00000494255 ULBP2Q9BZM5 246 aa10.98□□□□□ -0.65
TRA2A-209ENST00000494255 CRLF2Q9HC73 371 aa10.98□□□□□ -0.65
TRA2A-209ENST00000494255 GPR35Q9HC97 309 aa10.98□□□□□ -0.65
TRA2A-209ENST00000494255 VNN3Q9NY84 501 aa10.98□□□□□ -0.65
TRA2A-209ENST00000494255 DNAJB9Q9UBS3 223 aa10.98□□□□□ -0.65
TRA2A-209ENST00000494255 SIGLEC7Q9Y286 467 aa10.98□□□□□ -0.65
TRA2A-209ENST00000494255 UTP20O75691 2785 aaKnown RBP10.97□□□□□ -0.65
TRA2A-209ENST00000494255 A6NIZ1 184 aa10.97□□□□□ -0.65
TRA2A-209ENST00000494255 OR5H1A6NKK0 313 aa10.97□□□□□ -0.65
TRA2A-209ENST00000494255 A6NNC1 897 aa10.97□□□□□ -0.65
TRA2A-209ENST00000494255 RPL36A-HNRNPH2H7BZ11 118 aa10.97□□□□□ -0.65
TRA2A-209ENST00000494255 KLF4O43474 513 aa10.97□□□□□ -0.65
TRA2A-209ENST00000494255 DEAF1O75398 565 aaPredicted RBP10.97□□□□□ -0.65
TRA2A-209ENST00000494255 GOSR1O95249 250 aa10.97□□□□□ -0.65
TRA2A-209ENST00000494255 IGHMP01871 453 aa10.97□□□□□ -0.65
TRA2A-209ENST00000494255 CD14P08571 375 aa10.97□□□□□ -0.65
TRA2A-209ENST00000494255 NR2C1P13056 603 aa10.97□□□□□ -0.65
TRA2A-209ENST00000494255 ACADSP16219 412 aa10.97□□□□□ -0.65
TRA2A-209ENST00000494255 GSSP48637 474 aa10.97□□□□□ -0.65
TRA2A-209ENST00000494255 RAP1BP61224 184 aa10.97□□□□□ -0.65
TRA2A-209ENST00000494255 RAP1AP62834 184 aa10.97□□□□□ -0.65
TRA2A-209ENST00000494255 TLE4Q04727 773 aa10.97□□□□□ -0.65
TRA2A-209ENST00000494255 TSPAN31Q12999 210 aa10.97□□□□□ -0.65
TRA2A-209ENST00000494255 FHL1Q13642 323 aa10.97□□□□□ -0.65
TRA2A-209ENST00000494255 GABRA6Q16445 453 aa10.97□□□□□ -0.65
TRA2A-209ENST00000494255 CEACAM16Q2WEN9 425 aa10.97□□□□□ -0.65
TRA2A-209ENST00000494255 TIMM23BQ5SRD1 257 aa10.97□□□□□ -0.65
TRA2A-209ENST00000494255 ALKBH2Q6NS38 261 aa10.97□□□□□ -0.65
TRA2A-209ENST00000494255 SMARCD3Q6STE5 483 aa10.97□□□□□ -0.65
TRA2A-209ENST00000494255 KLHL24Q6TFL4 600 aa10.97□□□□□ -0.65
TRA2A-209ENST00000494255 LINGO2Q7L985 606 aa10.97□□□□□ -0.65
TRA2A-209ENST00000494255 WFDC8Q8IUA0 241 aa10.97□□□□□ -0.65
TRA2A-209ENST00000494255 C17orf78Q8N4C9 275 aa10.97□□□□□ -0.65
TRA2A-209ENST00000494255 LRRC75AQ8NAA5 344 aa10.97□□□□□ -0.65
TRA2A-209ENST00000494255 OR9Q2Q8NGE9 314 aa10.97□□□□□ -0.65
TRA2A-209ENST00000494255 FANK1Q8TC84 345 aa10.97□□□□□ -0.65
TRA2A-209ENST00000494255 GIPC3Q8TF64 312 aa10.97□□□□□ -0.65
TRA2A-209ENST00000494255 SLCO4A1Q96BD0 722 aa10.97□□□□□ -0.65
TRA2A-209ENST00000494255 KATNB1Q9BVA0 655 aa10.97□□□□□ -0.65
TRA2A-209ENST00000494255 NGBQ9NPG2 151 aa10.97□□□□□ -0.65
TRA2A-209ENST00000494255 GRHPRQ9UBQ7 328 aa10.97□□□□□ -0.65
TRA2A-209ENST00000494255 AP4S1Q9Y587 144 aa10.97□□□□□ -0.65
TRA2A-209ENST00000494255 CENPBD1B2RD01 187 aa10.96□□□□□ -0.65
TRA2A-209ENST00000494255 PTP4A3O75365 173 aa10.96□□□□□ -0.65
TRA2A-209ENST00000494255 TIPRLO75663 272 aa10.96□□□□□ -0.65
TRA2A-209ENST00000494255 PGA4P0DJD7 388 aa10.96□□□□□ -0.65
TRA2A-209ENST00000494255 PGA3P0DJD8 388 aa10.96□□□□□ -0.65
TRA2A-209ENST00000494255 CRYGSP22914 178 aa10.96□□□□□ -0.65
TRA2A-209ENST00000494255 ARHGDIAP52565 204 aa10.96□□□□□ -0.65
TRA2A-209ENST00000494255 ERVK-25P63136 954 aa10.96□□□□□ -0.65
TRA2A-209ENST00000494255 PPA1Q15181 289 aa10.96□□□□□ -0.65
TRA2A-209ENST00000494255 TAB1Q15750 504 aa10.96□□□□□ -0.65
TRA2A-209ENST00000494255 ARMC4Q5T2S8 1044 aa10.96□□□□□ -0.65
TRA2A-209ENST00000494255 C10orf67Q8IYJ2 551 aa10.96□□□□□ -0.65
TRA2A-209ENST00000494255 AQP11Q8NBQ7 271 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms