RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 IGLV3-27P01718 113 aa17.67■□□□□ 0.42
COL27A1-207ENST00000494090 FCGR2AP12318 317 aa17.67■□□□□ 0.42
COL27A1-207ENST00000494090 LCN6P62502 163 aa17.67■□□□□ 0.42
COL27A1-207ENST00000494090 METRNLQ641Q3 311 aa17.67■□□□□ 0.42
COL27A1-207ENST00000494090 IDO2Q6ZQW0 420 aa17.67■□□□□ 0.42
COL27A1-207ENST00000494090 GPR155Q7Z3F1 870 aa17.67■□□□□ 0.42
COL27A1-207ENST00000494090 TRAPPC2LQ9UL33 140 aa17.67■□□□□ 0.42
COL27A1-207ENST00000494090 NRAPQ86VF7 1730 aa17.67■□□□□ 0.42
COL27A1-207ENST00000494090 TMEM221A6NGB7 291 aa17.67■□□□□ 0.42
COL27A1-207ENST00000494090 KCNK2O95069 426 aa17.67■□□□□ 0.42
COL27A1-207ENST00000494090 SNAPINO95295 136 aa17.67■□□□□ 0.42
COL27A1-207ENST00000494090 MAKP20794 623 aa17.67■□□□□ 0.42
COL27A1-207ENST00000494090 ZNF750Q32MQ0 723 aa17.67■□□□□ 0.42
COL27A1-207ENST00000494090 PRAMEF20Q5VT98 475 aa17.67■□□□□ 0.42
COL27A1-207ENST00000494090 SLC35D2Q76EJ3 337 aa17.67■□□□□ 0.42
COL27A1-207ENST00000494090 TMEM129A0AVI4 362 aa17.67■□□□□ 0.42
COL27A1-207ENST00000494090 HSBP1L1C9JCN9 74 aa17.67■□□□□ 0.42
COL27A1-207ENST00000494090 ALOX12BO75342 701 aa17.67■□□□□ 0.42
COL27A1-207ENST00000494090 SERPINA7P05543 415 aa17.67■□□□□ 0.42
COL27A1-207ENST00000494090 LRRC18Q8N456 261 aa17.67■□□□□ 0.42
COL27A1-207ENST00000494090 ACKR4Q9NPB9 350 aa17.67■□□□□ 0.42
COL27A1-207ENST00000494090 LUZP4Q9P127 313 aa17.67■□□□□ 0.42
COL27A1-207ENST00000494090 PCDHGA1Q9Y5H4 931 aa17.67■□□□□ 0.42
COL27A1-207ENST00000494090 ITGB8P26012 769 aa17.66■□□□□ 0.42
COL27A1-207ENST00000494090 ALKBH1Q13686 389 aaKnown RBP17.66■□□□□ 0.42
COL27A1-207ENST00000494090 OPCMLQ14982 345 aa17.66■□□□□ 0.42
COL27A1-207ENST00000494090 PLCXD1Q9NUJ7 323 aa17.66■□□□□ 0.42
COL27A1-207ENST00000494090 DDX60LQ5H9U9 1706 aaKnown RBP17.66■□□□□ 0.42
COL27A1-207ENST00000494090 TARM1B6A8C7 271 aa17.66■□□□□ 0.42
COL27A1-207ENST00000494090 FABP7O15540 132 aa17.66■□□□□ 0.42
COL27A1-207ENST00000494090 LGI1O95970 557 aa17.66■□□□□ 0.42
COL27A1-207ENST00000494090 TEAD1P28347 426 aa17.66■□□□□ 0.42
COL27A1-207ENST00000494090 TEKQ02763 1124 aa17.66■□□□□ 0.42
COL27A1-207ENST00000494090 GALEQ14376 348 aa17.66■□□□□ 0.42
COL27A1-207ENST00000494090 PDLIM3Q53GG5 364 aaPredicted RBP17.66■□□□□ 0.42
COL27A1-207ENST00000494090 CST9Q5W186 159 aa17.66■□□□□ 0.42
COL27A1-207ENST00000494090 WDR5BQ86VZ2 330 aa17.66■□□□□ 0.42
COL27A1-207ENST00000494090 NUDT8Q8WV74 236 aa17.66■□□□□ 0.42
COL27A1-207ENST00000494090 PDXPQ96GD0 296 aa17.66■□□□□ 0.42
COL27A1-207ENST00000494090 GABARAPL3Q9BY60 117 aa17.66■□□□□ 0.42
COL27A1-207ENST00000494090 PRAMEF27A3QJZ7 478 aa17.66■□□□□ 0.42
COL27A1-207ENST00000494090 LRIT2A6NDA9 550 aa17.66■□□□□ 0.42
COL27A1-207ENST00000494090 TMEM202A6NGA9 273 aa17.66■□□□□ 0.42
COL27A1-207ENST00000494090 CPT2P23786 658 aa17.66■□□□□ 0.42
COL27A1-207ENST00000494090 RPS19P39019 145 aaKnown RBP17.66■□□□□ 0.42
COL27A1-207ENST00000494090 MFGE8Q08431 387 aaPredicted RBP17.66■□□□□ 0.42
COL27A1-207ENST00000494090 CTU2Q2VPK5 515 aaKnown RBP17.66■□□□□ 0.42
COL27A1-207ENST00000494090 PRAMEF9Q5VWM5 478 aa17.66■□□□□ 0.42
COL27A1-207ENST00000494090 SIAH3Q8IW03 269 aa17.66■□□□□ 0.42
COL27A1-207ENST00000494090 ZADH2Q8N4Q0 377 aa17.66■□□□□ 0.42
COL27A1-207ENST00000494090 MUTYHQ9UIF7 546 aa17.66■□□□□ 0.42
COL27A1-207ENST00000494090 COL22A1Q8NFW1 1626 aaPredicted RBP17.66■□□□□ 0.42
COL27A1-207ENST00000494090 ITGB4P16144 1822 aa17.66■□□□□ 0.42
COL27A1-207ENST00000494090 TCRBV5S2A0A599 114 aa17.66■□□□□ 0.42
COL27A1-207ENST00000494090 ABHD16AO95870 558 aa17.66■□□□□ 0.42
COL27A1-207ENST00000494090 WDR88Q6ZMY6 472 aa17.66■□□□□ 0.42
COL27A1-207ENST00000494090 SLC16A11Q8NCK7 471 aa17.66■□□□□ 0.42
COL27A1-207ENST00000494090 RAB3CQ96E17 227 aa17.66■□□□□ 0.42
COL27A1-207ENST00000494090 ZIC5Q96T25 663 aa17.66■□□□□ 0.42
COL27A1-207ENST00000494090 EMC7Q9NPA0 242 aa17.66■□□□□ 0.42
COL27A1-207ENST00000494090 PRAMEF25A6NGN4 478 aa17.65■□□□□ 0.42
COL27A1-207ENST00000494090 CD14P08571 375 aa17.65■□□□□ 0.42
COL27A1-207ENST00000494090 PTGER4P35408 488 aa17.65■□□□□ 0.42
COL27A1-207ENST00000494090 RPL35P42766 123 aaKnown RBP17.65■□□□□ 0.42
COL27A1-207ENST00000494090 IKZF1Q13422 519 aa17.65■□□□□ 0.42
COL27A1-207ENST00000494090 CHST8Q9H2A9 424 aa17.65■□□□□ 0.42
COL27A1-207ENST00000494090 WASH6PQ9NQA3 447 aa17.65■□□□□ 0.42
COL27A1-207ENST00000494090 TM7SF3Q9NS93 570 aa17.65■□□□□ 0.42
COL27A1-207ENST00000494090 SLC25A37Q9NYZ2 338 aa17.65■□□□□ 0.42
COL27A1-207ENST00000494090 NPFFR2Q9Y5X5 522 aa17.65■□□□□ 0.42
COL27A1-207ENST00000494090 PAPLNO95428 1278 aa17.65■□□□□ 0.42
COL27A1-207ENST00000494090 FUCA1P04066 466 aa17.65■□□□□ 0.42
COL27A1-207ENST00000494090 HOXB5P09067 269 aa17.65■□□□□ 0.42
COL27A1-207ENST00000494090 BMP1P13497 986 aa17.65■□□□□ 0.42
COL27A1-207ENST00000494090 IL3RAP26951 378 aa17.65■□□□□ 0.42
COL27A1-207ENST00000494090 VEGFCP49767 419 aa17.65■□□□□ 0.42
COL27A1-207ENST00000494090 SDSLQ96GA7 329 aa17.65■□□□□ 0.42
COL27A1-207ENST00000494090 A0A1W2PPH5 198 aa17.65■□□□□ 0.42
COL27A1-207ENST00000494090 PIP5K1CO60331 668 aa17.65■□□□□ 0.42
COL27A1-207ENST00000494090 ZDHHC11BP0C7U3 371 aa17.65■□□□□ 0.42
COL27A1-207ENST00000494090 BIDP55957 195 aa17.65■□□□□ 0.42
COL27A1-207ENST00000494090 DYRK1AQ13627 763 aa17.65■□□□□ 0.42
COL27A1-207ENST00000494090 ZMAT1Q5H9K5 638 aa17.65■□□□□ 0.42
COL27A1-207ENST00000494090 OR13C9Q8NGT0 318 aa17.65■□□□□ 0.42
COL27A1-207ENST00000494090 SLCO5A1Q9H2Y9 848 aa17.65■□□□□ 0.42
COL27A1-207ENST00000494090 GNG12Q9UBI6 72 aa17.65■□□□□ 0.42
COL27A1-207ENST00000494090 COPS3Q9UNS2 423 aa17.65■□□□□ 0.42
COL27A1-207ENST00000494090 SULT1B1O43704 296 aa17.65■□□□□ 0.42
COL27A1-207ENST00000494090 CD53P19397 219 aa17.65■□□□□ 0.42
COL27A1-207ENST00000494090 CYB561P49447 251 aa17.65■□□□□ 0.42
COL27A1-207ENST00000494090 GP2P55259 537 aaKnown RBP17.65■□□□□ 0.42
COL27A1-207ENST00000494090 SYT14P1Q58G82 188 aa17.65■□□□□ 0.42
COL27A1-207ENST00000494090 C9orf135Q5VTT2 229 aa17.65■□□□□ 0.42
COL27A1-207ENST00000494090 SLC22A24Q8N4F4 322 aa17.65■□□□□ 0.42
COL27A1-207ENST00000494090 NKAIN3Q8N8D7 197 aa17.65■□□□□ 0.42
COL27A1-207ENST00000494090 SNCAP37840 140 aa17.64■□□□□ 0.42
COL27A1-207ENST00000494090 OR13H1Q8NG92 308 aa17.64■□□□□ 0.42
COL27A1-207ENST00000494090 SLC25A46Q96AG3 418 aa17.64■□□□□ 0.42
COL27A1-207ENST00000494090 IP6K3Q96PC2 410 aa17.64■□□□□ 0.42
COL27A1-207ENST00000494090 MCOLN1Q9GZU1 580 aa17.64■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms