RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 CDCA2Q69YH5 1023 aaPredicted RBP7.3□□□□□ -1.24
BRCA1-221ENST00000493795 ADGRE4PQ86SQ3 457 aa7.3□□□□□ -1.24
BRCA1-221ENST00000493795 NKAIN3Q8N8D7 197 aa7.3□□□□□ -1.24
BRCA1-221ENST00000493795 OR10J5Q8NHC4 309 aa7.3□□□□□ -1.24
BRCA1-221ENST00000493795 GNPNAT1Q96EK6 184 aaPredicted RBP7.3□□□□□ -1.24
BRCA1-221ENST00000493795 IGSF21Q96ID5 467 aa7.3□□□□□ -1.24
BRCA1-221ENST00000493795 PIGQQ9BRB3 760 aa7.3□□□□□ -1.24
BRCA1-221ENST00000493795 IKZF5Q9H5V7 419 aa7.3□□□□□ -1.24
BRCA1-221ENST00000493795 RBFOX1Q9NWB1 397 aaKnown RBP7.3□□□□□ -1.24
BRCA1-221ENST00000493795 DIP2AQ14689 1571 aa7.3□□□□□ -1.24
BRCA1-221ENST00000493795 MEGF6O75095 1541 aa7.3□□□□□ -1.24
BRCA1-221ENST00000493795 SPHKAPQ2M3C7 1700 aa7.3□□□□□ -1.24
BRCA1-221ENST00000493795 TMEM72A0PK05 275 aa7.3□□□□□ -1.24
BRCA1-221ENST00000493795 SLC9B1P1A6NJY1 282 aa7.3□□□□□ -1.24
BRCA1-221ENST00000493795 SIX6O95475 246 aa7.3□□□□□ -1.24
BRCA1-221ENST00000493795 HMGN2P05204 90 aaKnown RBP7.3□□□□□ -1.24
BRCA1-221ENST00000493795 ATXN1LP0C7T5 689 aaKnown RBP7.3□□□□□ -1.24
BRCA1-221ENST00000493795 MLF1P58340 268 aa7.3□□□□□ -1.24
BRCA1-221ENST00000493795 PHLDA2Q53GA4 152 aa7.3□□□□□ -1.24
BRCA1-221ENST00000493795 FA2HQ7L5A8 372 aa7.3□□□□□ -1.24
BRCA1-221ENST00000493795 TSEN54Q7Z6J9 526 aaKnown RBP7.3□□□□□ -1.24
BRCA1-221ENST00000493795 NAXDQ8IW45 347 aa7.3□□□□□ -1.24
BRCA1-221ENST00000493795 RNF113BQ8IZP6 322 aaKnown RBP7.3□□□□□ -1.24
BRCA1-221ENST00000493795 OR6K3Q8NGY3 331 aa7.3□□□□□ -1.24
BRCA1-221ENST00000493795 PCNPQ8WW12 178 aaKnown RBP7.3□□□□□ -1.24
BRCA1-221ENST00000493795 IGSF8Q969P0 613 aa7.3□□□□□ -1.24
BRCA1-221ENST00000493795 ADOQ96SZ5 270 aa7.3□□□□□ -1.24
BRCA1-221ENST00000493795 GORASP2Q9H8Y8 452 aa7.3□□□□□ -1.24
BRCA1-221ENST00000493795 WDR76Q9H967 626 aa7.3□□□□□ -1.24
BRCA1-221ENST00000493795 NXT1Q9UKK6 140 aaKnown RBP7.3□□□□□ -1.24
BRCA1-221ENST00000493795 PIGLQ9Y2B2 252 aa7.3□□□□□ -1.24
BRCA1-221ENST00000493795 ABCA6Q8N139 1617 aa7.3□□□□□ -1.24
BRCA1-221ENST00000493795 TCRBP04435 133 aa7.3□□□□□ -1.24
BRCA1-221ENST00000493795 MMP7P09237 267 aaPredicted RBP7.3□□□□□ -1.24
BRCA1-221ENST00000493795 CCL5P13501 91 aa7.3□□□□□ -1.24
BRCA1-221ENST00000493795 NKX2-1P43699 371 aaPredicted RBP7.3□□□□□ -1.24
BRCA1-221ENST00000493795 TBC1D28Q2M2D7 210 aa7.3□□□□□ -1.24
BRCA1-221ENST00000493795 CLEC9AQ6UXN8 241 aa7.3□□□□□ -1.24
BRCA1-221ENST00000493795 PRSS35Q8N3Z0 413 aa7.3□□□□□ -1.24
BRCA1-221ENST00000493795 EMG1Q92979 244 aaKnown RBP7.3□□□□□ -1.24
BRCA1-221ENST00000493795 NKX2-4Q9H2Z4 354 aa7.3□□□□□ -1.24
BRCA1-221ENST00000493795 UCK1Q9HA47 277 aa7.3□□□□□ -1.24
BRCA1-221ENST00000493795 IGSF5Q9NSI5 407 aa7.3□□□□□ -1.24
BRCA1-221ENST00000493795 TIMM9Q9Y5J7 89 aa7.3□□□□□ -1.24
BRCA1-221ENST00000493795 LOC100289279A0A1B0GTE1 492 aa7.29□□□□□ -1.24
BRCA1-221ENST00000493795 ACOD1A6NK06 481 aa7.29□□□□□ -1.24
BRCA1-221ENST00000493795 DEGS1O15121 323 aa7.29□□□□□ -1.24
BRCA1-221ENST00000493795 NME2P1O60361 137 aa7.29□□□□□ -1.24
BRCA1-221ENST00000493795 SNNO75324 88 aaPredicted RBP7.29□□□□□ -1.24
BRCA1-221ENST00000493795 ADRB1P08588 477 aa7.29□□□□□ -1.24
BRCA1-221ENST00000493795 OR8G3PP0DMU2 310 aa7.29□□□□□ -1.24
BRCA1-221ENST00000493795 SELEP16581 610 aa7.29□□□□□ -1.24
BRCA1-221ENST00000493795 APEX1P27695 318 aaKnown RBP7.29□□□□□ -1.24
BRCA1-221ENST00000493795 AKR1C3P42330 323 aa7.29□□□□□ -1.24
BRCA1-221ENST00000493795 HTR6P50406 440 aa7.29□□□□□ -1.24
BRCA1-221ENST00000493795 COL13A1Q5TAT6 717 aaPredicted RBP7.29□□□□□ -1.24
BRCA1-221ENST00000493795 SFXN4Q6P4A7 337 aa7.29□□□□□ -1.24
BRCA1-221ENST00000493795 PET117Q6UWS5 81 aa7.29□□□□□ -1.24
BRCA1-221ENST00000493795 CYS1Q717R9 158 aa7.29□□□□□ -1.24
BRCA1-221ENST00000493795 CTU1Q7Z7A3 348 aaKnown RBP7.29□□□□□ -1.24
BRCA1-221ENST00000493795 VRK2Q86Y07 508 aa7.29□□□□□ -1.24
BRCA1-221ENST00000493795 MISPQ8IVT2 679 aa7.29□□□□□ -1.24
BRCA1-221ENST00000493795 L3MBTL4Q8NA19 623 aa7.29□□□□□ -1.24
BRCA1-221ENST00000493795 CPEB3Q8NE35 698 aaKnown RBP7.29□□□□□ -1.24
BRCA1-221ENST00000493795 OR51A2Q8NGJ7 313 aa7.29□□□□□ -1.24
BRCA1-221ENST00000493795 OR5AR1Q8NGP9 310 aa7.29□□□□□ -1.24
BRCA1-221ENST00000493795 KHSRPQ92945 711 aaKnown RBP eCLIP7.29□□□□□ -1.244e-9■■■□□ 15.2
BRCA1-221ENST00000493795 MENTQ9BUN1 341 aa7.29□□□□□ -1.24
BRCA1-221ENST00000493795 VAMP8Q9BV40 100 aa7.29□□□□□ -1.24
BRCA1-221ENST00000493795 ACOXLQ9NUZ1 547 aa7.29□□□□□ -1.24
BRCA1-221ENST00000493795 KIAA1324LA8MWY0 1029 aaPredicted RBP7.29□□□□□ -1.24
BRCA1-221ENST00000493795 M0QYG6 137 aa7.29□□□□□ -1.24
BRCA1-221ENST00000493795 HCRTO43612 131 aa7.29□□□□□ -1.24
BRCA1-221ENST00000493795 LDB3O75112 727 aa7.29□□□□□ -1.24
BRCA1-221ENST00000493795 PAPLNO95428 1278 aa7.29□□□□□ -1.24
BRCA1-221ENST00000493795 ABHD16AO95870 558 aa7.29□□□□□ -1.24
BRCA1-221ENST00000493795 CSF3P09919 207 aa7.29□□□□□ -1.24
BRCA1-221ENST00000493795 OR2T7P0C7T2 308 aa7.29□□□□□ -1.24
BRCA1-221ENST00000493795 ICAM2P13598 275 aa7.29□□□□□ -1.24
BRCA1-221ENST00000493795 EDDM3AQ14507 147 aa7.29□□□□□ -1.24
BRCA1-221ENST00000493795 RTL8BQ17RB0 113 aa7.29□□□□□ -1.24
BRCA1-221ENST00000493795 MAMDC4Q6UXC1 1216 aa7.29□□□□□ -1.24
BRCA1-221ENST00000493795 NRARPQ7Z6K4 114 aa7.29□□□□□ -1.24
BRCA1-221ENST00000493795 ACOT4Q8N9L9 421 aa7.29□□□□□ -1.24
BRCA1-221ENST00000493795 NECTIN4Q96NY8 510 aa7.29□□□□□ -1.24
BRCA1-221ENST00000493795 EGLN1Q9GZT9 426 aa7.29□□□□□ -1.24
BRCA1-221ENST00000493795 SPACA1Q9HBV2 294 aa7.29□□□□□ -1.24
BRCA1-221ENST00000493795 AGPAT4Q9NRZ5 378 aa7.29□□□□□ -1.24
BRCA1-221ENST00000493795 LYRM2Q9NU23 88 aaPredicted RBP7.29□□□□□ -1.24
BRCA1-221ENST00000493795 ZNF629Q9UEG4 869 aaPredicted RBP7.29□□□□□ -1.24
BRCA1-221ENST00000493795 RNF150Q9ULK6 438 aa7.29□□□□□ -1.24
BRCA1-221ENST00000493795 NFS1Q9Y697 457 aa7.29□□□□□ -1.24
BRCA1-221ENST00000493795 ZCWPW2A0A1B0GU75 182 aa7.29□□□□□ -1.24
BRCA1-221ENST00000493795 FAM183AA6NL82 134 aa7.29□□□□□ -1.24
BRCA1-221ENST00000493795 ZNF727A8MUV8 499 aa7.29□□□□□ -1.24
BRCA1-221ENST00000493795 GPR171O14626 319 aa7.29□□□□□ -1.24
BRCA1-221ENST00000493795 GLAP06280 429 aa7.29□□□□□ -1.24
BRCA1-221ENST00000493795 FBP1P09467 338 aa7.29□□□□□ -1.24
BRCA1-221ENST00000493795 OR5G3P0C626 314 aa7.29□□□□□ -1.24
BRCA1-221ENST00000493795 SLURP2P0DP57 97 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms