RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 BCO1Q9HAY6 547 aa15.26■□□□□ 0.03
LIME1-208ENST00000493265 GLRX2Q9NS18 164 aa15.26■□□□□ 0.03
LIME1-208ENST00000493265 USE1Q9NZ43 259 aa15.26■□□□□ 0.03
LIME1-208ENST00000493265 Q9UFV3 132 aa15.26■□□□□ 0.03
LIME1-208ENST00000493265 DIDO1Q9BTC0 2240 aaKnown RBP15.26■□□□□ 0.03
LIME1-208ENST00000493265 LOC102725191A0A1B0GVB3 256 aa15.25■□□□□ 0.03
LIME1-208ENST00000493265 ZNF726A6NNF4 738 aa15.25■□□□□ 0.03
LIME1-208ENST00000493265 HSPB2A8KAH6 182 aa15.25■□□□□ 0.03
LIME1-208ENST00000493265 ZNF724A8MTY0 619 aa15.25■□□□□ 0.03
LIME1-208ENST00000493265 MRPL33O75394 65 aaKnown RBP15.25■□□□□ 0.03
LIME1-208ENST00000493265 SMNDC1O75940 238 aaKnown RBP eCLIP15.25■□□□□ 0.03
LIME1-208ENST00000493265 CD14P08571 375 aa15.25■□□□□ 0.03
LIME1-208ENST00000493265 NOS3P29474 1203 aa15.25■□□□□ 0.03
LIME1-208ENST00000493265 CAMK2DQ13557 499 aa15.25■□□□□ 0.03
LIME1-208ENST00000493265 HSPB2Q16082 182 aa15.25■□□□□ 0.03
LIME1-208ENST00000493265 SLC35F1Q5T1Q4 408 aa15.25■□□□□ 0.03
LIME1-208ENST00000493265 TMEM236Q5W0B7 351 aa15.25■□□□□ 0.03
LIME1-208ENST00000493265 RPL13AP3Q6NVV1 102 aa15.25■□□□□ 0.03
LIME1-208ENST00000493265 VWA1Q6PCB0 445 aa15.25■□□□□ 0.03
LIME1-208ENST00000493265 DPY19L2P2Q6ZN68 376 aa15.25■□□□□ 0.03
LIME1-208ENST00000493265 FAM214BQ7L5A3 538 aa15.25■□□□□ 0.03
LIME1-208ENST00000493265 WDFY1Q8IWB7 410 aa15.25■□□□□ 0.03
LIME1-208ENST00000493265 ZNF100Q8IYN0 542 aa15.25■□□□□ 0.03
LIME1-208ENST00000493265 RASD2Q96D21 266 aa15.25■□□□□ 0.03
LIME1-208ENST00000493265 CCDC120Q96HB5 630 aa15.25■□□□□ 0.03
LIME1-208ENST00000493265 ZNF570Q96NI8 536 aa15.25■□□□□ 0.03
LIME1-208ENST00000493265 TSPAN32Q96QS1 320 aa15.25■□□□□ 0.03
LIME1-208ENST00000493265 IL20Q9NYY1 176 aa15.25■□□□□ 0.03
LIME1-208ENST00000493265 GRHPRQ9UBQ7 328 aa15.25■□□□□ 0.03
LIME1-208ENST00000493265 ZNF346Q9UL40 294 aaKnown RBP15.25■□□□□ 0.03
LIME1-208ENST00000493265 TEX13CA0A0J9YWL9 993 aa15.24■□□□□ 0.03
LIME1-208ENST00000493265 SLC35F4A4IF30 521 aa15.24■□□□□ 0.03
LIME1-208ENST00000493265 IGHV3-9P01782 118 aa15.24■□□□□ 0.03
LIME1-208ENST00000493265 CDH2P19022 906 aaPredicted RBP15.24■□□□□ 0.03
LIME1-208ENST00000493265 BMP5P22003 454 aa15.24■□□□□ 0.03
LIME1-208ENST00000493265 CTSSP25774 331 aa15.24■□□□□ 0.03
LIME1-208ENST00000493265 NTF4P34130 210 aa15.24■□□□□ 0.03
LIME1-208ENST00000493265 ACVR1BP36896 505 aa15.24■□□□□ 0.03
LIME1-208ENST00000493265 POLR2IP36954 125 aaKnown RBP15.24■□□□□ 0.03
LIME1-208ENST00000493265 KIR2DL2P43627 348 aaPredicted RBP15.24■□□□□ 0.03
LIME1-208ENST00000493265 SELENOPP49908 381 aa15.24■□□□□ 0.03
LIME1-208ENST00000493265 DAP3P51398 398 aaKnown RBP15.24■□□□□ 0.03
LIME1-208ENST00000493265 RPS6KA3P51812 740 aa15.24■□□□□ 0.03
LIME1-208ENST00000493265 CRISP1P54107 249 aa15.24■□□□□ 0.03
LIME1-208ENST00000493265 RAD23AP54725 363 aa15.24■□□□□ 0.03
LIME1-208ENST00000493265 RPL27P61353 136 aaKnown RBP15.24■□□□□ 0.03
LIME1-208ENST00000493265 GINS1Q14691 196 aa15.24■□□□□ 0.03
LIME1-208ENST00000493265 CLDN22Q8N7P3 220 aa15.24■□□□□ 0.03
LIME1-208ENST00000493265 OR4Q3Q8NH05 313 aa15.24■□□□□ 0.03
LIME1-208ENST00000493265 Q96M85 177 aa15.24■□□□□ 0.03
LIME1-208ENST00000493265 ZFP3Q96NJ6 502 aa15.24■□□□□ 0.03
LIME1-208ENST00000493265 TACO1Q9BSH4 297 aaKnown RBP15.24■□□□□ 0.03
LIME1-208ENST00000493265 TXNIPQ9H3M7 391 aa15.24■□□□□ 0.03
LIME1-208ENST00000493265 GP6Q9HCN6 339 aa15.24■□□□□ 0.03
LIME1-208ENST00000493265 FANCFQ9NPI8 374 aa15.24■□□□□ 0.03
LIME1-208ENST00000493265 RNF6Q9Y252 685 aa15.24■□□□□ 0.03
LIME1-208ENST00000493265 CSMD1Q96PZ7 3565 aa15.24■□□□□ 0.03
LIME1-208ENST00000493265 H7C1C5 153 aa15.23■□□□□ 0.03
LIME1-208ENST00000493265 AKAP8O43823 692 aaKnown RBP15.23■□□□□ 0.03
LIME1-208ENST00000493265 SNAP29O95721 258 aa15.23■□□□□ 0.03
LIME1-208ENST00000493265 EDNRAP25101 427 aa15.23■□□□□ 0.03
LIME1-208ENST00000493265 EPHA2P29317 976 aa15.23■□□□□ 0.03
LIME1-208ENST00000493265 PTDSS1P48651 473 aaKnown RBP15.23■□□□□ 0.03
LIME1-208ENST00000493265 LCN6P62502 163 aa15.23■□□□□ 0.03
LIME1-208ENST00000493265 ADORA2A-AS1P86434 159 aa15.23■□□□□ 0.03
LIME1-208ENST00000493265 LGALS3BPQ08380 585 aa15.23■□□□□ 0.03
LIME1-208ENST00000493265 NHLRC1Q6VVB1 395 aa15.23■□□□□ 0.03
LIME1-208ENST00000493265 BTLAQ7Z6A9 289 aa15.23■□□□□ 0.03
LIME1-208ENST00000493265 UBE2J2Q8N2K1 259 aa15.23■□□□□ 0.03
LIME1-208ENST00000493265 PARP8Q8N3A8 854 aa15.23■□□□□ 0.03
LIME1-208ENST00000493265 SYT14Q8NB59 555 aa15.23■□□□□ 0.03
LIME1-208ENST00000493265 OR2T33Q8NG76 320 aa15.23■□□□□ 0.03
LIME1-208ENST00000493265 ASB10Q8WXI3 467 aa15.23■□□□□ 0.03
LIME1-208ENST00000493265 OR2M2Q96R28 347 aa15.23■□□□□ 0.03
LIME1-208ENST00000493265 GPX7Q96SL4 187 aaPredicted RBP15.23■□□□□ 0.03
LIME1-208ENST00000493265 VCXQ9H320 206 aa15.23■□□□□ 0.03
LIME1-208ENST00000493265 TOR3AQ9H497 397 aa15.23■□□□□ 0.03
LIME1-208ENST00000493265 NRIP3Q9NQ35 241 aa15.23■□□□□ 0.03
LIME1-208ENST00000493265 PARPBPQ9NWS1 579 aa15.23■□□□□ 0.03
LIME1-208ENST00000493265 MED12LQ86YW9 2145 aa15.23■□□□□ 0.03
LIME1-208ENST00000493265 DOCK7Q96N67 2140 aa15.23■□□□□ 0.03
LIME1-208ENST00000493265 PHF3Q92576 2039 aaKnown RBP15.22■□□□□ 0.03
LIME1-208ENST00000493265 POLEQ07864 2286 aa15.22■□□□□ 0.03
LIME1-208ENST00000493265 EEF1E1-BLOC1S5C9J1V9 151 aa15.22■□□□□ 0.03
LIME1-208ENST00000493265 BHLHE40O14503 412 aa15.22■□□□□ 0.03
LIME1-208ENST00000493265 ARHGEF9O43307 516 aa15.22■□□□□ 0.03
LIME1-208ENST00000493265 EEF1E1O43324 174 aaKnown RBP15.22■□□□□ 0.03
LIME1-208ENST00000493265 SLC43A1O75387 559 aa15.22■□□□□ 0.03
LIME1-208ENST00000493265 TNFSF13O75888 250 aa15.22■□□□□ 0.03
LIME1-208ENST00000493265 KRT33AO76009 404 aa15.22■□□□□ 0.03
LIME1-208ENST00000493265 CRHP06850 196 aa15.22■□□□□ 0.03
LIME1-208ENST00000493265 CLRN1P58418 232 aa15.22■□□□□ 0.03
LIME1-208ENST00000493265 ESRRGP62508 458 aa15.22■□□□□ 0.03
LIME1-208ENST00000493265 MYBPC1Q00872 1141 aa15.22■□□□□ 0.03
LIME1-208ENST00000493265 RUNX1T1Q06455 604 aa15.22■□□□□ 0.03
LIME1-208ENST00000493265 NPRL3Q12980 569 aa15.22■□□□□ 0.03
LIME1-208ENST00000493265 KRR1Q13601 381 aaKnown RBP15.22■□□□□ 0.03
LIME1-208ENST00000493265 PTGES3Q15185 160 aaKnown RBP15.22■□□□□ 0.03
LIME1-208ENST00000493265 GUSBP1Q15486 140 aa15.22■□□□□ 0.03
LIME1-208ENST00000493265 PGGHGQ32M88 737 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms