RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 HSD17B2P37059 387 aa1.84□□□□□ -2.11
HMGB1P30-201ENST00000492455 RPS10P46783 165 aaKnown RBP1.84□□□□□ -2.11
HMGB1P30-201ENST00000492455 NPBWR2P48146 333 aa1.84□□□□□ -2.11
HMGB1P30-201ENST00000492455 LHX2P50458 406 aa1.84□□□□□ -2.11
HMGB1P30-201ENST00000492455 CRISP3P54108 245 aa1.84□□□□□ -2.11
HMGB1P30-201ENST00000492455 FBXW4P57775 412 aa1.84□□□□□ -2.11
HMGB1P30-201ENST00000492455 ERVK-25P63136 954 aa1.84□□□□□ -2.11
HMGB1P30-201ENST00000492455 CCNA1P78396 465 aa1.84□□□□□ -2.11
HMGB1P30-201ENST00000492455 REG3AQ06141 175 aa1.84□□□□□ -2.11
HMGB1P30-201ENST00000492455 SRSF5Q13243 272 aaKnown RBP1.84□□□□□ -2.11
HMGB1P30-201ENST00000492455 NRF1Q16656 503 aa1.84□□□□□ -2.11
HMGB1P30-201ENST00000492455 HSP90AB3PQ58FF7 597 aa1.84□□□□□ -2.11
HMGB1P30-201ENST00000492455 XKR7Q5GH72 579 aa1.84□□□□□ -2.11
HMGB1P30-201ENST00000492455 TRIM40Q6P9F5 258 aa1.84□□□□□ -2.11
HMGB1P30-201ENST00000492455 METAP1DQ6UB28 335 aaPredicted RBP1.84□□□□□ -2.11
HMGB1P30-201ENST00000492455 C19orf35Q6ZS72 473 aa1.84□□□□□ -2.11
HMGB1P30-201ENST00000492455 FAM71E2Q8N5Q1 922 aa1.84□□□□□ -2.11
HMGB1P30-201ENST00000492455 ZNF557Q8N988 423 aaPredicted RBP1.84□□□□□ -2.11
HMGB1P30-201ENST00000492455 NPBQ8NG41 125 aa1.84□□□□□ -2.11
HMGB1P30-201ENST00000492455 PLPPR1Q8TBJ4 325 aa1.84□□□□□ -2.11
HMGB1P30-201ENST00000492455 FANK1Q8TC84 345 aa1.84□□□□□ -2.11
HMGB1P30-201ENST00000492455 SRSF12Q8WXF0 261 aaKnown RBP1.84□□□□□ -2.11
HMGB1P30-201ENST00000492455 IL22RA2Q969J5 263 aa1.84□□□□□ -2.11
HMGB1P30-201ENST00000492455 RNF185Q96GF1 192 aa1.84□□□□□ -2.11
HMGB1P30-201ENST00000492455 SORT1Q99523 831 aa1.84□□□□□ -2.11
HMGB1P30-201ENST00000492455 RASL11BQ9BPW5 248 aa1.84□□□□□ -2.11
HMGB1P30-201ENST00000492455 NRIP2Q9BQI9 281 aa1.84□□□□□ -2.11
HMGB1P30-201ENST00000492455 MFFQ9GZY8 342 aa1.84□□□□□ -2.11
HMGB1P30-201ENST00000492455 ILKAPQ9H0C8 392 aaPredicted RBP1.84□□□□□ -2.11
HMGB1P30-201ENST00000492455 NANOGQ9H9S0 305 aa1.84□□□□□ -2.11
HMGB1P30-201ENST00000492455 SIAEQ9HAT2 523 aa1.84□□□□□ -2.11
HMGB1P30-201ENST00000492455 EML4Q9HC35 981 aaKnown RBP1.84□□□□□ -2.11
HMGB1P30-201ENST00000492455 ADAP2Q9NPF8 381 aa1.84□□□□□ -2.11
HMGB1P30-201ENST00000492455 IL26Q9NPH9 171 aa1.84□□□□□ -2.11
HMGB1P30-201ENST00000492455 INPP5EQ9NRR6 644 aa1.84□□□□□ -2.11
HMGB1P30-201ENST00000492455 CALYQ9NYX4 217 aa1.84□□□□□ -2.11
HMGB1P30-201ENST00000492455 ZNF225Q9UK10 706 aa1.84□□□□□ -2.11
HMGB1P30-201ENST00000492455 STARD10Q9Y365 291 aa1.84□□□□□ -2.11
HMGB1P30-201ENST00000492455 MUC19Q7Z5P9 8384 aa1.84□□□□□ -2.12
HMGB1P30-201ENST00000492455 OR2AG2A6NM03 316 aa1.83□□□□□ -2.12
HMGB1P30-201ENST00000492455 SGK1O00141 431 aa1.83□□□□□ -2.12
HMGB1P30-201ENST00000492455 CCL21O00585 134 aa1.83□□□□□ -2.12
HMGB1P30-201ENST00000492455 RNF13O43567 381 aa1.83□□□□□ -2.12
HMGB1P30-201ENST00000492455 C2P06681 752 aa1.83□□□□□ -2.12
HMGB1P30-201ENST00000492455 TPM2P07951 284 aa1.83□□□□□ -2.12
HMGB1P30-201ENST00000492455 TROVE2P10155 538 aaKnown RBP eCLIP1.83□□□□□ -2.12
HMGB1P30-201ENST00000492455 ABOP16442 354 aa1.83□□□□□ -2.12
HMGB1P30-201ENST00000492455 TNNI1P19237 187 aa1.83□□□□□ -2.12
HMGB1P30-201ENST00000492455 TCN1P20061 433 aaPredicted RBP1.83□□□□□ -2.12
HMGB1P30-201ENST00000492455 CHMLP26374 656 aa1.83□□□□□ -2.12
HMGB1P30-201ENST00000492455 ATP5C1P36542 298 aaKnown RBP1.83□□□□□ -2.12
HMGB1P30-201ENST00000492455 PDIA2Q13087 525 aaKnown RBP1.83□□□□□ -2.12
HMGB1P30-201ENST00000492455 KIAA0087Q14695 138 aa1.83□□□□□ -2.12
HMGB1P30-201ENST00000492455 PPP1R7Q15435 360 aa1.83□□□□□ -2.12
HMGB1P30-201ENST00000492455 TGFBIQ15582 683 aa1.83□□□□□ -2.12
HMGB1P30-201ENST00000492455 ZNF658BQ4V348 819 aaPredicted RBP1.83□□□□□ -2.12
HMGB1P30-201ENST00000492455 VAX1Q5SQQ9 334 aa1.83□□□□□ -2.12
HMGB1P30-201ENST00000492455 PRAMEF20Q5VT98 475 aa1.83□□□□□ -2.12
HMGB1P30-201ENST00000492455 LRRC66Q68CR7 880 aa1.83□□□□□ -2.12
HMGB1P30-201ENST00000492455 KRTAP5-7Q6L8G8 165 aa1.83□□□□□ -2.12
HMGB1P30-201ENST00000492455 Q6P435 159 aa1.83□□□□□ -2.12
HMGB1P30-201ENST00000492455 Q6ZSR3 168 aa1.83□□□□□ -2.12
HMGB1P30-201ENST00000492455 NIPA1Q7RTP0 329 aa1.83□□□□□ -2.12
HMGB1P30-201ENST00000492455 MKXQ8IYA7 352 aa1.83□□□□□ -2.12
HMGB1P30-201ENST00000492455 TTC5Q8N0Z6 440 aa1.83□□□□□ -2.12
HMGB1P30-201ENST00000492455 PUSL1Q8N0Z8 303 aaKnown RBP1.83□□□□□ -2.12
HMGB1P30-201ENST00000492455 BBS5Q8N3I7 341 aa1.83□□□□□ -2.12
HMGB1P30-201ENST00000492455 MS4A15Q8N5U1 240 aa1.83□□□□□ -2.12
HMGB1P30-201ENST00000492455 SPATA4Q8NEY3 305 aa1.83□□□□□ -2.12
HMGB1P30-201ENST00000492455 B3GNT7Q8NFL0 401 aa1.83□□□□□ -2.12
HMGB1P30-201ENST00000492455 VN1R2Q8NFZ6 395 aa1.83□□□□□ -2.12
HMGB1P30-201ENST00000492455 NDRG1Q92597 394 aaKnown RBP1.83□□□□□ -2.12
HMGB1P30-201ENST00000492455 HSFY1Q96LI6 401 aa1.83□□□□□ -2.12
HMGB1P30-201ENST00000492455 OR2M2Q96R28 347 aa1.83□□□□□ -2.12
HMGB1P30-201ENST00000492455 SH3GL1Q99961 368 aa1.83□□□□□ -2.12
HMGB1P30-201ENST00000492455 KCTD14Q9BQ13 255 aaPredicted RBP1.83□□□□□ -2.12
HMGB1P30-201ENST00000492455 TMEM59Q9BXS4 323 aa1.83□□□□□ -2.12
HMGB1P30-201ENST00000492455 ROGDIQ9GZN7 287 aa1.83□□□□□ -2.12
HMGB1P30-201ENST00000492455 MRPL47Q9HD33 250 aaKnown RBP1.83□□□□□ -2.12
HMGB1P30-201ENST00000492455 GLRX2Q9NS18 164 aa1.83□□□□□ -2.12
HMGB1P30-201ENST00000492455 EXD2Q9NVH0 621 aa1.83□□□□□ -2.12
HMGB1P30-201ENST00000492455 XCL2Q9UBD3 114 aa1.83□□□□□ -2.12
HMGB1P30-201ENST00000492455 SLC25A15Q9Y619 301 aa1.83□□□□□ -2.12
HMGB1P30-201ENST00000492455 NSD2O96028 1365 aa1.83□□□□□ -2.12
HMGB1P30-201ENST00000492455 A0A0G2JN53 185 aa1.82□□□□□ -2.12
HMGB1P30-201ENST00000492455 IGHV3-64DA0A0J9YX35 117 aa1.82□□□□□ -2.12
HMGB1P30-201ENST00000492455 TCP11X1B4DZS4 312 aa1.82□□□□□ -2.12
HMGB1P30-201ENST00000492455 ERVV-1B6SEH8 477 aa1.82□□□□□ -2.12
HMGB1P30-201ENST00000492455 SOX15O60248 233 aa1.82□□□□□ -2.12
HMGB1P30-201ENST00000492455 WBP4O75554 376 aaKnown RBP1.82□□□□□ -2.12
HMGB1P30-201ENST00000492455 KLF8O95600 359 aaPredicted RBP1.82□□□□□ -2.12
HMGB1P30-201ENST00000492455 KRT14P02533 472 aa1.82□□□□□ -2.12
HMGB1P30-201ENST00000492455 PRB2P02812 416 aaPredicted RBP1.82□□□□□ -2.12
HMGB1P30-201ENST00000492455 TDGF1P13385 188 aa1.82□□□□□ -2.12
HMGB1P30-201ENST00000492455 CRISP2P16562 243 aa1.82□□□□□ -2.12
HMGB1P30-201ENST00000492455 SLC2A5P22732 501 aa1.82□□□□□ -2.12
HMGB1P30-201ENST00000492455 IFNA8P32881 189 aa1.82□□□□□ -2.12
HMGB1P30-201ENST00000492455 RORAP35398 523 aa1.82□□□□□ -2.12
HMGB1P30-201ENST00000492455 GPR6P46095 362 aaPredicted RBP1.82□□□□□ -2.12
HMGB1P30-201ENST00000492455 TFPI2P48307 235 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms