RNA–Protein interactions for RNA: ENST00000491791.1

USP4-214, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 821 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-214ENST00000491791 TOMM34Q15785 309 aaPredicted RBP9.71□□□□□ -0.86
USP4-214ENST00000491791 CEP78Q5JTW2 689 aa9.71□□□□□ -0.86
USP4-214ENST00000491791 C1orf140Q5VVS0 124 aa9.71□□□□□ -0.86
USP4-214ENST00000491791 DESI1Q6ICB0 168 aa9.71□□□□□ -0.86
USP4-214ENST00000491791 SFXN4Q6P4A7 337 aa9.71□□□□□ -0.86
USP4-214ENST00000491791 CNIH2Q6PI25 160 aa9.71□□□□□ -0.86
USP4-214ENST00000491791 ZNF517Q6ZMY9 492 aaPredicted RBP9.71□□□□□ -0.86
USP4-214ENST00000491791 DBX2Q6ZNG2 339 aa9.71□□□□□ -0.86
USP4-214ENST00000491791 PPP1R3BQ86XI6 285 aa9.71□□□□□ -0.86
USP4-214ENST00000491791 RDH10Q8IZV5 341 aa9.71□□□□□ -0.86
USP4-214ENST00000491791 OR8H2Q8N162 312 aa9.71□□□□□ -0.86
USP4-214ENST00000491791 LSM14AQ8ND56 463 aaKnown RBP9.71□□□□□ -0.86
USP4-214ENST00000491791 DUSP18Q8NEJ0 188 aa9.71□□□□□ -0.86
USP4-214ENST00000491791 MFSD8Q8NHS3 518 aa9.71□□□□□ -0.86
USP4-214ENST00000491791 ZPLD1Q8TCW7 415 aa9.71□□□□□ -0.86
USP4-214ENST00000491791 SNX33Q8WV41 574 aa9.71□□□□□ -0.86
USP4-214ENST00000491791 DEPDC7Q96QD5 511 aa9.71□□□□□ -0.86
USP4-214ENST00000491791 TBX5Q99593 518 aa9.71□□□□□ -0.86
USP4-214ENST00000491791 MRI1Q9BV20 369 aa9.71□□□□□ -0.86
USP4-214ENST00000491791 POTEKPQ9BYX7 375 aa9.71□□□□□ -0.86
USP4-214ENST00000491791 SLC22A4Q9H015 551 aa9.71□□□□□ -0.86
USP4-214ENST00000491791 TXNIPQ9H3M7 391 aa9.71□□□□□ -0.86
USP4-214ENST00000491791 GAREM1Q9H706 876 aa9.71□□□□□ -0.86
USP4-214ENST00000491791 KLHL1Q9NR64 748 aa9.71□□□□□ -0.86
USP4-214ENST00000491791 C14orf119Q9NWQ9 140 aa9.71□□□□□ -0.86
USP4-214ENST00000491791 KLK13Q9UKR3 277 aa9.71□□□□□ -0.86
USP4-214ENST00000491791 ZNF346Q9UL40 294 aaKnown RBP9.71□□□□□ -0.86
USP4-214ENST00000491791 COPS3Q9UNS2 423 aa9.71□□□□□ -0.86
USP4-214ENST00000491791 LHX6Q9UPM6 363 aa9.71□□□□□ -0.86
USP4-214ENST00000491791 EXPH5Q8NEV8 1989 aa9.71□□□□□ -0.86
USP4-214ENST00000491791 DSPP15924 2871 aaKnown RBP9.71□□□□□ -0.86
USP4-214ENST00000491791 SPEGQ15772 3267 aa9.71□□□□□ -0.86
USP4-214ENST00000491791 UNC13CQ8NB66 2214 aa9.7□□□□□ -0.86
USP4-214ENST00000491791 TMEM72A0PK05 275 aa9.7□□□□□ -0.86
USP4-214ENST00000491791 CDC14CA4D256 554 aa9.7□□□□□ -0.86
USP4-214ENST00000491791 PLPP3O14495 311 aa9.7□□□□□ -0.86
USP4-214ENST00000491791 PLA2G10O15496 165 aa9.7□□□□□ -0.86
USP4-214ENST00000491791 SELENOFO60613 162 aa9.7□□□□□ -0.86
USP4-214ENST00000491791 HPGDSO60760 199 aa9.7□□□□□ -0.86
USP4-214ENST00000491791 TMCC2O75069 709 aa9.7□□□□□ -0.86
USP4-214ENST00000491791 CPNE3O75131 537 aaKnown RBP9.7□□□□□ -0.86
USP4-214ENST00000491791 UPK3AO75631 287 aa9.7□□□□□ -0.86
USP4-214ENST00000491791 ZFAND5O76080 213 aa9.7□□□□□ -0.86
USP4-214ENST00000491791 ZNF432O94892 652 aa9.7□□□□□ -0.86
USP4-214ENST00000491791 DLGAP3O95886 979 aa9.7□□□□□ -0.86
USP4-214ENST00000491791 GP1BAP07359 652 aa9.7□□□□□ -0.86
USP4-214ENST00000491791 FBXO45P0C2W1 286 aa9.7□□□□□ -0.86
USP4-214ENST00000491791 PRKCAP17252 672 aa9.7□□□□□ -0.86
USP4-214ENST00000491791 ALOX5APP20292 161 aa9.7□□□□□ -0.86
USP4-214ENST00000491791 FKBP2P26885 142 aaKnown RBP9.7□□□□□ -0.86
USP4-214ENST00000491791 CFPP27918 469 aa9.7□□□□□ -0.86
USP4-214ENST00000491791 RBMS1P29558 406 aaKnown RBP9.7□□□□□ -0.86
USP4-214ENST00000491791 NR4A2P43354 598 aa9.7□□□□□ -0.86
USP4-214ENST00000491791 TMED10P49755 219 aaKnown RBP9.7□□□□□ -0.86
USP4-214ENST00000491791 CAV3P56539 151 aa9.7□□□□□ -0.86
USP4-214ENST00000491791 RPL27P61353 136 aaKnown RBP9.7□□□□□ -0.86
USP4-214ENST00000491791 MC2RQ01718 297 aa9.7□□□□□ -0.86
USP4-214ENST00000491791 INSL4Q14641 139 aa9.7□□□□□ -0.86
USP4-214ENST00000491791 TRIP6Q15654 476 aaKnown RBP9.7□□□□□ -0.86
USP4-214ENST00000491791 ZNF239Q16600 458 aaKnown RBP9.7□□□□□ -0.86
USP4-214ENST00000491791 TP53I3Q53FA7 332 aa9.7□□□□□ -0.86
USP4-214ENST00000491791 AGAP6Q5VW22 663 aa9.7□□□□□ -0.86
USP4-214ENST00000491791 FAM205BPQ63HN1 556 aa9.7□□□□□ -0.86
USP4-214ENST00000491791 PAPD4Q6PIY7 484 aaKnown RBP9.7□□□□□ -0.86
USP4-214ENST00000491791 BAIAP2L2Q6UXY1 529 aa9.7□□□□□ -0.86
USP4-214ENST00000491791 NRARPQ7Z6K4 114 aa9.7□□□□□ -0.86
USP4-214ENST00000491791 UBQLNLQ8IYU4 475 aa9.7□□□□□ -0.86
USP4-214ENST00000491791 OR6V1Q8N148 313 aa9.7□□□□□ -0.86
USP4-214ENST00000491791 ARMC10Q8N2F6 343 aa9.7□□□□□ -0.86
USP4-214ENST00000491791 RFLNBQ8N5W9 214 aa9.7□□□□□ -0.86
USP4-214ENST00000491791 C10orf53Q8N6V4 93 aa9.7□□□□□ -0.86
USP4-214ENST00000491791 ADPRHL1Q8NDY3 354 aa9.7□□□□□ -0.86
USP4-214ENST00000491791 IFI44Q8TCB0 444 aa9.7□□□□□ -0.86
USP4-214ENST00000491791 DUSP19Q8WTR2 217 aa9.7□□□□□ -0.86
USP4-214ENST00000491791 THRSPQ92748 146 aa9.7□□□□□ -0.86
USP4-214ENST00000491791 MAP6Q96JE9 813 aa9.7□□□□□ -0.86
USP4-214ENST00000491791 KLHL15Q96M94 604 aa9.7□□□□□ -0.86
USP4-214ENST00000491791 FRMD6Q96NE9 622 aa9.7□□□□□ -0.86
USP4-214ENST00000491791 AGAP4Q96P64 663 aa9.7□□□□□ -0.86
USP4-214ENST00000491791 SLC7A5P2Q9GIP4 190 aa9.7□□□□□ -0.86
USP4-214ENST00000491791 WDR76Q9H967 626 aa9.7□□□□□ -0.86
USP4-214ENST00000491791 RPRD1BQ9NQG5 326 aaKnown RBP9.7□□□□□ -0.86
USP4-214ENST00000491791 SDHAF3Q9NRP4 125 aa9.7□□□□□ -0.86
USP4-214ENST00000491791 INIPQ9NRY2 104 aa9.7□□□□□ -0.86
USP4-214ENST00000491791 COMMD3Q9UBI1 195 aa9.7□□□□□ -0.86
USP4-214ENST00000491791 PISDQ9UG56 409 aa9.7□□□□□ -0.86
USP4-214ENST00000491791 ZNF281Q9Y2X9 895 aa9.7□□□□□ -0.86
USP4-214ENST00000491791 RP1P56715 2156 aa9.7□□□□□ -0.86
USP4-214ENST00000491791 ASXL3Q9C0F0 2248 aa9.7□□□□□ -0.86
USP4-214ENST00000491791 FASNP49327 2511 aaKnown RBP9.7□□□□□ -0.86
USP4-214ENST00000491791 DMXL2Q8TDJ6 3036 aa9.69□□□□□ -0.86
USP4-214ENST00000491791 TRBV2A0A0J9YWF9 115 aa9.69□□□□□ -0.86
USP4-214ENST00000491791 TRBV5-5A0A0J9YX44 114 aa9.69□□□□□ -0.86
USP4-214ENST00000491791 A0A1W2PRG6 482 aa9.69□□□□□ -0.86
USP4-214ENST00000491791 PRSS37A4D1T9 235 aa9.69□□□□□ -0.86
USP4-214ENST00000491791 A6NIZ1 184 aa9.69□□□□□ -0.86
USP4-214ENST00000491791 ZNF879B4DU55 563 aa9.69□□□□□ -0.86
USP4-214ENST00000491791 D6RAR5 112 aa9.69□□□□□ -0.86
USP4-214ENST00000491791 BOLA2-SMG1P6H3BVE0 249 aa9.69□□□□□ -0.86
USP4-214ENST00000491791 MEN1O00255 615 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms