RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 OR6N1Q8NGY5 312 aa14.29□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 OR52N5Q8NH56 324 aa14.29□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 BOD1Q96IK1 185 aa14.29□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 FAM46AQ96IP4 442 aaKnown RBP14.29□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 HS3ST6Q96QI5 342 aa14.29□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 FUZQ9BT04 418 aa14.29□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 CRLF2Q9HC73 371 aa14.29□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 SLC17A5Q9NRA2 495 aa14.29□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 AMDHD2Q9Y303 409 aa14.29□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 SLC25A15Q9Y619 301 aa14.29□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 TRAV27A0A087WT01 109 aa14.28□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 A0A1W2PPR1 153 aa14.28□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 A0A1W2PR80 420 aa14.28□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 SH3PXD2BA1X283 911 aa14.28□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 NPIPB13A6NJU9 1138 aa14.28□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 NPIPB4C9JG80 1138 aa14.28□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 CDC42EP2O14613 210 aa14.28□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 GSC2O15499 205 aa14.28□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 OMPP47874 163 aa14.28□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 DAP3P51398 398 aaKnown RBP14.28□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 CHRNB3Q05901 458 aa14.28□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 LAPTM4AQ15012 233 aa14.28□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 CEACAM16Q2WEN9 425 aa14.28□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 ANKDD1AQ495B1 522 aa14.28□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 C1QTNF12Q5T7M4 302 aa14.28□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 KLHL24Q6TFL4 600 aa14.28□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 HDDC2Q7Z4H3 204 aa14.28□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 CDH24Q86UP0 819 aa14.28□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 WDR31Q8NA23 367 aa14.28□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 OR51A7Q8NH64 312 aa14.28□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 ASB10Q8WXI3 467 aa14.28□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 ZNF566Q969W8 418 aa14.28□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 SLC25A44Q96H78 314 aaPredicted RBP14.28□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 CADM1Q9BY67 442 aaKnown RBP14.28□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 ULBP2Q9BZM5 246 aa14.28□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 AQP12BA6NM10 295 aa14.27□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 ZNF99A8MXY4 864 aaPredicted RBP14.27□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 LIMS1P48059 325 aa14.27□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 PRPS1P60891 318 aa14.27□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 ARF1P84077 181 aaKnown RBP14.27□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 FHL1Q13642 323 aa14.27□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 FLOT2Q14254 428 aa14.27□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 ACKR1Q16570 336 aa14.27□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 TBRG1Q3YBR2 411 aa14.27□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 ZBED5Q49AG3 693 aa14.27□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 HIKESHIQ53FT3 197 aa14.27□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 NCMAPQ5T1S8 102 aa14.27□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 ANKRD16Q6P6B7 361 aa14.27□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 AQP12AQ8IXF9 295 aa14.27□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 NRGNQ92686 78 aa14.27□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 TMEM54Q969K7 222 aa14.27□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 ZNF837Q96EG3 531 aaPredicted RBP14.27□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 ALPK1Q96QP1 1244 aa14.27□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 TNFRSF13CQ96RJ3 184 aa14.27□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 NDEL1Q9GZM8 345 aa14.27□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 ESRP2Q9H6T0 727 aaKnown RBP14.27□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 PLEKHF2Q9H8W4 249 aa14.27□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 NPAP1Q9NZP6 1156 aa14.27□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 TMCC3Q9ULS5 477 aa14.27□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 AURKCQ9UQB9 309 aa14.27□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 MAGED1Q9Y5V3 778 aaPredicted RBP14.27□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 DCHS2Q6V1P9 2916 aa14.27□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 CENPEQ02224 2701 aa14.26□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 KRT36O76013 467 aa14.26□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 WNT11O96014 354 aa14.26□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 IGHG1P01857 330 aa14.26□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 IGHMP01871 453 aa14.26□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 PGA4P0DJD7 388 aa14.26□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 PGA3P0DJD8 388 aa14.26□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 RAP2AP10114 183 aa14.26□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 CLRN1P58418 232 aa14.26□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 CTXN1P60606 82 aa14.26□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 UBE2NP61088 152 aaKnown RBP14.26□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 TOP3AQ13472 1001 aaPredicted RBP14.26□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 TAF11Q15544 211 aa14.26□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 IGFN1Q86VF2 1251 aa14.26□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 ADGRG5Q8IZF4 528 aa14.26□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 LRRC75AQ8NAA5 344 aa14.26□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 NOXO1Q8NFA2 376 aa14.26□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 MAGEE2Q8TD90 523 aaPredicted RBP14.26□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 BCL2L2Q92843 193 aaPredicted RBP14.26□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 TXNIPQ9H3M7 391 aa14.26□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 NELFAQ9H3P2 528 aa14.26□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 OBP2BQ9NPH6 170 aa14.26□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 GLTPQ9NZD2 209 aa14.26□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 STX18Q9P2W9 335 aaKnown RBP14.26□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 POMPQ9Y244 141 aa14.26□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 POFUT2Q9Y2G5 429 aa14.26□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 LYVE1Q9Y5Y7 322 aa14.26□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 A0A096LPE4 126 aa14.25□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 ARPC4-TTLL3A0A0A6YYG9 625 aa14.25□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 A0A1W2PPZ6 126 aa14.25□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 DHRS12A0PJE2 317 aa14.25□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 CENPBD1B2RD01 187 aa14.25□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 TNFRSF11BO00300 401 aa14.25□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 OR10H3O60404 316 aa14.25□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 TRMUO75648 421 aaKnown RBP14.25□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 CD3EP07766 207 aa14.25□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 HOXB1P14653 301 aaPredicted RBP14.25□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 ACADSP16219 412 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms