RNA–Protein interactions for RNA: ENST00000490696.5

VPS26A-207, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 800 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-207ENST00000490696 MAKP20794 623 aa13.46□□□□□ -0.25
VPS26A-207ENST00000490696 HOXC12P31275 282 aa13.46□□□□□ -0.25
VPS26A-207ENST00000490696 AQP2P41181 271 aa13.46□□□□□ -0.25
VPS26A-207ENST00000490696 ZNF83P51522 516 aa13.46□□□□□ -0.25
VPS26A-207ENST00000490696 ART1P52961 327 aa13.46□□□□□ -0.25
VPS26A-207ENST00000490696 PRPS1P60891 318 aa13.46□□□□□ -0.25
VPS26A-207ENST00000490696 ARF1P84077 181 aaKnown RBP13.46□□□□□ -0.25
VPS26A-207ENST00000490696 PRKCDQ05655 676 aa13.46□□□□□ -0.25
VPS26A-207ENST00000490696 DGCR6Q14129 220 aa13.46□□□□□ -0.25
VPS26A-207ENST00000490696 CEACAM16Q2WEN9 425 aa13.46□□□□□ -0.25
VPS26A-207ENST00000490696 ANKRD16Q6P6B7 361 aa13.46□□□□□ -0.25
VPS26A-207ENST00000490696 TBPL2Q6SJ96 375 aa13.46□□□□□ -0.25
VPS26A-207ENST00000490696 C20orf204Q6ZNR8 217 aa13.46□□□□□ -0.25
VPS26A-207ENST00000490696 MBOAT2Q6ZWT7 520 aa13.46□□□□□ -0.25
VPS26A-207ENST00000490696 RNF113BQ8IZP6 322 aaKnown RBP13.46□□□□□ -0.25
VPS26A-207ENST00000490696 SLC7A13Q8TCU3 470 aa13.46□□□□□ -0.25
VPS26A-207ENST00000490696 MAGEE2Q8TD90 523 aaPredicted RBP13.46□□□□□ -0.25
VPS26A-207ENST00000490696 AKAP1Q92667 903 aaKnown RBP eCLIP13.46□□□□□ -0.25
VPS26A-207ENST00000490696 ADAD1Q96M93 576 aaKnown RBP13.46□□□□□ -0.25
VPS26A-207ENST00000490696 FOXC2Q99958 501 aa13.46□□□□□ -0.25
VPS26A-207ENST00000490696 CXXC4Q9H2H0 198 aa13.46□□□□□ -0.25
VPS26A-207ENST00000490696 OBP2BQ9NPH6 170 aa13.46□□□□□ -0.25
VPS26A-207ENST00000490696 FAM32AQ9Y421 112 aaKnown RBP13.46□□□□□ -0.25
VPS26A-207ENST00000490696 ARID1AO14497 2285 aa13.46□□□□□ -0.26
VPS26A-207ENST00000490696 CELSR1Q9NYQ6 3014 aa13.45□□□□□ -0.26
VPS26A-207ENST00000490696 A0A096LPE4 126 aa13.45□□□□□ -0.26
VPS26A-207ENST00000490696 A0A1W2PPZ6 126 aa13.45□□□□□ -0.26
VPS26A-207ENST00000490696 ZNF99A8MXY4 864 aaPredicted RBP13.45□□□□□ -0.26
VPS26A-207ENST00000490696 CLOCKO15516 846 aa13.45□□□□□ -0.26
VPS26A-207ENST00000490696 DIRAS1O95057 198 aa13.45□□□□□ -0.26
VPS26A-207ENST00000490696 H1F0P07305 194 aaKnown RBP13.45□□□□□ -0.26
VPS26A-207ENST00000490696 CD40P25942 277 aa13.45□□□□□ -0.26
VPS26A-207ENST00000490696 RPS4XP62701 263 aaKnown RBP13.45□□□□□ -0.26
VPS26A-207ENST00000490696 FHL1Q13642 323 aa13.45□□□□□ -0.26
VPS26A-207ENST00000490696 MELKQ14680 651 aa13.45□□□□□ -0.26
VPS26A-207ENST00000490696 DEFB113Q30KQ7 82 aa13.45□□□□□ -0.26
VPS26A-207ENST00000490696 KLHL17Q6TDP4 642 aa13.45□□□□□ -0.26
VPS26A-207ENST00000490696 KLHL24Q6TFL4 600 aa13.45□□□□□ -0.26
VPS26A-207ENST00000490696 TMEM108Q6UXF1 575 aa13.45□□□□□ -0.26
VPS26A-207ENST00000490696 ZNF730Q6ZMV8 503 aa13.45□□□□□ -0.26
VPS26A-207ENST00000490696 MEX3DQ86XN8 651 aaKnown RBP13.45□□□□□ -0.26
VPS26A-207ENST00000490696 KBTBD8Q8NFY9 601 aa13.45□□□□□ -0.26
VPS26A-207ENST00000490696 MOSPD2Q8NHP6 518 aa13.45□□□□□ -0.26
VPS26A-207ENST00000490696 IGFBPL1Q8WX77 278 aa13.45□□□□□ -0.26
VPS26A-207ENST00000490696 NEUROG1Q92886 237 aa13.45□□□□□ -0.26
VPS26A-207ENST00000490696 TMEM54Q969K7 222 aa13.45□□□□□ -0.26
VPS26A-207ENST00000490696 SLC25A44Q96H78 314 aaPredicted RBP13.45□□□□□ -0.26
VPS26A-207ENST00000490696 DHRS1Q96LJ7 313 aa13.45□□□□□ -0.26
VPS26A-207ENST00000490696 ALPK1Q96QP1 1244 aa13.45□□□□□ -0.26
VPS26A-207ENST00000490696 PIP5K1AQ99755 562 aa13.45□□□□□ -0.26
VPS26A-207ENST00000490696 C1QTNF6Q9BXI9 259 aa13.45□□□□□ -0.26
VPS26A-207ENST00000490696 C1orf21Q9H246 121 aa13.45□□□□□ -0.26
VPS26A-207ENST00000490696 TAS2R1Q9NYW7 299 aa13.45□□□□□ -0.26
VPS26A-207ENST00000490696 ACTR3BQ9P1U1 418 aa13.45□□□□□ -0.26
VPS26A-207ENST00000490696 HIF3AQ9Y2N7 669 aa13.45□□□□□ -0.26
VPS26A-207ENST00000490696 MAGED1Q9Y5V3 778 aaPredicted RBP13.45□□□□□ -0.26
VPS26A-207ENST00000490696 MAP1AP78559 2803 aaPredicted RBP13.44□□□□□ -0.26
VPS26A-207ENST00000490696 ARPC4-TTLL3A0A0A6YYG9 625 aa13.44□□□□□ -0.26
VPS26A-207ENST00000490696 SHISA9B4DS77 424 aa13.44□□□□□ -0.26
VPS26A-207ENST00000490696 M0R1B8 84 aa13.44□□□□□ -0.26
VPS26A-207ENST00000490696 ABCD4O14678 606 aa13.44□□□□□ -0.26
VPS26A-207ENST00000490696 UBOX5O94941 541 aa13.44□□□□□ -0.26
VPS26A-207ENST00000490696 BCL10O95999 233 aa13.44□□□□□ -0.26
VPS26A-207ENST00000490696 WNT11O96014 354 aa13.44□□□□□ -0.26
VPS26A-207ENST00000490696 F13BP05160 661 aa13.44□□□□□ -0.26
VPS26A-207ENST00000490696 HOXB1P14653 301 aaPredicted RBP13.44□□□□□ -0.26
VPS26A-207ENST00000490696 ATP6V1B2P21281 511 aa13.44□□□□□ -0.26
VPS26A-207ENST00000490696 PTAFRP25105 342 aa13.44□□□□□ -0.26
VPS26A-207ENST00000490696 CSNK1A1P48729 337 aa13.44□□□□□ -0.26
VPS26A-207ENST00000490696 LAPTM4AQ15012 233 aa13.44□□□□□ -0.26
VPS26A-207ENST00000490696 ZNF672Q499Z4 452 aaPredicted RBP13.44□□□□□ -0.26
VPS26A-207ENST00000490696 PODNL1Q6PEZ8 512 aa13.44□□□□□ -0.26
VPS26A-207ENST00000490696 SPNS3Q6ZMD2 512 aa13.44□□□□□ -0.26
VPS26A-207ENST00000490696 ZNF627Q7L945 461 aa13.44□□□□□ -0.26
VPS26A-207ENST00000490696 ZNF611Q8N823 705 aa13.44□□□□□ -0.26
VPS26A-207ENST00000490696 OR6N1Q8NGY5 312 aa13.44□□□□□ -0.26
VPS26A-207ENST00000490696 FUZQ9BT04 418 aa13.44□□□□□ -0.26
VPS26A-207ENST00000490696 ULBP2Q9BZM5 246 aa13.44□□□□□ -0.26
VPS26A-207ENST00000490696 B3GAT2Q9NPZ5 323 aa13.44□□□□□ -0.26
VPS26A-207ENST00000490696 INIPQ9NRY2 104 aa13.44□□□□□ -0.26
VPS26A-207ENST00000490696 PRPF19Q9UMS4 504 aaKnown RBP13.44□□□□□ -0.26
VPS26A-207ENST00000490696 HIVEP1P15822 2718 aa13.43□□□□□ -0.26
VPS26A-207ENST00000490696 USF3Q68DE3 2245 aa13.43□□□□□ -0.26
VPS26A-207ENST00000490696 A0A1W2PRG6 482 aa13.43□□□□□ -0.26
VPS26A-207ENST00000490696 NPIPB13A6NJU9 1138 aa13.43□□□□□ -0.26
VPS26A-207ENST00000490696 NPIPB4C9JG80 1138 aa13.43□□□□□ -0.26
VPS26A-207ENST00000490696 PDE5AO76074 875 aa13.43□□□□□ -0.26
VPS26A-207ENST00000490696 PGA4P0DJD7 388 aa13.43□□□□□ -0.26
VPS26A-207ENST00000490696 PGA3P0DJD8 388 aa13.43□□□□□ -0.26
VPS26A-207ENST00000490696 SAGP10523 405 aaPredicted RBP13.43□□□□□ -0.26
VPS26A-207ENST00000490696 ITGA2P17301 1181 aa13.43□□□□□ -0.26
VPS26A-207ENST00000490696 UBE2NP61088 152 aaKnown RBP13.43□□□□□ -0.26
VPS26A-207ENST00000490696 MS4A2Q01362 244 aa13.43□□□□□ -0.26
VPS26A-207ENST00000490696 RUNX1T1Q06455 604 aa13.43□□□□□ -0.26
VPS26A-207ENST00000490696 SPOCK1Q08629 439 aa13.43□□□□□ -0.26
VPS26A-207ENST00000490696 TRIM25Q14258 630 aaKnown RBP13.43□□□□□ -0.26
VPS26A-207ENST00000490696 LRFN4Q6PJG9 635 aa13.43□□□□□ -0.26
VPS26A-207ENST00000490696 CYP2R1Q6VVX0 501 aa13.43□□□□□ -0.26
VPS26A-207ENST00000490696 TMPRSS11FQ6ZWK6 438 aa13.43□□□□□ -0.26
VPS26A-207ENST00000490696 LRRC75AQ8NAA5 344 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms