RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 IGHV2-5P01817 119 aa2.47□□□□□ -2.01
CD46-216ENST00000490278 C2P06681 752 aa2.47□□□□□ -2.01
CD46-216ENST00000490278 PLEKP08567 350 aaPredicted RBP2.47□□□□□ -2.01
CD46-216ENST00000490278 RPS2P15880 293 aaKnown RBP2.47□□□□□ -2.01
CD46-216ENST00000490278 HOXA9P31269 272 aa2.47□□□□□ -2.01
CD46-216ENST00000490278 RORAP35398 523 aa2.47□□□□□ -2.01
CD46-216ENST00000490278 GPR6P46095 362 aaPredicted RBP2.47□□□□□ -2.01
CD46-216ENST00000490278 PPOXP50336 477 aa2.47□□□□□ -2.01
CD46-216ENST00000490278 SUCLG1P53597 346 aaKnown RBP2.47□□□□□ -2.01
CD46-216ENST00000490278 SUB1P53999 127 aaKnown RBP eCLIP2.47□□□□□ -2.01
CD46-216ENST00000490278 HERVK_113P61574 105 aa2.47□□□□□ -2.01
CD46-216ENST00000490278 LRRC63Q05C16 580 aa2.47□□□□□ -2.01
CD46-216ENST00000490278 REG3AQ06141 175 aa2.47□□□□□ -2.01
CD46-216ENST00000490278 SMARCB1Q12824 385 aa2.47□□□□□ -2.01
CD46-216ENST00000490278 EIF4EBP2Q13542 120 aaPredicted RBP2.47□□□□□ -2.01
CD46-216ENST00000490278 FZD2Q14332 565 aa2.47□□□□□ -2.01
CD46-216ENST00000490278 GGTLC2Q14390 218 aa2.47□□□□□ -2.01
CD46-216ENST00000490278 GK3PQ14409 553 aa2.47□□□□□ -2.01
CD46-216ENST00000490278 GUCA2BQ16661 112 aa2.47□□□□□ -2.01
CD46-216ENST00000490278 COA6Q5JTJ3 125 aaKnown RBP2.47□□□□□ -2.01
CD46-216ENST00000490278 TSPO2Q5TGU0 170 aa2.47□□□□□ -2.01
CD46-216ENST00000490278 KDM7AQ6ZMT4 941 aa2.47□□□□□ -2.01
CD46-216ENST00000490278 PSTKQ8IV42 348 aaKnown RBP2.47□□□□□ -2.01
CD46-216ENST00000490278 ZNF557Q8N988 423 aaPredicted RBP2.47□□□□□ -2.01
CD46-216ENST00000490278 OR1L6Q8NGR2 347 aa2.47□□□□□ -2.01
CD46-216ENST00000490278 OR2G2Q8NGZ5 317 aa2.47□□□□□ -2.01
CD46-216ENST00000490278 GIMAP1Q8WWP7 306 aa2.47□□□□□ -2.01
CD46-216ENST00000490278 STMN2Q93045 179 aa2.47□□□□□ -2.01
CD46-216ENST00000490278 NT5C3BQ969T7 300 aa2.47□□□□□ -2.01
CD46-216ENST00000490278 ASB9Q96DX5 294 aa2.47□□□□□ -2.01
CD46-216ENST00000490278 KCTD14Q9BQ13 255 aaPredicted RBP2.47□□□□□ -2.01
CD46-216ENST00000490278 SLC17A9Q9BYT1 436 aa2.47□□□□□ -2.01
CD46-216ENST00000490278 GPR61Q9BZJ8 451 aa2.47□□□□□ -2.01
CD46-216ENST00000490278 CDC42EP4Q9H3Q1 356 aaKnown RBP2.47□□□□□ -2.01
CD46-216ENST00000490278 CTPS2Q9NRF8 586 aa2.47□□□□□ -2.01
CD46-216ENST00000490278 SLC7A8Q9UHI5 535 aa2.47□□□□□ -2.01
CD46-216ENST00000490278 PACSIN2Q9UNF0 486 aaPredicted RBP2.47□□□□□ -2.01
CD46-216ENST00000490278 ASB3Q9Y575 518 aa2.47□□□□□ -2.01
CD46-216ENST00000490278 ARHGAP21Q5T5U3 1957 aa2.47□□□□□ -2.01
CD46-216ENST00000490278 SCN2AQ99250 2005 aa2.46□□□□□ -2.02
CD46-216ENST00000490278 PPIAL4EA0A075B759 164 aa2.46□□□□□ -2.02
CD46-216ENST00000490278 SYNJ2BP-COX16A0A087WUM0 186 aa2.46□□□□□ -2.02
CD46-216ENST00000490278 A0A096LNJ9 63 aa2.46□□□□□ -2.02
CD46-216ENST00000490278 ARHGEF35A5YM69 484 aa2.46□□□□□ -2.02
CD46-216ENST00000490278 CCL21O00585 134 aa2.46□□□□□ -2.02
CD46-216ENST00000490278 XKRYO14609 159 aa2.46□□□□□ -2.02
CD46-216ENST00000490278 PSTPIP1O43586 416 aa2.46□□□□□ -2.02
CD46-216ENST00000490278 KRTAP5-8O75690 187 aa2.46□□□□□ -2.02
CD46-216ENST00000490278 PPIAL4FP0DN26 164 aa2.46□□□□□ -2.02
CD46-216ENST00000490278 IGHV3-43DP0DP04 118 aa2.46□□□□□ -2.02
CD46-216ENST00000490278 ZNF32P17041 273 aa2.46□□□□□ -2.02
CD46-216ENST00000490278 NCF2P19878 526 aaPredicted RBP2.46□□□□□ -2.02
CD46-216ENST00000490278 ATP5C1P36542 298 aaKnown RBP2.46□□□□□ -2.02
CD46-216ENST00000490278 TPMTP51580 245 aa2.46□□□□□ -2.02
CD46-216ENST00000490278 UGT2B15P54855 530 aa2.46□□□□□ -2.02
CD46-216ENST00000490278 FGF8P55075 233 aaPredicted RBP2.46□□□□□ -2.02
CD46-216ENST00000490278 FBXW4P57775 412 aa2.46□□□□□ -2.02
CD46-216ENST00000490278 PPIL2Q13356 520 aa2.46□□□□□ -2.02
CD46-216ENST00000490278 DDX39BQ13838 428 aaKnown RBP2.46□□□□□ -2.02
CD46-216ENST00000490278 ARHGAP19Q14CB8 494 aa2.46□□□□□ -2.02
CD46-216ENST00000490278 TMEM183BQ1AE95 376 aa2.46□□□□□ -2.02
CD46-216ENST00000490278 SLC25A48Q6ZT89 311 aaKnown RBP2.46□□□□□ -2.02
CD46-216ENST00000490278 H2AFVQ71UI9 128 aa2.46□□□□□ -2.02
CD46-216ENST00000490278 LINC01551Q86U37 167 aa2.46□□□□□ -2.02
CD46-216ENST00000490278 TMEM183AQ8IXX5 376 aa2.46□□□□□ -2.02
CD46-216ENST00000490278 PUSL1Q8N0Z8 303 aaKnown RBP2.46□□□□□ -2.02
CD46-216ENST00000490278 UBE2J2Q8N2K1 259 aa2.46□□□□□ -2.02
CD46-216ENST00000490278 SDR9C7Q8NEX9 313 aa2.46□□□□□ -2.02
CD46-216ENST00000490278 OR4F6Q8NGB9 312 aa2.46□□□□□ -2.02
CD46-216ENST00000490278 SDR42E1Q8WUS8 393 aa2.46□□□□□ -2.02
CD46-216ENST00000490278 SHC3Q92529 594 aa2.46□□□□□ -2.02
CD46-216ENST00000490278 SGK3Q96BR1 496 aa2.46□□□□□ -2.02
CD46-216ENST00000490278 AURKBQ96GD4 344 aaPredicted RBP2.46□□□□□ -2.02
CD46-216ENST00000490278 SH3GL1Q99961 368 aa2.46□□□□□ -2.02
CD46-216ENST00000490278 DNTTIP1Q9H147 329 aa2.46□□□□□ -2.02
CD46-216ENST00000490278 TM9SF3Q9HD45 589 aa2.46□□□□□ -2.02
CD46-216ENST00000490278 RBAKQ9NYW8 714 aaPredicted RBP2.46□□□□□ -2.02
CD46-216ENST00000490278 IKZF2Q9UKS7 526 aa2.46□□□□□ -2.02
CD46-216ENST00000490278 NACAE9PAV3 2078 aa2.46□□□□□ -2.02
CD46-216ENST00000490278 MSH6P52701 1360 aa2.46□□□□□ -2.02
CD46-216ENST00000490278 MTCL1Q9Y4B5 1905 aaKnown RBP2.45□□□□□ -2.02
CD46-216ENST00000490278 IGLV4-69A0A075B6H9 119 aa2.45□□□□□ -2.02
CD46-216ENST00000490278 IGKV1D-13A0A0B4J2D9 117 aa2.45□□□□□ -2.02
CD46-216ENST00000490278 A0A0U1RQS6 177 aa2.45□□□□□ -2.02
CD46-216ENST00000490278 PRSS37A4D1T9 235 aa2.45□□□□□ -2.02
CD46-216ENST00000490278 ERVV-1B6SEH8 477 aa2.45□□□□□ -2.02
CD46-216ENST00000490278 MPHOSPH10O00566 681 aaKnown RBP2.45□□□□□ -2.02
CD46-216ENST00000490278 MAGEB4O15481 346 aaPredicted RBP2.45□□□□□ -2.02
CD46-216ENST00000490278 SNAI2O43623 268 aa2.45□□□□□ -2.02
CD46-216ENST00000490278 SOX15O60248 233 aa2.45□□□□□ -2.02
CD46-216ENST00000490278 TMEM50AO95807 157 aa2.45□□□□□ -2.02
CD46-216ENST00000490278 SERPINA3P01011 423 aa2.45□□□□□ -2.02
CD46-216ENST00000490278 PRB2P02812 416 aaPredicted RBP2.45□□□□□ -2.02
CD46-216ENST00000490278 IGKV3-11P04433 115 aa2.45□□□□□ -2.02
CD46-216ENST00000490278 IGKV1-13P0DP09 117 aa2.45□□□□□ -2.02
CD46-216ENST00000490278 CNR1P21554 472 aa2.45□□□□□ -2.02
CD46-216ENST00000490278 TAGLN2P37802 199 aaKnown RBP2.45□□□□□ -2.02
CD46-216ENST00000490278 CXCL5P42830 114 aa2.45□□□□□ -2.02
CD46-216ENST00000490278 CRYBB2P43320 205 aa2.45□□□□□ -2.02
CD46-216ENST00000490278 PAX5Q02548 391 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms