RNA–Protein interactions for RNA: ENST00000488927.2

HDAC7-224, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-224ENST00000488927 PDP1Q9P0J1 537 aaPredicted RBP14.1□□□□□ -0.15
HDAC7-224ENST00000488927 NDRG3Q9UGV2 375 aa14.1□□□□□ -0.15
HDAC7-224ENST00000488927 USP9YO00507 2555 aaPredicted RBP14.1□□□□□ -0.15
HDAC7-224ENST00000488927 C19orf84I3L1E1 186 aa14.09□□□□□ -0.15
HDAC7-224ENST00000488927 GASTP01350 101 aa14.09□□□□□ -0.15
HDAC7-224ENST00000488927 IGHV3-9P01782 118 aa14.09□□□□□ -0.15
HDAC7-224ENST00000488927 IGHG1P01857 330 aa14.09□□□□□ -0.15
HDAC7-224ENST00000488927 CD14P08571 375 aa14.09□□□□□ -0.15
HDAC7-224ENST00000488927 ANXA8P13928 327 aa14.09□□□□□ -0.15
HDAC7-224ENST00000488927 IL32P24001 234 aa14.09□□□□□ -0.15
HDAC7-224ENST00000488927 EDNRAP25101 427 aa14.09□□□□□ -0.15
HDAC7-224ENST00000488927 GRNP28799 593 aaKnown RBP14.09□□□□□ -0.15
HDAC7-224ENST00000488927 MPGP29372 298 aa14.09□□□□□ -0.15
HDAC7-224ENST00000488927 RPL27P61353 136 aaKnown RBP14.09□□□□□ -0.15
HDAC7-224ENST00000488927 SP5Q6BEB4 398 aaPredicted RBP14.09□□□□□ -0.15
HDAC7-224ENST00000488927 OR7E24Q6IFN5 339 aa14.09□□□□□ -0.15
HDAC7-224ENST00000488927 CD300LDQ6UXZ3 194 aa14.09□□□□□ -0.15
HDAC7-224ENST00000488927 DPY19L2P2Q6ZN68 376 aa14.09□□□□□ -0.15
HDAC7-224ENST00000488927 CXorf67Q86X51 503 aaPredicted RBP14.09□□□□□ -0.15
HDAC7-224ENST00000488927 HIPK1Q86Z02 1210 aa14.09□□□□□ -0.15
HDAC7-224ENST00000488927 DMRTC2Q8IXT2 367 aaPredicted RBP14.09□□□□□ -0.15
HDAC7-224ENST00000488927 C20orf196Q8IYI0 205 aa14.09□□□□□ -0.15
HDAC7-224ENST00000488927 LRRC75AQ8NAA5 344 aa14.09□□□□□ -0.15
HDAC7-224ENST00000488927 OR6N1Q8NGY5 312 aa14.09□□□□□ -0.15
HDAC7-224ENST00000488927 FNDC8Q8TC99 324 aa14.09□□□□□ -0.15
HDAC7-224ENST00000488927 DNAJC9Q8WXX5 260 aa14.09□□□□□ -0.15
HDAC7-224ENST00000488927 STMN2Q93045 179 aa14.09□□□□□ -0.15
HDAC7-224ENST00000488927 CENPNQ96H22 339 aaPredicted RBP14.09□□□□□ -0.15
HDAC7-224ENST00000488927 GPA33Q99795 319 aa14.09□□□□□ -0.15
HDAC7-224ENST00000488927 EMC6Q9BV81 110 aa14.09□□□□□ -0.15
HDAC7-224ENST00000488927 POLDIP3Q9BY77 421 aaKnown RBP14.09□□□□□ -0.15
HDAC7-224ENST00000488927 ZNF556Q9HAH1 456 aa14.09□□□□□ -0.15
HDAC7-224ENST00000488927 TUBAL3A6NHL2 446 aa14.08□□□□□ -0.16
HDAC7-224ENST00000488927 A6NIZ1 184 aa14.08□□□□□ -0.16
HDAC7-224ENST00000488927 RPL36A-HNRNPH2H7BZ11 118 aa14.08□□□□□ -0.16
HDAC7-224ENST00000488927 PDLIM1O00151 329 aa14.08□□□□□ -0.16
HDAC7-224ENST00000488927 APEHP13798 732 aaKnown RBP14.08□□□□□ -0.16
HDAC7-224ENST00000488927 COX6B1P14854 86 aa14.08□□□□□ -0.16
HDAC7-224ENST00000488927 SLC6A6P31641 620 aa14.08□□□□□ -0.16
HDAC7-224ENST00000488927 KIR2DL3P43628 341 aa14.08□□□□□ -0.16
HDAC7-224ENST00000488927 CSNK1A1P48729 337 aa14.08□□□□□ -0.16
HDAC7-224ENST00000488927 RPS6KA3P51812 740 aa14.08□□□□□ -0.16
HDAC7-224ENST00000488927 IST1P53990 364 aa14.08□□□□□ -0.16
HDAC7-224ENST00000488927 SH3BGRP55822 239 aaPredicted RBP14.08□□□□□ -0.16
HDAC7-224ENST00000488927 RAP1BP61224 184 aa14.08□□□□□ -0.16
HDAC7-224ENST00000488927 RAP1AP62834 184 aa14.08□□□□□ -0.16
HDAC7-224ENST00000488927 CAMK2DQ13557 499 aa14.08□□□□□ -0.16
HDAC7-224ENST00000488927 MELKQ14680 651 aa14.08□□□□□ -0.16
HDAC7-224ENST00000488927 STK11Q15831 433 aa14.08□□□□□ -0.16
HDAC7-224ENST00000488927 RFX4Q33E94 735 aa14.08□□□□□ -0.16
HDAC7-224ENST00000488927 ARMC4Q5T2S8 1044 aa14.08□□□□□ -0.16
HDAC7-224ENST00000488927 C1QTNF12Q5T7M4 302 aa14.08□□□□□ -0.16
HDAC7-224ENST00000488927 GPR139Q6DWJ6 353 aa14.08□□□□□ -0.16
HDAC7-224ENST00000488927 HMBOX1Q6NT76 420 aa14.08□□□□□ -0.16
HDAC7-224ENST00000488927 MEX3BQ6ZN04 569 aaKnown RBP14.08□□□□□ -0.16
HDAC7-224ENST00000488927 ZNF620Q6ZNG0 422 aa14.08□□□□□ -0.16
HDAC7-224ENST00000488927 RASSF6Q6ZTQ3 369 aa14.08□□□□□ -0.16
HDAC7-224ENST00000488927 SVOPLQ8N434 492 aa14.08□□□□□ -0.16
HDAC7-224ENST00000488927 CLDN22Q8N7P3 220 aa14.08□□□□□ -0.16
HDAC7-224ENST00000488927 C1orf162Q8NEQ5 155 aaPredicted RBP14.08□□□□□ -0.16
HDAC7-224ENST00000488927 OR52L1Q8NGH7 329 aa14.08□□□□□ -0.16
HDAC7-224ENST00000488927 OR5K1Q8NHB7 308 aa14.08□□□□□ -0.16
HDAC7-224ENST00000488927 ASB10Q8WXI3 467 aa14.08□□□□□ -0.16
HDAC7-224ENST00000488927 LRTOMTQ8WZ04 291 aa14.08□□□□□ -0.16
HDAC7-224ENST00000488927 FEVQ99581 238 aa14.08□□□□□ -0.16
HDAC7-224ENST00000488927 OR52D1Q9H346 318 aa14.08□□□□□ -0.16
HDAC7-224ENST00000488927 NTN4Q9HB63 628 aa14.08□□□□□ -0.16
HDAC7-224ENST00000488927 NRIP3Q9NQ35 241 aa14.08□□□□□ -0.16
HDAC7-224ENST00000488927 GRHPRQ9UBQ7 328 aa14.08□□□□□ -0.16
HDAC7-224ENST00000488927 CDH10Q9Y6N8 788 aa14.08□□□□□ -0.16
HDAC7-224ENST00000488927 SPTAN1Q13813 2472 aaKnown RBP14.08□□□□□ -0.16
HDAC7-224ENST00000488927 CACNA1CQ13936 2221 aa14.07□□□□□ -0.16
HDAC7-224ENST00000488927 CIB4A0PJX0 185 aa14.07□□□□□ -0.16
HDAC7-224ENST00000488927 ERICH4A6NGS2 130 aa14.07□□□□□ -0.16
HDAC7-224ENST00000488927 ENTPD5O75356 428 aa14.07□□□□□ -0.16
HDAC7-224ENST00000488927 UPK3AO75631 287 aa14.07□□□□□ -0.16
HDAC7-224ENST00000488927 PGA4P0DJD7 388 aa14.07□□□□□ -0.16
HDAC7-224ENST00000488927 PGA3P0DJD8 388 aa14.07□□□□□ -0.16
HDAC7-224ENST00000488927 ACADSP16219 412 aa14.07□□□□□ -0.16
HDAC7-224ENST00000488927 IGHV1-2P23083 117 aa14.07□□□□□ -0.16
HDAC7-224ENST00000488927 CLRN1P58418 232 aa14.07□□□□□ -0.16
HDAC7-224ENST00000488927 CARD17Q5XLA6 110 aa14.07□□□□□ -0.16
HDAC7-224ENST00000488927 BHLHA15Q7RTS1 189 aaPredicted RBP14.07□□□□□ -0.16
HDAC7-224ENST00000488927 TMEM179BQ7Z7N9 219 aa14.07□□□□□ -0.16
HDAC7-224ENST00000488927 P2RY8Q86VZ1 359 aa14.07□□□□□ -0.16
HDAC7-224ENST00000488927 ZDHHC13Q8IUH4 622 aa14.07□□□□□ -0.16
HDAC7-224ENST00000488927 ZNF433Q8N7K0 673 aaPredicted RBP14.07□□□□□ -0.16
HDAC7-224ENST00000488927 GTPBP3Q969Y2 492 aaKnown RBP14.07□□□□□ -0.16
HDAC7-224ENST00000488927 DACH2Q96NX9 599 aa14.07□□□□□ -0.16
HDAC7-224ENST00000488927 ALKBH3Q96Q83 286 aaPredicted RBP14.07□□□□□ -0.16
HDAC7-224ENST00000488927 KATNB1Q9BVA0 655 aa14.07□□□□□ -0.16
HDAC7-224ENST00000488927 OSBPL10Q9BXB5 764 aa14.07□□□□□ -0.16
HDAC7-224ENST00000488927 GLTPQ9NZD2 209 aa14.07□□□□□ -0.16
HDAC7-224ENST00000488927 ZNF346Q9UL40 294 aaKnown RBP14.07□□□□□ -0.16
HDAC7-224ENST00000488927 G3V2T6 193 aa14.06□□□□□ -0.16
HDAC7-224ENST00000488927 M0R3G1 203 aa14.06□□□□□ -0.16
HDAC7-224ENST00000488927 XKRYO14609 159 aa14.06□□□□□ -0.16
HDAC7-224ENST00000488927 IMPA2O14732 288 aa14.06□□□□□ -0.16
HDAC7-224ENST00000488927 IDH3BO43837 385 aa14.06□□□□□ -0.16
HDAC7-224ENST00000488927 AHCYL1O43865 530 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms