RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 IL1RL1Q01638 556 aa12.39□□□□□ -0.43
COL9A2-208ENST00000488463 GABPB1Q06547 395 aaPredicted RBP12.39□□□□□ -0.43
COL9A2-208ENST00000488463 ST3GAL3Q11203 375 aa12.39□□□□□ -0.43
COL9A2-208ENST00000488463 CAMK2DQ13557 499 aa12.39□□□□□ -0.43
COL9A2-208ENST00000488463 IFI44LQ53G44 452 aa12.39□□□□□ -0.43
COL9A2-208ENST00000488463 HMBOX1Q6NT76 420 aa12.39□□□□□ -0.43
COL9A2-208ENST00000488463 KLHL17Q6TDP4 642 aa12.39□□□□□ -0.43
COL9A2-208ENST00000488463 DTX2Q86UW9 622 aa12.39□□□□□ -0.43
COL9A2-208ENST00000488463 PGAM4Q8N0Y7 254 aa12.39□□□□□ -0.43
COL9A2-208ENST00000488463 GPR137CQ8N3F9 429 aa12.39□□□□□ -0.43
COL9A2-208ENST00000488463 OR6X1Q8NH79 312 aa12.39□□□□□ -0.43
COL9A2-208ENST00000488463 SMAP2Q8WU79 429 aaPredicted RBP12.39□□□□□ -0.43
COL9A2-208ENST00000488463 TMEM54Q969K7 222 aa12.39□□□□□ -0.43
COL9A2-208ENST00000488463 RADILQ96JH8 1075 aa12.39□□□□□ -0.43
COL9A2-208ENST00000488463 C7orf34Q96L11 122 aa12.39□□□□□ -0.43
COL9A2-208ENST00000488463 HS6ST2Q96MM7 605 aa12.39□□□□□ -0.43
COL9A2-208ENST00000488463 SEPHS2Q99611 448 aa12.39□□□□□ -0.43
COL9A2-208ENST00000488463 DCAF13Q9NV06 445 aaKnown RBP12.39□□□□□ -0.43
COL9A2-208ENST00000488463 MGAT4BQ9UQ53 548 aa12.39□□□□□ -0.43
COL9A2-208ENST00000488463 MAGED1Q9Y5V3 778 aaPredicted RBP12.39□□□□□ -0.43
COL9A2-208ENST00000488463 IGHV1-18A0A0C4DH31 117 aa12.38□□□□□ -0.43
COL9A2-208ENST00000488463 ZNF99A8MXY4 864 aaPredicted RBP12.38□□□□□ -0.43
COL9A2-208ENST00000488463 M0R1B8 84 aa12.38□□□□□ -0.43
COL9A2-208ENST00000488463 M0R3G1 203 aa12.38□□□□□ -0.43
COL9A2-208ENST00000488463 AKAP8O43823 692 aaKnown RBP12.38□□□□□ -0.43
COL9A2-208ENST00000488463 IGKV3-15P01624 115 aa12.38□□□□□ -0.43
COL9A2-208ENST00000488463 FUT1P19526 365 aa12.38□□□□□ -0.43
COL9A2-208ENST00000488463 PTH2RP49190 550 aa12.38□□□□□ -0.43
COL9A2-208ENST00000488463 CDH11P55287 796 aa12.38□□□□□ -0.43
COL9A2-208ENST00000488463 BIDP55957 195 aa12.38□□□□□ -0.43
COL9A2-208ENST00000488463 RPS4XP62701 263 aaKnown RBP12.38□□□□□ -0.43
COL9A2-208ENST00000488463 TUBA1BP68363 451 aa12.38□□□□□ -0.43
COL9A2-208ENST00000488463 TUBA4AP68366 448 aa12.38□□□□□ -0.43
COL9A2-208ENST00000488463 RPL18Q07020 188 aaKnown RBP12.38□□□□□ -0.43
COL9A2-208ENST00000488463 KRT72Q14CN4 511 aa12.38□□□□□ -0.43
COL9A2-208ENST00000488463 CARD17Q5XLA6 110 aa12.38□□□□□ -0.43
COL9A2-208ENST00000488463 GLYATQ6IB77 296 aa12.38□□□□□ -0.43
COL9A2-208ENST00000488463 LRFN4Q6PJG9 635 aa12.38□□□□□ -0.43
COL9A2-208ENST00000488463 PRSS57Q6UWY2 283 aa12.38□□□□□ -0.43
COL9A2-208ENST00000488463 TUBA1AQ71U36 451 aa12.38□□□□□ -0.43
COL9A2-208ENST00000488463 SLC35D2Q76EJ3 337 aa12.38□□□□□ -0.43
COL9A2-208ENST00000488463 MYPOPQ86VE0 399 aaPredicted RBP12.38□□□□□ -0.43
COL9A2-208ENST00000488463 FAM169BQ8N8A8 192 aa12.38□□□□□ -0.43
COL9A2-208ENST00000488463 MOSPD2Q8NHP6 518 aa12.38□□□□□ -0.43
COL9A2-208ENST00000488463 SGTBQ96EQ0 304 aa12.38□□□□□ -0.43
COL9A2-208ENST00000488463 TRAF4Q9BUZ4 470 aaPredicted RBP12.38□□□□□ -0.43
COL9A2-208ENST00000488463 GRIP2Q9C0E4 1043 aa12.38□□□□□ -0.43
COL9A2-208ENST00000488463 GORASP2Q9H8Y8 452 aa12.38□□□□□ -0.43
COL9A2-208ENST00000488463 SEC61A2Q9H9S3 476 aa12.38□□□□□ -0.43
COL9A2-208ENST00000488463 B3GNT2Q9NY97 397 aa12.38□□□□□ -0.43
COL9A2-208ENST00000488463 CISD1Q9NZ45 108 aaKnown RBP12.38□□□□□ -0.43
COL9A2-208ENST00000488463 ADA2Q9NZK5 511 aa12.38□□□□□ -0.43
COL9A2-208ENST00000488463 ZNF224Q9NZL3 707 aa12.38□□□□□ -0.43
COL9A2-208ENST00000488463 RHCGQ9UBD6 479 aa12.38□□□□□ -0.43
COL9A2-208ENST00000488463 LAMP3Q9UQV4 416 aa12.38□□□□□ -0.43
COL9A2-208ENST00000488463 MED31Q9Y3C7 131 aa12.38□□□□□ -0.43
COL9A2-208ENST00000488463 ENPP4Q9Y6X5 453 aa12.38□□□□□ -0.43
COL9A2-208ENST00000488463 A0A087WUU8 490 aa12.37□□□□□ -0.43
COL9A2-208ENST00000488463 RNF13O43567 381 aa12.37□□□□□ -0.43
COL9A2-208ENST00000488463 SERPINI2O75830 405 aa12.37□□□□□ -0.43
COL9A2-208ENST00000488463 SEC14L2O76054 403 aa12.37□□□□□ -0.43
COL9A2-208ENST00000488463 OR6A2O95222 327 aa12.37□□□□□ -0.43
COL9A2-208ENST00000488463 WNT11O96014 354 aa12.37□□□□□ -0.43
COL9A2-208ENST00000488463 SEMG1P04279 462 aa12.37□□□□□ -0.43
COL9A2-208ENST00000488463 PGA4P0DJD7 388 aa12.37□□□□□ -0.43
COL9A2-208ENST00000488463 PGA3P0DJD8 388 aa12.37□□□□□ -0.43
COL9A2-208ENST00000488463 T-ENOLP0DO92 83 aa12.37□□□□□ -0.43
COL9A2-208ENST00000488463 MAKP20794 623 aa12.37□□□□□ -0.43
COL9A2-208ENST00000488463 AQP2P41181 271 aa12.37□□□□□ -0.43
COL9A2-208ENST00000488463 RUNX1T1Q06455 604 aa12.37□□□□□ -0.43
COL9A2-208ENST00000488463 HIST3H3Q16695 136 aa12.37□□□□□ -0.43
COL9A2-208ENST00000488463 C3orf36Q3SXR2 165 aa12.37□□□□□ -0.43
COL9A2-208ENST00000488463 SHEQ5VZ18 495 aa12.37□□□□□ -0.43
COL9A2-208ENST00000488463 C11orf71Q6IPW1 123 aa12.37□□□□□ -0.43
COL9A2-208ENST00000488463 NANOGNBQ7Z5D8 188 aa12.37□□□□□ -0.43
COL9A2-208ENST00000488463 PIAS4Q8N2W9 510 aaPredicted RBP12.37□□□□□ -0.43
COL9A2-208ENST00000488463 TMEM171Q8WVE6 324 aa12.37□□□□□ -0.43
COL9A2-208ENST00000488463 FAM162AQ96A26 154 aa12.37□□□□□ -0.43
COL9A2-208ENST00000488463 PERPQ96FX8 193 aa12.37□□□□□ -0.43
COL9A2-208ENST00000488463 ADAD1Q96M93 576 aaKnown RBP12.37□□□□□ -0.43
COL9A2-208ENST00000488463 ZNF75AQ96N20 296 aa12.37□□□□□ -0.43
COL9A2-208ENST00000488463 MRPL13Q9BYD1 178 aaKnown RBP12.37□□□□□ -0.43
COL9A2-208ENST00000488463 NOX3Q9HBY0 568 aa12.37□□□□□ -0.43
COL9A2-208ENST00000488463 NDUFAF4Q9P032 175 aa12.37□□□□□ -0.43
COL9A2-208ENST00000488463 HIF3AQ9Y2N7 669 aa12.37□□□□□ -0.43
COL9A2-208ENST00000488463 HTR3EA5X5Y0 456 aa12.36□□□□□ -0.43
COL9A2-208ENST00000488463 NPIPB13A6NJU9 1138 aa12.36□□□□□ -0.43
COL9A2-208ENST00000488463 ZNF726A6NNF4 738 aa12.36□□□□□ -0.43
COL9A2-208ENST00000488463 NPIPB4C9JG80 1138 aa12.36□□□□□ -0.43
COL9A2-208ENST00000488463 ATP6V1G2-DDX39BF2Z307 99 aa12.36□□□□□ -0.43
COL9A2-208ENST00000488463 BLOC1S5-TXNDC5H3BN57 136 aa12.36□□□□□ -0.43
COL9A2-208ENST00000488463 EBAG9O00559 213 aa12.36□□□□□ -0.43
COL9A2-208ENST00000488463 F13BP05160 661 aa12.36□□□□□ -0.43
COL9A2-208ENST00000488463 CELA3BP08861 270 aa12.36□□□□□ -0.43
COL9A2-208ENST00000488463 UMPSP11172 480 aa12.36□□□□□ -0.43
COL9A2-208ENST00000488463 CD99P14209 185 aa12.36□□□□□ -0.43
COL9A2-208ENST00000488463 MSX2P35548 267 aaPredicted RBP12.36□□□□□ -0.43
COL9A2-208ENST00000488463 CSNK1A1P48729 337 aa12.36□□□□□ -0.43
COL9A2-208ENST00000488463 MNAT1P51948 309 aa12.36□□□□□ -0.43
COL9A2-208ENST00000488463 VLDLRP98155 873 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms