RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 TDGF1P13385 188 aa2.48□□□□□ -2.01
HMGB1P36-201ENST00000487709 ATP1B2P14415 290 aaPredicted RBP2.48□□□□□ -2.01
HMGB1P36-201ENST00000487709 RCC1P18754 421 aaPredicted RBP2.48□□□□□ -2.01
HMGB1P36-201ENST00000487709 CRYBB2P43320 205 aa2.48□□□□□ -2.01
HMGB1P36-201ENST00000487709 GPR6P46095 362 aaPredicted RBP2.48□□□□□ -2.01
HMGB1P36-201ENST00000487709 NMUP48645 174 aa2.48□□□□□ -2.01
HMGB1P36-201ENST00000487709 TDGF1P3P51864 188 aa2.48□□□□□ -2.01
HMGB1P36-201ENST00000487709 SUCLG1P53597 346 aaKnown RBP2.48□□□□□ -2.01
HMGB1P36-201ENST00000487709 ACTR3P61158 418 aa2.48□□□□□ -2.01
HMGB1P36-201ENST00000487709 KCNJ2P63252 427 aa2.48□□□□□ -2.01
HMGB1P36-201ENST00000487709 MECOMQ03112 1051 aa2.48□□□□□ -2.01
HMGB1P36-201ENST00000487709 LRRC63Q05C16 580 aa2.48□□□□□ -2.01
HMGB1P36-201ENST00000487709 PDIA2Q13087 525 aaKnown RBP2.48□□□□□ -2.01
HMGB1P36-201ENST00000487709 PRAMEF5Q5TYX0 476 aa2.48□□□□□ -2.01
HMGB1P36-201ENST00000487709 PRAMEF6Q5VXH4 476 aa2.48□□□□□ -2.01
HMGB1P36-201ENST00000487709 CTRB2Q6GPI1 263 aa2.48□□□□□ -2.01
HMGB1P36-201ENST00000487709 RFLNAQ6ZTI6 216 aa2.48□□□□□ -2.01
HMGB1P36-201ENST00000487709 TAS2R42Q7RTR8 314 aa2.48□□□□□ -2.01
HMGB1P36-201ENST00000487709 ZNF786Q8N393 782 aa2.48□□□□□ -2.01
HMGB1P36-201ENST00000487709 GEMIN6Q8WXD5 167 aaKnown RBP2.48□□□□□ -2.01
HMGB1P36-201ENST00000487709 FBXO32Q969P5 355 aa2.48□□□□□ -2.01
HMGB1P36-201ENST00000487709 FMO2Q99518 471 aa2.48□□□□□ -2.01
HMGB1P36-201ENST00000487709 SH3GL3Q99963 347 aa2.48□□□□□ -2.01
HMGB1P36-201ENST00000487709 HDHD3Q9BSH5 251 aaPredicted RBP2.48□□□□□ -2.01
HMGB1P36-201ENST00000487709 LY9Q9HBG7 655 aa2.48□□□□□ -2.01
HMGB1P36-201ENST00000487709 MYOZ2Q9NPC6 264 aa2.48□□□□□ -2.01
HMGB1P36-201ENST00000487709 CTPS2Q9NRF8 586 aa2.48□□□□□ -2.01
HMGB1P36-201ENST00000487709 KLHL28Q9NXS3 571 aa2.48□□□□□ -2.01
HMGB1P36-201ENST00000487709 SLC2A8Q9NY64 477 aa2.48□□□□□ -2.01
HMGB1P36-201ENST00000487709 OR12D3Q9UGF7 316 aa2.48□□□□□ -2.01
HMGB1P36-201ENST00000487709 ZNF639Q9UID6 485 aa2.48□□□□□ -2.01
HMGB1P36-201ENST00000487709 NUP50Q9UKX7 468 aa2.48□□□□□ -2.01
HMGB1P36-201ENST00000487709 PACSIN2Q9UNF0 486 aaPredicted RBP2.48□□□□□ -2.01
HMGB1P36-201ENST00000487709 NEU3Q9UQ49 428 aa2.48□□□□□ -2.01
HMGB1P36-201ENST00000487709 WSB1Q9Y6I7 421 aa2.48□□□□□ -2.01
HMGB1P36-201ENST00000487709 PRSS37A4D1T9 235 aa2.47□□□□□ -2.01
HMGB1P36-201ENST00000487709 CCL21O00585 134 aa2.47□□□□□ -2.01
HMGB1P36-201ENST00000487709 TRAF3IP2O43734 574 aaPredicted RBP2.47□□□□□ -2.01
HMGB1P36-201ENST00000487709 SPAG7O75391 227 aa2.47□□□□□ -2.01
HMGB1P36-201ENST00000487709 SERPINA3P01011 423 aa2.47□□□□□ -2.01
HMGB1P36-201ENST00000487709 IGHDP01880 384 aa2.47□□□□□ -2.01
HMGB1P36-201ENST00000487709 GAPDHP04406 335 aaKnown RBP2.47□□□□□ -2.01
HMGB1P36-201ENST00000487709 TPM2P07951 284 aa2.47□□□□□ -2.01
HMGB1P36-201ENST00000487709 ZDHHC11BP0C7U3 371 aa2.47□□□□□ -2.01
HMGB1P36-201ENST00000487709 SMIM10L1P0DMW3 83 aa2.47□□□□□ -2.01
HMGB1P36-201ENST00000487709 TOP1P11387 765 aaKnown RBP2.47□□□□□ -2.01
HMGB1P36-201ENST00000487709 ETS2P15036 469 aa2.47□□□□□ -2.01
HMGB1P36-201ENST00000487709 CASP14P31944 242 aa2.47□□□□□ -2.01
HMGB1P36-201ENST00000487709 VHLP40337 213 aa2.47□□□□□ -2.01
HMGB1P36-201ENST00000487709 PAX5Q02548 391 aa2.47□□□□□ -2.01
HMGB1P36-201ENST00000487709 BST2Q10589 180 aaKnown RBP2.47□□□□□ -2.01
HMGB1P36-201ENST00000487709 KCTD19Q17RG1 926 aaPredicted RBP2.47□□□□□ -2.01
HMGB1P36-201ENST00000487709 TMEM179Q6ZVK1 233 aa2.47□□□□□ -2.01
HMGB1P36-201ENST00000487709 PSTKQ8IV42 348 aaKnown RBP2.47□□□□□ -2.01
HMGB1P36-201ENST00000487709 MREGQ8N565 214 aa2.47□□□□□ -2.01
HMGB1P36-201ENST00000487709 ZNF557Q8N988 423 aaPredicted RBP2.47□□□□□ -2.01
HMGB1P36-201ENST00000487709 NPBQ8NG41 125 aa2.47□□□□□ -2.01
HMGB1P36-201ENST00000487709 OR9K2Q8NGE7 335 aa2.47□□□□□ -2.01
HMGB1P36-201ENST00000487709 FGF14Q92915 247 aa2.47□□□□□ -2.01
HMGB1P36-201ENST00000487709 ASB9Q96DX5 294 aa2.47□□□□□ -2.01
HMGB1P36-201ENST00000487709 SMIM10Q96HG1 83 aa2.47□□□□□ -2.01
HMGB1P36-201ENST00000487709 GON7Q9BXV9 100 aa2.47□□□□□ -2.01
HMGB1P36-201ENST00000487709 SLC17A9Q9BYT1 436 aa2.47□□□□□ -2.01
HMGB1P36-201ENST00000487709 ILKAPQ9H0C8 392 aaPredicted RBP2.47□□□□□ -2.01
HMGB1P36-201ENST00000487709 SPATA7Q9P0W8 599 aa2.47□□□□□ -2.01
HMGB1P36-201ENST00000487709 PSMC3IPQ9P2W1 217 aaPredicted RBP2.47□□□□□ -2.01
HMGB1P36-201ENST00000487709 KLK12Q9UKR0 248 aa2.47□□□□□ -2.01
HMGB1P36-201ENST00000487709 HPCAL4Q9UM19 191 aa2.47□□□□□ -2.01
HMGB1P36-201ENST00000487709 RLFQ13129 1914 aa2.46□□□□□ -2.02
HMGB1P36-201ENST00000487709 SCN2AQ99250 2005 aa2.46□□□□□ -2.02
HMGB1P36-201ENST00000487709 IGLV11-55A0A075B6I3 123 aa2.46□□□□□ -2.02
HMGB1P36-201ENST00000487709 IGHV3-64DA0A0J9YX35 117 aa2.46□□□□□ -2.02
HMGB1P36-201ENST00000487709 TRIM64CA6NLI5 447 aa2.46□□□□□ -2.02
HMGB1P36-201ENST00000487709 GOSR2O14653 212 aa2.46□□□□□ -2.02
HMGB1P36-201ENST00000487709 MED6O75586 246 aa2.46□□□□□ -2.02
HMGB1P36-201ENST00000487709 TMEM50AO95807 157 aa2.46□□□□□ -2.02
HMGB1P36-201ENST00000487709 IGKV3-11P04433 115 aa2.46□□□□□ -2.02
HMGB1P36-201ENST00000487709 PCCAP05165 728 aaPredicted RBP2.46□□□□□ -2.02
HMGB1P36-201ENST00000487709 SERPIND1P05546 499 aa2.46□□□□□ -2.02
HMGB1P36-201ENST00000487709 HOXC4P09017 264 aaPredicted RBP2.46□□□□□ -2.02
HMGB1P36-201ENST00000487709 EIF2S2P20042 333 aaKnown RBP2.46□□□□□ -2.02
HMGB1P36-201ENST00000487709 CHMLP26374 656 aa2.46□□□□□ -2.02
HMGB1P36-201ENST00000487709 AK4P27144 223 aaPredicted RBP2.46□□□□□ -2.02
HMGB1P36-201ENST00000487709 TNNT2P45379 298 aaPredicted RBP2.46□□□□□ -2.02
HMGB1P36-201ENST00000487709 RPS10P46783 165 aaKnown RBP2.46□□□□□ -2.02
HMGB1P36-201ENST00000487709 TPMTP51580 245 aa2.46□□□□□ -2.02
HMGB1P36-201ENST00000487709 FBXW4P57775 412 aa2.46□□□□□ -2.02
HMGB1P36-201ENST00000487709 C16orf72Q14CZ0 275 aa2.46□□□□□ -2.02
HMGB1P36-201ENST00000487709 TSPO2Q5TGU0 170 aa2.46□□□□□ -2.02
HMGB1P36-201ENST00000487709 LCN12Q6JVE5 192 aa2.46□□□□□ -2.02
HMGB1P36-201ENST00000487709 C1orf94Q6P1W5 598 aa2.46□□□□□ -2.02
HMGB1P36-201ENST00000487709 DUSP18Q8NEJ0 188 aa2.46□□□□□ -2.02
HMGB1P36-201ENST00000487709 OR8J1Q8NGP2 316 aa2.46□□□□□ -2.02
HMGB1P36-201ENST00000487709 RHEBL1Q8TAI7 183 aa2.46□□□□□ -2.02
HMGB1P36-201ENST00000487709 GPR151Q8TDV0 419 aa2.46□□□□□ -2.02
HMGB1P36-201ENST00000487709 N4BP2L2Q92802 583 aaPredicted RBP2.46□□□□□ -2.02
HMGB1P36-201ENST00000487709 STARD4Q96DR4 205 aa2.46□□□□□ -2.02
HMGB1P36-201ENST00000487709 MS4A4EQ96PG1 132 aa2.46□□□□□ -2.02
HMGB1P36-201ENST00000487709 TMEM59Q9BXS4 323 aa2.46□□□□□ -2.02
HMGB1P36-201ENST00000487709 IFI27L2Q9H2X8 130 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms