RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 CDH20Q9HBT6 801 aa6.49□□□□□ -1.37
PDPN-205ENST00000487038 PSMC3IPQ9P2W1 217 aaPredicted RBP6.49□□□□□ -1.37
PDPN-205ENST00000487038 MARCOQ9UEW3 520 aaPredicted RBP6.49□□□□□ -1.37
PDPN-205ENST00000487038 OR5V1Q9UGF6 321 aa6.49□□□□□ -1.37
PDPN-205ENST00000487038 KLHL21Q9UJP4 597 aa6.49□□□□□ -1.37
PDPN-205ENST00000487038 LEF1Q9UJU2 399 aaPredicted RBP6.49□□□□□ -1.37
PDPN-205ENST00000487038 EMCNQ9ULC0 261 aa6.49□□□□□ -1.37
PDPN-205ENST00000487038 INSIG2Q9Y5U4 225 aa6.49□□□□□ -1.37
PDPN-205ENST00000487038 GPR45Q9Y5Y3 372 aa6.49□□□□□ -1.37
PDPN-205ENST00000487038 COL7A1Q02388 2944 aa6.49□□□□□ -1.37
PDPN-205ENST00000487038 FAM181BA6NEQ2 426 aa6.48□□□□□ -1.37
PDPN-205ENST00000487038 FTCDNL1E5RQL4 147 aa6.48□□□□□ -1.37
PDPN-205ENST00000487038 HOXA3O43365 443 aaPredicted RBP6.48□□□□□ -1.37
PDPN-205ENST00000487038 OR2T1O43869 369 aa6.48□□□□□ -1.37
PDPN-205ENST00000487038 ERLIN1O75477 346 aa6.48□□□□□ -1.37
PDPN-205ENST00000487038 NDUFA7O95182 113 aa6.48□□□□□ -1.37
PDPN-205ENST00000487038 CLPTM1O96005 669 aa6.48□□□□□ -1.37
PDPN-205ENST00000487038 PTHP01270 115 aa6.48□□□□□ -1.37
PDPN-205ENST00000487038 PROCP04070 461 aa6.48□□□□□ -1.37
PDPN-205ENST00000487038 SERPINA5P05154 406 aa6.48□□□□□ -1.37
PDPN-205ENST00000487038 ABHD2P08910 425 aa6.48□□□□□ -1.37
PDPN-205ENST00000487038 FAM157BP0CG42 384 aa6.48□□□□□ -1.37
PDPN-205ENST00000487038 PPIAL4GP0DN37 164 aa6.48□□□□□ -1.37
PDPN-205ENST00000487038 CPA3P15088 417 aa6.48□□□□□ -1.37
PDPN-205ENST00000487038 ZNF250P15622 560 aa6.48□□□□□ -1.37
PDPN-205ENST00000487038 ZNF12P17014 697 aa6.48□□□□□ -1.37
PDPN-205ENST00000487038 RPS4Y1P22090 263 aaKnown RBP6.48□□□□□ -1.37
PDPN-205ENST00000487038 ZNF81P51508 661 aa6.48□□□□□ -1.37
PDPN-205ENST00000487038 RPL15P61313 204 aaKnown RBP6.48□□□□□ -1.37
PDPN-205ENST00000487038 CKAP4Q07065 602 aaKnown RBP6.48□□□□□ -1.37
PDPN-205ENST00000487038 RAB39AQ14964 217 aa6.48□□□□□ -1.37
PDPN-205ENST00000487038 MFSD13AQ14CX5 517 aa6.48□□□□□ -1.37
PDPN-205ENST00000487038 CHI3L2Q15782 390 aa6.48□□□□□ -1.37
PDPN-205ENST00000487038 TSTQ16762 297 aaKnown RBP6.48□□□□□ -1.37
PDPN-205ENST00000487038 TBC1D28Q2M2D7 210 aa6.48□□□□□ -1.37
PDPN-205ENST00000487038 LIN52Q52LA3 116 aa6.48□□□□□ -1.37
PDPN-205ENST00000487038 ESCO2Q56NI9 601 aa6.48□□□□□ -1.37
PDPN-205ENST00000487038 XKR7Q5GH72 579 aa6.48□□□□□ -1.37
PDPN-205ENST00000487038 ZMAT1Q5H9K5 638 aa6.48□□□□□ -1.37
PDPN-205ENST00000487038 IL23RQ5VWK5 629 aa6.48□□□□□ -1.37
PDPN-205ENST00000487038 ATG16L1Q676U5 607 aa6.48□□□□□ -1.37
PDPN-205ENST00000487038 OR4F3Q6IEY1 312 aa6.48□□□□□ -1.37
PDPN-205ENST00000487038 FIP1L1Q6UN15 594 aaKnown RBP6.48□□□□□ -1.37
PDPN-205ENST00000487038 BTNL3Q6UXE8 466 aa6.48□□□□□ -1.37
PDPN-205ENST00000487038 UNQ6126/PRO20091Q6UXV3 157 aa6.48□□□□□ -1.37
PDPN-205ENST00000487038 LRRC74BQ6ZQY2 392 aa6.48□□□□□ -1.37
PDPN-205ENST00000487038 RNF130Q86XS8 419 aa6.48□□□□□ -1.37
PDPN-205ENST00000487038 UEVLDQ8IX04 471 aa6.48□□□□□ -1.37
PDPN-205ENST00000487038 RIMKLAQ8IXN7 391 aa6.48□□□□□ -1.37
PDPN-205ENST00000487038 TMEM123Q8N131 208 aa6.48□□□□□ -1.37
PDPN-205ENST00000487038 KDM8Q8N371 416 aa6.48□□□□□ -1.37
PDPN-205ENST00000487038 ICA1LQ8NDH6 482 aa6.48□□□□□ -1.37
PDPN-205ENST00000487038 SLC30A7Q8NEW0 376 aa6.48□□□□□ -1.37
PDPN-205ENST00000487038 OR1J2Q8NGS2 313 aa6.48□□□□□ -1.37
PDPN-205ENST00000487038 PNPT1Q8TCS8 783 aaKnown RBP6.48□□□□□ -1.37
PDPN-205ENST00000487038 TAF15Q92804 592 aaKnown RBP eCLIP6.48□□□□□ -1.37
PDPN-205ENST00000487038 ZG16BQ96DA0 208 aa6.48□□□□□ -1.37
PDPN-205ENST00000487038 NEURL3Q96EH8 262 aa6.48□□□□□ -1.37
PDPN-205ENST00000487038 LRR1Q96L50 414 aa6.48□□□□□ -1.37
PDPN-205ENST00000487038 ZNF75AQ96N20 296 aa6.48□□□□□ -1.37
PDPN-205ENST00000487038 MECRQ9BV79 373 aa6.48□□□□□ -1.37
PDPN-205ENST00000487038 ULBP2Q9BZM5 246 aa6.48□□□□□ -1.37
PDPN-205ENST00000487038 LRMDAQ9H2I8 198 aa6.48□□□□□ -1.37
PDPN-205ENST00000487038 ARMC7Q9H6L4 198 aa6.48□□□□□ -1.37
PDPN-205ENST00000487038 MTHFD2LQ9H903 347 aaPredicted RBP6.48□□□□□ -1.37
PDPN-205ENST00000487038 CGGBP1Q9UFW8 167 aaPredicted RBP6.48□□□□□ -1.37
PDPN-205ENST00000487038 IL20RAQ9UHF4 553 aa6.48□□□□□ -1.37
PDPN-205ENST00000487038 POLR3KQ9Y2Y1 108 aaPredicted RBP6.48□□□□□ -1.37
PDPN-205ENST00000487038 NOTCH3Q9UM47 2321 aa6.47□□□□□ -1.37
PDPN-205ENST00000487038 TRAV40A0A0B4J280 105 aa6.47□□□□□ -1.37
PDPN-205ENST00000487038 CDHR4A6H8M9 788 aa6.47□□□□□ -1.37
PDPN-205ENST00000487038 A8MXK9 166 aa6.47□□□□□ -1.37
PDPN-205ENST00000487038 SRRM5B3KS81 715 aa6.47□□□□□ -1.37
PDPN-205ENST00000487038 HMGN4O00479 90 aa6.47□□□□□ -1.37
PDPN-205ENST00000487038 PLIN3O60664 434 aa6.47□□□□□ -1.37
PDPN-205ENST00000487038 NPIPB7O75200 414 aa6.47□□□□□ -1.37
PDPN-205ENST00000487038 FARS2O95363 451 aaKnown RBP6.47□□□□□ -1.37
PDPN-205ENST00000487038 CPSF4O95639 269 aaKnown RBP6.47□□□□□ -1.37
PDPN-205ENST00000487038 SNAP29O95721 258 aa6.47□□□□□ -1.37
PDPN-205ENST00000487038 FGF4P08620 206 aa6.47□□□□□ -1.37
PDPN-205ENST00000487038 GKN3PP0CG01 181 aa6.47□□□□□ -1.37
PDPN-205ENST00000487038 OR8G3PP0DMU2 310 aa6.47□□□□□ -1.37
PDPN-205ENST00000487038 NR2F1P10589 423 aa6.47□□□□□ -1.37
PDPN-205ENST00000487038 NQO1P15559 274 aaKnown RBP6.47□□□□□ -1.37
PDPN-205ENST00000487038 MAKP20794 623 aa6.47□□□□□ -1.37
PDPN-205ENST00000487038 GCAP28676 217 aa6.47□□□□□ -1.37
PDPN-205ENST00000487038 LIPAP38571 399 aa6.47□□□□□ -1.37
PDPN-205ENST00000487038 GLO1Q04760 184 aa6.47□□□□□ -1.37
PDPN-205ENST00000487038 PMS2P3Q13401 168 aa6.47□□□□□ -1.37
PDPN-205ENST00000487038 SYPL1Q16563 259 aa6.47□□□□□ -1.37
PDPN-205ENST00000487038 C6orf136Q5SQH8 315 aa6.47□□□□□ -1.37
PDPN-205ENST00000487038 FAM69AQ5T7M9 428 aa6.47□□□□□ -1.37
PDPN-205ENST00000487038 ANXA8L1Q5VT79 327 aa6.47□□□□□ -1.37
PDPN-205ENST00000487038 CARD17Q5XLA6 110 aa6.47□□□□□ -1.37
PDPN-205ENST00000487038 ASPHD2Q6ICH7 369 aa6.47□□□□□ -1.37
PDPN-205ENST00000487038 TMEM53Q6P2H8 277 aa6.47□□□□□ -1.37
PDPN-205ENST00000487038 RHOUQ7L0Q8 258 aa6.47□□□□□ -1.37
PDPN-205ENST00000487038 PIWIL3Q7Z3Z3 882 aaKnown RBP6.47□□□□□ -1.37
PDPN-205ENST00000487038 DPPA2Q7Z7J5 298 aa6.47□□□□□ -1.37
PDPN-205ENST00000487038 C20orf196Q8IYI0 205 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms