RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 TTYH1Q9H313 450 aaPredicted RBP12.08□□□□□ -0.48
HMGN1-216ENST00000486741 MGAT4CQ9UBM8 478 aa12.08□□□□□ -0.48
HMGN1-216ENST00000486741 PCOLCE2Q9UKZ9 415 aa12.08□□□□□ -0.48
HMGN1-216ENST00000486741 EMC9Q9Y3B6 208 aa12.08□□□□□ -0.48
HMGN1-216ENST00000486741 A3GALT2U3KPV4 340 aa12.08□□□□□ -0.48
HMGN1-216ENST00000486741 TCF20Q9UGU0 1960 aaKnown RBP12.08□□□□□ -0.48
HMGN1-216ENST00000486741 ARPC1BO15143 372 aaKnown RBP12.08□□□□□ -0.48
HMGN1-216ENST00000486741 IL33O95760 270 aa12.08□□□□□ -0.48
HMGN1-216ENST00000486741 WDPCPO95876 746 aa12.08□□□□□ -0.48
HMGN1-216ENST00000486741 CSTBP04080 98 aaKnown RBP12.08□□□□□ -0.48
HMGN1-216ENST00000486741 MTNR1BP49286 362 aa12.08□□□□□ -0.48
HMGN1-216ENST00000486741 CCR6P51684 374 aa12.08□□□□□ -0.48
HMGN1-216ENST00000486741 UBE2IP63279 158 aaKnown RBP12.08□□□□□ -0.48
HMGN1-216ENST00000486741 EEF1A1P68104 462 aaKnown RBP12.08□□□□□ -0.48
HMGN1-216ENST00000486741 CDNFQ49AH0 187 aa12.08□□□□□ -0.48
HMGN1-216ENST00000486741 FAM69AQ5T7M9 428 aa12.08□□□□□ -0.48
HMGN1-216ENST00000486741 C10orf90Q96M02 699 aa12.08□□□□□ -0.48
HMGN1-216ENST00000486741 SLC6A7Q99884 636 aa12.08□□□□□ -0.48
HMGN1-216ENST00000486741 POLHQ9Y253 713 aa12.08□□□□□ -0.48
HMGN1-216ENST00000486741 IFNGR1P15260 489 aa12.07□□□□□ -0.48
HMGN1-216ENST00000486741 RBM34P42696 430 aaKnown RBP12.07□□□□□ -0.48
HMGN1-216ENST00000486741 C17orf67Q0P5P2 114 aa12.07□□□□□ -0.48
HMGN1-216ENST00000486741 SHISA5Q8N114 240 aa12.07□□□□□ -0.48
HMGN1-216ENST00000486741 PLPP7Q8NBV4 271 aa12.07□□□□□ -0.48
HMGN1-216ENST00000486741 OR51D1Q8NGF3 324 aa12.07□□□□□ -0.48
HMGN1-216ENST00000486741 OR2T35Q8NGX2 323 aa12.07□□□□□ -0.48
HMGN1-216ENST00000486741 STRADBQ9C0K7 418 aa12.07□□□□□ -0.48
HMGN1-216ENST00000486741 SMOC1Q9H4F8 434 aa12.07□□□□□ -0.48
HMGN1-216ENST00000486741 TTC28Q96AY4 2481 aa12.07□□□□□ -0.48
HMGN1-216ENST00000486741 SYPP08247 313 aa12.07□□□□□ -0.48
HMGN1-216ENST00000486741 ANXA3P12429 323 aa12.07□□□□□ -0.48
HMGN1-216ENST00000486741 SNU13P55769 128 aaKnown RBP12.07□□□□□ -0.48
HMGN1-216ENST00000486741 SLC25A35Q3KQZ1 300 aa12.07□□□□□ -0.48
HMGN1-216ENST00000486741 C9orf135Q5VTT2 229 aa12.07□□□□□ -0.48
HMGN1-216ENST00000486741 C1QL3Q5VWW1 255 aa12.07□□□□□ -0.48
HMGN1-216ENST00000486741 KANSL1Q7Z3B3 1105 aa12.07□□□□□ -0.48
HMGN1-216ENST00000486741 ABHD12BQ7Z5M8 362 aaPredicted RBP12.07□□□□□ -0.48
HMGN1-216ENST00000486741 CMIPQ8IY22 773 aa12.07□□□□□ -0.48
HMGN1-216ENST00000486741 FYTTD1Q96QD9 318 aaKnown RBP12.07□□□□□ -0.48
HMGN1-216ENST00000486741 LDAHQ9H6V9 325 aa12.07□□□□□ -0.48
HMGN1-216ENST00000486741 SIAEQ9HAT2 523 aa12.07□□□□□ -0.48
HMGN1-216ENST00000486741 NRIP3Q9NQ35 241 aa12.07□□□□□ -0.48
HMGN1-216ENST00000486741 LILRA5A6NI73 299 aa12.07□□□□□ -0.48
HMGN1-216ENST00000486741 A8MVM7 634 aa12.07□□□□□ -0.48
HMGN1-216ENST00000486741 ZNF208O43345 1280 aa12.07□□□□□ -0.48
HMGN1-216ENST00000486741 LALBAP00709 142 aa12.07□□□□□ -0.48
HMGN1-216ENST00000486741 ZGLP1P0C6A0 271 aa12.07□□□□□ -0.48
HMGN1-216ENST00000486741 HOXD11P31277 338 aaPredicted RBP12.07□□□□□ -0.48
HMGN1-216ENST00000486741 FOLR3P41439 243 aa12.07□□□□□ -0.48
HMGN1-216ENST00000486741 DIO1P49895 249 aa12.07□□□□□ -0.48
HMGN1-216ENST00000486741 CD226Q15762 336 aa12.07□□□□□ -0.48
HMGN1-216ENST00000486741 AADACL4Q5VUY2 407 aa12.07□□□□□ -0.48
HMGN1-216ENST00000486741 FAM205BPQ63HN1 556 aa12.07□□□□□ -0.48
HMGN1-216ENST00000486741 ZNF770Q6IQ21 691 aaPredicted RBP12.07□□□□□ -0.48
HMGN1-216ENST00000486741 LRRC18Q8N456 261 aa12.07□□□□□ -0.48
HMGN1-216ENST00000486741 C3orf49Q96BT1 292 aa12.07□□□□□ -0.48
HMGN1-216ENST00000486741 SEMA4CQ9C0C4 833 aa12.07□□□□□ -0.48
HMGN1-216ENST00000486741 VN1R1Q9GZP7 353 aa12.07□□□□□ -0.48
HMGN1-216ENST00000486741 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.07□□□□□ -0.48
HMGN1-216ENST00000486741 UPB1Q9UBR1 384 aa12.07□□□□□ -0.48
HMGN1-216ENST00000486741 PCDHGB2Q9Y5G2 931 aa12.07□□□□□ -0.48
HMGN1-216ENST00000486741 ALG5Q9Y673 324 aa12.07□□□□□ -0.48
HMGN1-216ENST00000486741 A0A1B0GTH9 108 aa12.06□□□□□ -0.48
HMGN1-216ENST00000486741 SRMP19623 302 aa12.06□□□□□ -0.48
HMGN1-216ENST00000486741 POU3F4P49335 361 aa12.06□□□□□ -0.48
HMGN1-216ENST00000486741 MFSD13AQ14CX5 517 aa12.06□□□□□ -0.48
HMGN1-216ENST00000486741 ATAD3CQ5T2N8 411 aa12.06□□□□□ -0.48
HMGN1-216ENST00000486741 TPRA1Q86W33 373 aa12.06□□□□□ -0.48
HMGN1-216ENST00000486741 IQCF2Q8IXL9 164 aa12.06□□□□□ -0.48
HMGN1-216ENST00000486741 C17orf47Q8NEP4 570 aa12.06□□□□□ -0.48
HMGN1-216ENST00000486741 SFXN2Q96NB2 322 aa12.06□□□□□ -0.48
HMGN1-216ENST00000486741 WDR76Q9H967 626 aa12.06□□□□□ -0.48
HMGN1-216ENST00000486741 LIN7BQ9HAP6 207 aa12.06□□□□□ -0.48
HMGN1-216ENST00000486741 RBFOX1Q9NWB1 397 aaKnown RBP12.06□□□□□ -0.48
HMGN1-216ENST00000486741 HLA-DMAP28067 261 aa12.06□□□□□ -0.48
HMGN1-216ENST00000486741 PRSS3P35030 304 aa12.06□□□□□ -0.48
HMGN1-216ENST00000486741 LTBRP36941 435 aa12.06□□□□□ -0.48
HMGN1-216ENST00000486741 GPR85P60893 370 aa12.06□□□□□ -0.48
HMGN1-216ENST00000486741 FGFBP1Q14512 234 aa12.06□□□□□ -0.48
HMGN1-216ENST00000486741 YOD1Q5VVQ6 348 aaPredicted RBP12.06□□□□□ -0.48
HMGN1-216ENST00000486741 TRMT61AQ96FX7 289 aaKnown RBP12.06□□□□□ -0.48
HMGN1-216ENST00000486741 SLC41A2Q96JW4 573 aa12.06□□□□□ -0.48
HMGN1-216ENST00000486741 MOGAT1Q96PD6 335 aa12.06□□□□□ -0.48
HMGN1-216ENST00000486741 CHMP1AQ9HD42 196 aaPredicted RBP12.06□□□□□ -0.48
HMGN1-216ENST00000486741 MEPEQ9NQ76 525 aaPredicted RBP12.06□□□□□ -0.48
HMGN1-216ENST00000486741 KLHL13Q9P2N7 655 aa12.06□□□□□ -0.48
HMGN1-216ENST00000486741 FOXS1O43638 330 aa12.06□□□□□ -0.48
HMGN1-216ENST00000486741 MPIG6BO95866 241 aa12.06□□□□□ -0.48
HMGN1-216ENST00000486741 AMY2AP04746 511 aa12.06□□□□□ -0.48
HMGN1-216ENST00000486741 CSF3P09919 207 aa12.06□□□□□ -0.48
HMGN1-216ENST00000486741 NAT1P18440 290 aa12.06□□□□□ -0.48
HMGN1-216ENST00000486741 DAP3P51398 398 aaKnown RBP12.06□□□□□ -0.48
HMGN1-216ENST00000486741 CCL7P80098 99 aa12.06□□□□□ -0.48
HMGN1-216ENST00000486741 IFITM3Q01628 133 aa12.06□□□□□ -0.48
HMGN1-216ENST00000486741 LTBQ06643 244 aa12.06□□□□□ -0.48
HMGN1-216ENST00000486741 TMPRSS11FQ6ZWK6 438 aa12.06□□□□□ -0.48
HMGN1-216ENST00000486741 ZNF584Q8IVC4 421 aa12.06□□□□□ -0.48
HMGN1-216ENST00000486741 DERL3Q96Q80 235 aa12.06□□□□□ -0.48
HMGN1-216ENST00000486741 KCNG2Q9UJ96 466 aa12.06□□□□□ -0.48
HMGN1-216ENST00000486741 A0A087WUJ7 227 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms