RNA–Protein interactions for RNA: ENST00000486227.5

HDAC6-228, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 4,718 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-228ENST00000486227 GPR176Q14439 515 aa10.13□□□□□ -0.79
HDAC6-228ENST00000486227 EXT1Q16394 746 aa10.13□□□□□ -0.79
HDAC6-228ENST00000486227 TMEM176BQ3YBM2 270 aaPredicted RBP10.13□□□□□ -0.79
HDAC6-228ENST00000486227 ZBTB37Q5TC79 503 aa10.13□□□□□ -0.79
HDAC6-228ENST00000486227 SLC6A19Q695T7 634 aa10.13□□□□□ -0.79
HDAC6-228ENST00000486227 OR7E24Q6IFN5 339 aa10.13□□□□□ -0.79
HDAC6-228ENST00000486227 OR1J4Q8NGS1 313 aa10.13□□□□□ -0.79
HDAC6-228ENST00000486227 ALG12Q9BV10 488 aa10.13□□□□□ -0.79
HDAC6-228ENST00000486227 GGT3PA6NGU5 568 aa10.13□□□□□ -0.79
HDAC6-228ENST00000486227 ZAR1LA6NP61 321 aa10.13□□□□□ -0.79
HDAC6-228ENST00000486227 F5H5K5 113 aa10.13□□□□□ -0.79
HDAC6-228ENST00000486227 M0R296 226 aa10.13□□□□□ -0.79
HDAC6-228ENST00000486227 RAB3AP20336 220 aa10.13□□□□□ -0.79
HDAC6-228ENST00000486227 GRK5P34947 590 aa10.13□□□□□ -0.79
HDAC6-228ENST00000486227 POU3F4P49335 361 aa10.13□□□□□ -0.79
HDAC6-228ENST00000486227 ACTBP60709 375 aa10.13□□□□□ -0.79
HDAC6-228ENST00000486227 ACTG1P63261 375 aa10.13□□□□□ -0.79
HDAC6-228ENST00000486227 SPEM2Q0P670 501 aa10.13□□□□□ -0.79
HDAC6-228ENST00000486227 ELAVL1Q15717 326 aaKnown RBP10.13□□□□□ -0.79
HDAC6-228ENST00000486227 ZMAT1Q5H9K5 638 aa10.13□□□□□ -0.79
HDAC6-228ENST00000486227 BPHLQ86WA6 291 aaPredicted RBP10.13□□□□□ -0.79
HDAC6-228ENST00000486227 RDH10Q8IZV5 341 aa10.13□□□□□ -0.79
HDAC6-228ENST00000486227 ZNF454Q8N9F8 522 aa10.13□□□□□ -0.79
HDAC6-228ENST00000486227 ST8SIA4Q92187 359 aa10.13□□□□□ -0.79
HDAC6-228ENST00000486227 TSLPQ969D9 159 aa10.13□□□□□ -0.79
HDAC6-228ENST00000486227 ST6GAL2Q96JF0 529 aa10.13□□□□□ -0.79
HDAC6-228ENST00000486227 UQCC2Q9BRT2 126 aa10.13□□□□□ -0.79
HDAC6-228ENST00000486227 LRRC61Q9BV99 259 aa10.13□□□□□ -0.79
HDAC6-228ENST00000486227 METTL8Q9H825 291 aaKnown RBP10.13□□□□□ -0.79
HDAC6-228ENST00000486227 SYNPO2LQ9H987 977 aa10.13□□□□□ -0.79
HDAC6-228ENST00000486227 FBXL3Q9UKT7 428 aa10.13□□□□□ -0.79
HDAC6-228ENST00000486227 RCE1Q9Y256 329 aa10.13□□□□□ -0.79
HDAC6-228ENST00000486227 MRPS2Q9Y399 296 aaKnown RBP10.13□□□□□ -0.79
HDAC6-228ENST00000486227 RBBP6Q7Z6E9 1792 aaKnown RBP10.13□□□□□ -0.79
HDAC6-228ENST00000486227 GREM1O60565 184 aa10.13□□□□□ -0.79
HDAC6-228ENST00000486227 HOXB3P14651 431 aaPredicted RBP10.13□□□□□ -0.79
HDAC6-228ENST00000486227 SDHBP21912 280 aa10.13□□□□□ -0.79
HDAC6-228ENST00000486227 KIR2DL3P43628 341 aa10.13□□□□□ -0.79
HDAC6-228ENST00000486227 SIGLEC14Q08ET2 396 aa10.13□□□□□ -0.79
HDAC6-228ENST00000486227 GSG1LQ6UXU4 331 aa10.13□□□□□ -0.79
HDAC6-228ENST00000486227 WDFY2Q96P53 400 aa10.13□□□□□ -0.79
HDAC6-228ENST00000486227 URM1Q9BTM9 101 aaKnown RBP10.13□□□□□ -0.79
HDAC6-228ENST00000486227 SYT4Q9H2B2 425 aa10.13□□□□□ -0.79
HDAC6-228ENST00000486227 COPS3Q9UNS2 423 aa10.13□□□□□ -0.79
HDAC6-228ENST00000486227 LOXL2Q9Y4K0 774 aa10.13□□□□□ -0.79
HDAC6-228ENST00000486227 K7EQS6 105 aa10.12□□□□□ -0.79
HDAC6-228ENST00000486227 WDPCPO95876 746 aa10.12□□□□□ -0.79
HDAC6-228ENST00000486227 SYT14P1Q58G82 188 aa10.12□□□□□ -0.79
HDAC6-228ENST00000486227 SLC35D2Q76EJ3 337 aa10.12□□□□□ -0.79
HDAC6-228ENST00000486227 CAMKMTQ7Z624 323 aa10.12□□□□□ -0.79
HDAC6-228ENST00000486227 FOXRED2Q8IWF2 684 aa10.12□□□□□ -0.79
HDAC6-228ENST00000486227 ZNF511Q8NB15 262 aa10.12□□□□□ -0.79
HDAC6-228ENST00000486227 BORCS8Q96FH0 119 aa10.12□□□□□ -0.79
HDAC6-228ENST00000486227 ASF1BQ9NVP2 202 aa10.12□□□□□ -0.79
HDAC6-228ENST00000486227 POMT2Q9UKY4 750 aa10.12□□□□□ -0.79
HDAC6-228ENST00000486227 WASF3Q9UPY6 502 aa10.12□□□□□ -0.79
HDAC6-228ENST00000486227 R4GN57 208 aa10.12□□□□□ -0.79
HDAC6-228ENST00000486227 TMED7-TICAM2A0A0A6YYA0 188 aa10.12□□□□□ -0.79
HDAC6-228ENST00000486227 THBS1P07996 1170 aa10.12□□□□□ -0.79
HDAC6-228ENST00000486227 UBBP0CG47 229 aa10.12□□□□□ -0.79
HDAC6-228ENST00000486227 UBCP0CG48 685 aaKnown RBP10.12□□□□□ -0.79
HDAC6-228ENST00000486227 PTH2RP49190 550 aa10.12□□□□□ -0.79
HDAC6-228ENST00000486227 RPS27AP62979 156 aaKnown RBP10.12□□□□□ -0.79
HDAC6-228ENST00000486227 UBA52P62987 128 aaKnown RBP10.12□□□□□ -0.79
HDAC6-228ENST00000486227 MTFR2Q6P444 385 aa10.12□□□□□ -0.79
HDAC6-228ENST00000486227 TMEM205Q6UW68 189 aa10.12□□□□□ -0.79
HDAC6-228ENST00000486227 RPS19BP1Q86WX3 136 aaKnown RBP10.12□□□□□ -0.79
HDAC6-228ENST00000486227 SVBPQ8N300 66 aa10.12□□□□□ -0.79
HDAC6-228ENST00000486227 ZNF611Q8N823 705 aa10.12□□□□□ -0.79
HDAC6-228ENST00000486227 ELP5Q8TE02 316 aa10.12□□□□□ -0.79
HDAC6-228ENST00000486227 NINJ1Q92982 152 aa10.12□□□□□ -0.79
HDAC6-228ENST00000486227 ZNF775Q96BV0 537 aaPredicted RBP10.12□□□□□ -0.79
HDAC6-228ENST00000486227 C7orf34Q96L11 122 aa10.12□□□□□ -0.79
HDAC6-228ENST00000486227 ELOVL3Q9HB03 270 aa10.12□□□□□ -0.79
HDAC6-228ENST00000486227 ACOXLQ9NUZ1 547 aa10.12□□□□□ -0.79
HDAC6-228ENST00000486227 SDHAF2Q9NX18 166 aa10.12□□□□□ -0.79
HDAC6-228ENST00000486227 TMED7Q9Y3B3 224 aa10.12□□□□□ -0.79
HDAC6-228ENST00000486227 KCNE3Q9Y6H6 103 aa10.12□□□□□ -0.79
HDAC6-228ENST00000486227 TEX13DA0A0J9YY54 714 aaPredicted RBP10.12□□□□□ -0.79
HDAC6-228ENST00000486227 CTSVO60911 334 aa10.12□□□□□ -0.79
HDAC6-228ENST00000486227 SCO1O75880 301 aa10.12□□□□□ -0.79
HDAC6-228ENST00000486227 POU2F2P09086 479 aa10.12□□□□□ -0.79
HDAC6-228ENST00000486227 PET100P0DJ07 73 aa10.12□□□□□ -0.79
HDAC6-228ENST00000486227 CD79AP11912 226 aa10.12□□□□□ -0.79
HDAC6-228ENST00000486227 MAKP20794 623 aa10.12□□□□□ -0.79
HDAC6-228ENST00000486227 HTR1FP30939 366 aa10.12□□□□□ -0.79
HDAC6-228ENST00000486227 CYB561P49447 251 aa10.12□□□□□ -0.79
HDAC6-228ENST00000486227 POLR2HP52434 150 aaKnown RBP10.12□□□□□ -0.79
HDAC6-228ENST00000486227 CEBPGP53567 150 aa10.12□□□□□ -0.79
HDAC6-228ENST00000486227 FOXC1Q12948 553 aa10.12□□□□□ -0.79
HDAC6-228ENST00000486227 LSMEM1Q8N8F7 131 aa10.12□□□□□ -0.79
HDAC6-228ENST00000486227 C16orf52Q8NHV5 167 aa10.12□□□□□ -0.79
HDAC6-228ENST00000486227 ZNF417Q8TAU3 575 aa10.12□□□□□ -0.79
HDAC6-228ENST00000486227 HOXB13Q92826 284 aaPredicted RBP10.12□□□□□ -0.79
HDAC6-228ENST00000486227 Q96M85 177 aa10.12□□□□□ -0.79
HDAC6-228ENST00000486227 ZNF701Q9NV72 531 aaPredicted RBP10.12□□□□□ -0.79
HDAC6-228ENST00000486227 MEGF11A6BM72 1044 aa10.12□□□□□ -0.79
HDAC6-228ENST00000486227 TNFSF15O95150 251 aa10.12□□□□□ -0.79
HDAC6-228ENST00000486227 CPEP16870 476 aa10.12□□□□□ -0.79
HDAC6-228ENST00000486227 C17orf67Q0P5P2 114 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms