RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 PAMR1Q6UXH9 720 aa5.01□□□□□ -1.61
CUX1-208ENST00000485792 PXKQ7Z7A4 578 aa5.01□□□□□ -1.61
CUX1-208ENST00000485792 VTCN1Q7Z7D3 282 aa5.01□□□□□ -1.61
CUX1-208ENST00000485792 CPLX4Q7Z7G2 160 aa5.01□□□□□ -1.61
CUX1-208ENST00000485792 CARM1Q86X55 608 aa5.01□□□□□ -1.61
CUX1-208ENST00000485792 NKAIN4Q8IVV8 208 aa5.01□□□□□ -1.61
CUX1-208ENST00000485792 PGAM4Q8N0Y7 254 aa5.01□□□□□ -1.61
CUX1-208ENST00000485792 KDM8Q8N371 416 aa5.01□□□□□ -1.61
CUX1-208ENST00000485792 C17orf78Q8N4C9 275 aa5.01□□□□□ -1.61
CUX1-208ENST00000485792 LRRC17Q8N6Y2 441 aa5.01□□□□□ -1.61
CUX1-208ENST00000485792 FAM169BQ8N8A8 192 aa5.01□□□□□ -1.61
CUX1-208ENST00000485792 POMGNT2Q8NAT1 580 aa5.01□□□□□ -1.61
CUX1-208ENST00000485792 PFN4Q8NHR9 129 aa5.01□□□□□ -1.61
CUX1-208ENST00000485792 HTRA1Q92743 480 aa5.01□□□□□ -1.61
CUX1-208ENST00000485792 S100PBPQ96BU1 408 aa5.01□□□□□ -1.61
CUX1-208ENST00000485792 NMD3Q96D46 503 aaKnown RBP5.01□□□□□ -1.61
CUX1-208ENST00000485792 ZNF75AQ96N20 296 aa5.01□□□□□ -1.61
CUX1-208ENST00000485792 LRRC37BQ96QE4 947 aa5.01□□□□□ -1.61
CUX1-208ENST00000485792 PIP5K1AQ99755 562 aa5.01□□□□□ -1.61
CUX1-208ENST00000485792 POLDIP3Q9BY77 421 aaKnown RBP5.01□□□□□ -1.61
CUX1-208ENST00000485792 MRPL13Q9BYD1 178 aaKnown RBP5.01□□□□□ -1.61
CUX1-208ENST00000485792 ACTR6Q9GZN1 396 aa5.01□□□□□ -1.61
CUX1-208ENST00000485792 C1orf21Q9H246 121 aa5.01□□□□□ -1.61
CUX1-208ENST00000485792 ANKRD19PQ9H560 264 aa5.01□□□□□ -1.61
CUX1-208ENST00000485792 FKRPQ9H9S5 495 aa5.01□□□□□ -1.61
CUX1-208ENST00000485792 C20orf141Q9NUB4 165 aa5.01□□□□□ -1.61
CUX1-208ENST00000485792 DCAF13Q9NV06 445 aaKnown RBP5.01□□□□□ -1.61
CUX1-208ENST00000485792 ASB6Q9NWX5 421 aa5.01□□□□□ -1.61
CUX1-208ENST00000485792 VNN3Q9NY84 501 aa5.01□□□□□ -1.61
CUX1-208ENST00000485792 ZNF226Q9NYT6 803 aa5.01□□□□□ -1.61
CUX1-208ENST00000485792 TAS2R16Q9NYV7 291 aa5.01□□□□□ -1.61
CUX1-208ENST00000485792 ZNF224Q9NZL3 707 aa5.01□□□□□ -1.61
CUX1-208ENST00000485792 C6orf203Q9P0P8 240 aaPredicted RBP5.01□□□□□ -1.61
CUX1-208ENST00000485792 RIMS3Q9UJD0 308 aa5.01□□□□□ -1.61
CUX1-208ENST00000485792 NOSIPQ9Y314 301 aaKnown RBP5.01□□□□□ -1.61
CUX1-208ENST00000485792 SLC25A15Q9Y619 301 aa5.01□□□□□ -1.61
CUX1-208ENST00000485792 C2CD3Q4AC94 2353 aa5.01□□□□□ -1.61
CUX1-208ENST00000485792 DYSFO75923 2080 aa5.01□□□□□ -1.61
CUX1-208ENST00000485792 ARPC4-TTLL3A0A0A6YYG9 625 aa5□□□□□ -1.61
CUX1-208ENST00000485792 IGKV1D-43A0A0B4J1Z2 117 aa5□□□□□ -1.61
CUX1-208ENST00000485792 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5□□□□□ -1.61
CUX1-208ENST00000485792 A0A1W2PR80 420 aa5□□□□□ -1.61
CUX1-208ENST00000485792 DPRXA6NFQ7 191 aa5□□□□□ -1.61
CUX1-208ENST00000485792 SLC22A31A6NKX4 558 aa5□□□□□ -1.61
CUX1-208ENST00000485792 CENPBD1B2RD01 187 aa5□□□□□ -1.61
CUX1-208ENST00000485792 OVOL3O00110 214 aa5□□□□□ -1.61
CUX1-208ENST00000485792 CXCR6O00574 342 aa5□□□□□ -1.61
CUX1-208ENST00000485792 IMPA2O14732 288 aa5□□□□□ -1.61
CUX1-208ENST00000485792 DCTN3O75935 186 aa5□□□□□ -1.61
CUX1-208ENST00000485792 AHSA1O95433 338 aa5□□□□□ -1.61
CUX1-208ENST00000485792 IFNA14P01570 189 aa5□□□□□ -1.61
CUX1-208ENST00000485792 IGKV3-15P01624 115 aa5□□□□□ -1.61
CUX1-208ENST00000485792 IGLV1-44P01699 117 aa5□□□□□ -1.61
CUX1-208ENST00000485792 MT-ND1P03886 318 aa5□□□□□ -1.61
CUX1-208ENST00000485792 IGFBP1P08833 259 aaPredicted RBP5□□□□□ -1.61
CUX1-208ENST00000485792 DANCRP0C864 163 aa5□□□□□ -1.61
CUX1-208ENST00000485792 ATF4P18848 351 aaPredicted RBP5□□□□□ -1.61
CUX1-208ENST00000485792 ATP6V1B2P21281 511 aa5□□□□□ -1.61
CUX1-208ENST00000485792 PAX7P23759 505 aa5□□□□□ -1.61
CUX1-208ENST00000485792 MPGP29372 298 aa5□□□□□ -1.61
CUX1-208ENST00000485792 HOXC12P31275 282 aa5□□□□□ -1.61
CUX1-208ENST00000485792 OR1E2P47887 323 aa5□□□□□ -1.61
CUX1-208ENST00000485792 SELENOPP49908 381 aa5□□□□□ -1.61
CUX1-208ENST00000485792 HMGA2P52926 109 aa5□□□□□ -1.61
CUX1-208ENST00000485792 IST1P53990 364 aa5□□□□□ -1.61
CUX1-208ENST00000485792 RUNX1T1Q06455 604 aa5□□□□□ -1.61
CUX1-208ENST00000485792 PIN1Q13526 163 aaPredicted RBP5□□□□□ -1.61
CUX1-208ENST00000485792 BEX5Q5H9J7 111 aa5□□□□□ -1.61
CUX1-208ENST00000485792 TMEM225Q6GV28 225 aa5□□□□□ -1.61
CUX1-208ENST00000485792 OR7E24Q6IFN5 339 aa5□□□□□ -1.61
CUX1-208ENST00000485792 BHLHA15Q7RTS1 189 aaPredicted RBP5□□□□□ -1.61
CUX1-208ENST00000485792 PIWIL3Q7Z3Z3 882 aaKnown RBP5□□□□□ -1.61
CUX1-208ENST00000485792 CDH24Q86UP0 819 aa5□□□□□ -1.61
CUX1-208ENST00000485792 C20orf196Q8IYI0 205 aa5□□□□□ -1.61
CUX1-208ENST00000485792 RNF113BQ8IZP6 322 aaKnown RBP5□□□□□ -1.61
CUX1-208ENST00000485792 OFCC1Q8IZS5 231 aa5□□□□□ -1.61
CUX1-208ENST00000485792 ZNF611Q8N823 705 aa5□□□□□ -1.61
CUX1-208ENST00000485792 LRRC75AQ8NAA5 344 aa5□□□□□ -1.61
CUX1-208ENST00000485792 PIK3C3Q8NEB9 887 aa5□□□□□ -1.61
CUX1-208ENST00000485792 OR5J2Q8NH18 312 aa5□□□□□ -1.61
CUX1-208ENST00000485792 BCL2L2Q92843 193 aaPredicted RBP5□□□□□ -1.61
CUX1-208ENST00000485792 KISS1RQ969F8 398 aaPredicted RBP5□□□□□ -1.61
CUX1-208ENST00000485792 APH1AQ96BI3 265 aa5□□□□□ -1.61
CUX1-208ENST00000485792 PRRC1Q96M27 445 aa5□□□□□ -1.61
CUX1-208ENST00000485792 HS6ST2Q96MM7 605 aa5□□□□□ -1.61
CUX1-208ENST00000485792 ALPK1Q96QP1 1244 aa5□□□□□ -1.61
CUX1-208ENST00000485792 OR2M2Q96R28 347 aa5□□□□□ -1.61
CUX1-208ENST00000485792 EPYCQ99645 322 aa5□□□□□ -1.61
CUX1-208ENST00000485792 GPA33Q99795 319 aa5□□□□□ -1.61
CUX1-208ENST00000485792 MED18Q9BUE0 208 aa5□□□□□ -1.61
CUX1-208ENST00000485792 TAPBPLQ9BX59 468 aa5□□□□□ -1.61
CUX1-208ENST00000485792 KLHL4Q9C0H6 718 aa5□□□□□ -1.61
CUX1-208ENST00000485792 FAM107BQ9H098 131 aa5□□□□□ -1.61
CUX1-208ENST00000485792 NSRP1Q9H0G5 558 aaKnown RBP5□□□□□ -1.61
CUX1-208ENST00000485792 SLCO5A1Q9H2Y9 848 aa5□□□□□ -1.61
CUX1-208ENST00000485792 SPAG4Q9NPE6 437 aa5□□□□□ -1.61
CUX1-208ENST00000485792 OBP2BQ9NPH6 170 aa5□□□□□ -1.61
CUX1-208ENST00000485792 SLC17A5Q9NRA2 495 aa5□□□□□ -1.61
CUX1-208ENST00000485792 ZNF701Q9NV72 531 aaPredicted RBP5□□□□□ -1.61
CUX1-208ENST00000485792 ADPRHL2Q9NX46 363 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms