RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 LIPHQ8WWY8 451 aa10.46□□□□□ -0.73
APTX-227ENST00000485479 RASD2Q96D21 266 aa10.46□□□□□ -0.73
APTX-227ENST00000485479 WFIKKN1Q96NZ8 548 aa10.46□□□□□ -0.73
APTX-227ENST00000485479 TSPAN32Q96QS1 320 aa10.46□□□□□ -0.73
APTX-227ENST00000485479 PLA2G12AQ9BZM1 189 aa10.46□□□□□ -0.73
APTX-227ENST00000485479 ACTR6Q9GZN1 396 aa10.46□□□□□ -0.73
APTX-227ENST00000485479 CRLF2Q9HC73 371 aa10.46□□□□□ -0.73
APTX-227ENST00000485479 PDP1Q9P0J1 537 aaPredicted RBP10.46□□□□□ -0.73
APTX-227ENST00000485479 MALT1Q9UDY8 824 aa10.46□□□□□ -0.73
APTX-227ENST00000485479 NOX1Q9Y5S8 564 aa10.46□□□□□ -0.73
APTX-227ENST00000485479 FLNBO75369 2602 aaKnown RBP10.46□□□□□ -0.73
APTX-227ENST00000485479 TACC2O95359 2948 aa10.46□□□□□ -0.74
APTX-227ENST00000485479 A0A096LPE4 126 aa10.46□□□□□ -0.74
APTX-227ENST00000485479 A0A1W2PPZ6 126 aa10.46□□□□□ -0.74
APTX-227ENST00000485479 TUBAL3A6NHL2 446 aa10.46□□□□□ -0.74
APTX-227ENST00000485479 BCL10O95999 233 aa10.46□□□□□ -0.74
APTX-227ENST00000485479 TSPAN19P0C672 248 aa10.46□□□□□ -0.74
APTX-227ENST00000485479 PRF1P14222 555 aa10.46□□□□□ -0.74
APTX-227ENST00000485479 IGFBP2P18065 325 aa10.46□□□□□ -0.74
APTX-227ENST00000485479 HMGA2P52926 109 aa10.46□□□□□ -0.74
APTX-227ENST00000485479 TUBA1BP68363 451 aa10.46□□□□□ -0.74
APTX-227ENST00000485479 TUBA4AP68366 448 aa10.46□□□□□ -0.74
APTX-227ENST00000485479 FMODQ06828 376 aa10.46□□□□□ -0.74
APTX-227ENST00000485479 MICAQ29983 383 aa10.46□□□□□ -0.74
APTX-227ENST00000485479 OTPQ5XKR4 325 aa10.46□□□□□ -0.74
APTX-227ENST00000485479 TUBA1AQ71U36 451 aa10.46□□□□□ -0.74
APTX-227ENST00000485479 FEVQ99581 238 aa10.46□□□□□ -0.74
APTX-227ENST00000485479 MED18Q9BUE0 208 aa10.46□□□□□ -0.74
APTX-227ENST00000485479 POLDIP3Q9BY77 421 aaKnown RBP10.46□□□□□ -0.74
APTX-227ENST00000485479 OR52D1Q9H346 318 aa10.46□□□□□ -0.74
APTX-227ENST00000485479 ZNF346Q9UL40 294 aaKnown RBP10.46□□□□□ -0.74
APTX-227ENST00000485479 ANKHD1Q8IWZ3 2542 aaKnown RBP10.45□□□□□ -0.74
APTX-227ENST00000485479 IGKV1D-43A0A0B4J1Z2 117 aa10.45□□□□□ -0.74
APTX-227ENST00000485479 A0A1W2PRG6 482 aa10.45□□□□□ -0.74
APTX-227ENST00000485479 C16orf97H3BN30 126 aa10.45□□□□□ -0.74
APTX-227ENST00000485479 H3BNX3 289 aa10.45□□□□□ -0.74
APTX-227ENST00000485479 SLC2A10O95528 541 aa10.45□□□□□ -0.74
APTX-227ENST00000485479 PPP1R3DO95685 299 aa10.45□□□□□ -0.74
APTX-227ENST00000485479 IGF2P01344 180 aa10.45□□□□□ -0.74
APTX-227ENST00000485479 ROR2Q01974 943 aaKnown RBP10.45□□□□□ -0.74
APTX-227ENST00000485479 ZP4Q12836 540 aa10.45□□□□□ -0.74
APTX-227ENST00000485479 HIKESHIQ53FT3 197 aa10.45□□□□□ -0.74
APTX-227ENST00000485479 SFRP5Q5T4F7 317 aa10.45□□□□□ -0.74
APTX-227ENST00000485479 C1orf94Q6P1W5 598 aa10.45□□□□□ -0.74
APTX-227ENST00000485479 SMARCD3Q6STE5 483 aa10.45□□□□□ -0.74
APTX-227ENST00000485479 DMRTC2Q8IXT2 367 aaPredicted RBP10.45□□□□□ -0.74
APTX-227ENST00000485479 OR6N1Q8NGY5 312 aa10.45□□□□□ -0.74
APTX-227ENST00000485479 OR52N5Q8NH56 324 aa10.45□□□□□ -0.74
APTX-227ENST00000485479 ASB10Q8WXI3 467 aa10.45□□□□□ -0.74
APTX-227ENST00000485479 KISS1RQ969F8 398 aaPredicted RBP10.45□□□□□ -0.74
APTX-227ENST00000485479 SAMD8Q96LT4 415 aa10.45□□□□□ -0.74
APTX-227ENST00000485479 Q96M85 177 aa10.45□□□□□ -0.74
APTX-227ENST00000485479 FOXN4Q96NZ1 517 aa10.45□□□□□ -0.74
APTX-227ENST00000485479 RAB3IPQ96QF0 476 aaPredicted RBP10.45□□□□□ -0.74
APTX-227ENST00000485479 TACO1Q9BSH4 297 aaKnown RBP10.45□□□□□ -0.74
APTX-227ENST00000485479 C1QTNF6Q9BXI9 259 aa10.45□□□□□ -0.74
APTX-227ENST00000485479 PARPBPQ9NWS1 579 aa10.45□□□□□ -0.74
APTX-227ENST00000485479 DNAJB9Q9UBS3 223 aa10.45□□□□□ -0.74
APTX-227ENST00000485479 TMEM5Q9Y2B1 443 aa10.45□□□□□ -0.74
APTX-227ENST00000485479 LOC102725191A0A1B0GVB3 256 aa10.45□□□□□ -0.74
APTX-227ENST00000485479 CIB4A0PJX0 185 aa10.45□□□□□ -0.74
APTX-227ENST00000485479 SH3D21A4FU49 640 aa10.45□□□□□ -0.74
APTX-227ENST00000485479 ZNF726A6NNF4 738 aa10.45□□□□□ -0.74
APTX-227ENST00000485479 PTP4A3O75365 173 aa10.45□□□□□ -0.74
APTX-227ENST00000485479 SLC43A1O75387 559 aa10.45□□□□□ -0.74
APTX-227ENST00000485479 COX6B1P14854 86 aa10.45□□□□□ -0.74
APTX-227ENST00000485479 IL32P24001 234 aa10.45□□□□□ -0.74
APTX-227ENST00000485479 FPR3P25089 353 aa10.45□□□□□ -0.74
APTX-227ENST00000485479 KIR2DL3P43628 341 aa10.45□□□□□ -0.74
APTX-227ENST00000485479 GSSP48637 474 aa10.45□□□□□ -0.74
APTX-227ENST00000485479 ITGADQ13349 1161 aa10.45□□□□□ -0.74
APTX-227ENST00000485479 CEACAM16Q2WEN9 425 aa10.45□□□□□ -0.74
APTX-227ENST00000485479 BHLHA15Q7RTS1 189 aaPredicted RBP10.45□□□□□ -0.74
APTX-227ENST00000485479 GPR137CQ8N3F9 429 aa10.45□□□□□ -0.74
APTX-227ENST00000485479 ZNF433Q8N7K0 673 aaPredicted RBP10.45□□□□□ -0.74
APTX-227ENST00000485479 ICA1LQ8NDH6 482 aa10.45□□□□□ -0.74
APTX-227ENST00000485479 OR8D4Q8NGM9 314 aa10.45□□□□□ -0.74
APTX-227ENST00000485479 GIPC3Q8TF64 312 aa10.45□□□□□ -0.74
APTX-227ENST00000485479 HDAC2Q92769 488 aaKnown RBP10.45□□□□□ -0.74
APTX-227ENST00000485479 PKP2Q99959 881 aa10.45□□□□□ -0.74
APTX-227ENST00000485479 KRCC1Q9NPI7 259 aaPredicted RBP10.45□□□□□ -0.74
APTX-227ENST00000485479 FANCFQ9NPI8 374 aa10.45□□□□□ -0.74
APTX-227ENST00000485479 FOXD3Q9UJU5 478 aaPredicted RBP10.45□□□□□ -0.74
APTX-227ENST00000485479 IER3IP1Q9Y5U9 82 aa10.45□□□□□ -0.74
APTX-227ENST00000485479 TEX13CA0A0J9YWL9 993 aa10.44□□□□□ -0.74
APTX-227ENST00000485479 SAC3D1A6NKF1 404 aa10.44□□□□□ -0.74
APTX-227ENST00000485479 ZNF587BE7ETH6 402 aa10.44□□□□□ -0.74
APTX-227ENST00000485479 PDLIM1O00151 329 aa10.44□□□□□ -0.74
APTX-227ENST00000485479 SOCS2O14508 198 aa10.44□□□□□ -0.74
APTX-227ENST00000485479 TRMUO75648 421 aaKnown RBP10.44□□□□□ -0.74
APTX-227ENST00000485479 THBDP07204 575 aa10.44□□□□□ -0.74
APTX-227ENST00000485479 PGA4P0DJD7 388 aa10.44□□□□□ -0.74
APTX-227ENST00000485479 PGA3P0DJD8 388 aa10.44□□□□□ -0.74
APTX-227ENST00000485479 ZNF23P17027 643 aa10.44□□□□□ -0.74
APTX-227ENST00000485479 COX5AP20674 150 aa10.44□□□□□ -0.74
APTX-227ENST00000485479 ACVR1BP36896 505 aa10.44□□□□□ -0.74
APTX-227ENST00000485479 CD47Q08722 323 aa10.44□□□□□ -0.74
APTX-227ENST00000485479 TAB1Q15750 504 aa10.44□□□□□ -0.74
APTX-227ENST00000485479 ATP6AP1Q15904 470 aa10.44□□□□□ -0.74
APTX-227ENST00000485479 MESTQ5EB52 335 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms