RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 PPP2R2BQ00005 443 aa5.4□□□□□ -1.54
PTCD3-215ENST00000484203 LTBQ06643 244 aa5.4□□□□□ -1.54
PTCD3-215ENST00000484203 SCARB2Q14108 478 aa5.4□□□□□ -1.54
PTCD3-215ENST00000484203 MAPK11Q15759 364 aa5.4□□□□□ -1.54
PTCD3-215ENST00000484203 GABRA6Q16445 453 aa5.4□□□□□ -1.54
PTCD3-215ENST00000484203 CYP51A1Q16850 503 aa5.4□□□□□ -1.54
PTCD3-215ENST00000484203 C21orf62-AS1Q17RA5 79 aa5.4□□□□□ -1.54
PTCD3-215ENST00000484203 HSP90B2PQ58FF3 399 aa5.4□□□□□ -1.54
PTCD3-215ENST00000484203 ALG10BQ5I7T1 473 aa5.4□□□□□ -1.54
PTCD3-215ENST00000484203 HMBOX1Q6NT76 420 aa5.4□□□□□ -1.54
PTCD3-215ENST00000484203 ANKRD16Q6P6B7 361 aa5.4□□□□□ -1.54
PTCD3-215ENST00000484203 ZNF613Q6PF04 617 aa5.4□□□□□ -1.54
PTCD3-215ENST00000484203 LCNL1Q6ZST4 164 aa5.4□□□□□ -1.54
PTCD3-215ENST00000484203 CREB3L2Q70SY1 520 aa5.4□□□□□ -1.54
PTCD3-215ENST00000484203 HMGN2P46Q86SG4 172 aa5.4□□□□□ -1.54
PTCD3-215ENST00000484203 SERPINA11Q86U17 422 aa5.4□□□□□ -1.54
PTCD3-215ENST00000484203 FUNDC1Q8IVP5 155 aa5.4□□□□□ -1.54
PTCD3-215ENST00000484203 TMEM99Q8N816 258 aa5.4□□□□□ -1.54
PTCD3-215ENST00000484203 SCAIQ8N9R8 606 aa5.4□□□□□ -1.54
PTCD3-215ENST00000484203 PIK3C3Q8NEB9 887 aa5.4□□□□□ -1.54
PTCD3-215ENST00000484203 MPP4Q96JB8 637 aa5.4□□□□□ -1.54
PTCD3-215ENST00000484203 LRR1Q96L50 414 aa5.4□□□□□ -1.54
PTCD3-215ENST00000484203 OXGR1Q96P68 337 aa5.4□□□□□ -1.54
PTCD3-215ENST00000484203 RHNO1Q9BSD3 238 aa5.4□□□□□ -1.54
PTCD3-215ENST00000484203 TMEM43Q9BTV4 400 aa5.4□□□□□ -1.54
PTCD3-215ENST00000484203 SLC19A3Q9BZV2 496 aa5.4□□□□□ -1.54
PTCD3-215ENST00000484203 B3GAT2Q9NPZ5 323 aa5.4□□□□□ -1.54
PTCD3-215ENST00000484203 SLC17A5Q9NRA2 495 aa5.4□□□□□ -1.54
PTCD3-215ENST00000484203 SLC7A10Q9NS82 523 aa5.4□□□□□ -1.54
PTCD3-215ENST00000484203 CBLN4Q9NTU7 201 aa5.4□□□□□ -1.54
PTCD3-215ENST00000484203 ADPRHL2Q9NX46 363 aa5.4□□□□□ -1.54
PTCD3-215ENST00000484203 SLC25A37Q9NYZ2 338 aa5.4□□□□□ -1.54
PTCD3-215ENST00000484203 VAPAQ9P0L0 249 aa5.4□□□□□ -1.54
PTCD3-215ENST00000484203 FBXL3Q9UKT7 428 aa5.4□□□□□ -1.54
PTCD3-215ENST00000484203 NOX1Q9Y5S8 564 aa5.4□□□□□ -1.54
PTCD3-215ENST00000484203 STAB1Q9NY15 2570 aa5.39□□□□□ -1.55
PTCD3-215ENST00000484203 A0A087WUJ7 227 aa5.39□□□□□ -1.55
PTCD3-215ENST00000484203 TRBV5-3A0A0A0MS03 114 aa5.39□□□□□ -1.55
PTCD3-215ENST00000484203 ARPC4-TTLL3A0A0A6YYG9 625 aa5.39□□□□□ -1.55
PTCD3-215ENST00000484203 A0A1B0GWA3 101 aa5.39□□□□□ -1.55
PTCD3-215ENST00000484203 SHISA9B4DS77 424 aa5.39□□□□□ -1.55
PTCD3-215ENST00000484203 H7C1Q1 480 aa5.39□□□□□ -1.55
PTCD3-215ENST00000484203 H7C417 338 aa5.39□□□□□ -1.55
PTCD3-215ENST00000484203 ZNF561-AS1K7EIQ3 104 aa5.39□□□□□ -1.55
PTCD3-215ENST00000484203 NDUFAB1O14561 156 aa5.39□□□□□ -1.55
PTCD3-215ENST00000484203 SLC22A2O15244 555 aa5.39□□□□□ -1.55
PTCD3-215ENST00000484203 MGRN1O60291 552 aa5.39□□□□□ -1.55
PTCD3-215ENST00000484203 EDF1O60869 148 aaKnown RBP5.39□□□□□ -1.55
PTCD3-215ENST00000484203 PDE5AO76074 875 aa5.39□□□□□ -1.55
PTCD3-215ENST00000484203 PLAUP00749 431 aa5.39□□□□□ -1.55
PTCD3-215ENST00000484203 IGHV3-9P01782 118 aa5.39□□□□□ -1.55
PTCD3-215ENST00000484203 SOD3P08294 240 aa5.39□□□□□ -1.55
PTCD3-215ENST00000484203 ITGA5P08648 1049 aa5.39□□□□□ -1.55
PTCD3-215ENST00000484203 PRG2P13727 222 aa5.39□□□□□ -1.55
PTCD3-215ENST00000484203 NQO1P15559 274 aaKnown RBP5.39□□□□□ -1.55
PTCD3-215ENST00000484203 H2AFXP16104 143 aaPredicted RBP5.39□□□□□ -1.55
PTCD3-215ENST00000484203 FAHP16930 419 aa5.39□□□□□ -1.55
PTCD3-215ENST00000484203 HOXB9P17482 250 aaPredicted RBP5.39□□□□□ -1.55
PTCD3-215ENST00000484203 APOBEC3AP31941 199 aaPredicted RBP5.39□□□□□ -1.55
PTCD3-215ENST00000484203 TTKP33981 857 aa5.39□□□□□ -1.55
PTCD3-215ENST00000484203 ARR3P36575 388 aa5.39□□□□□ -1.55
PTCD3-215ENST00000484203 FABP6P51161 128 aa5.39□□□□□ -1.55
PTCD3-215ENST00000484203 ZNF83P51522 516 aa5.39□□□□□ -1.55
PTCD3-215ENST00000484203 NFYCQ13952 458 aa5.39□□□□□ -1.55
PTCD3-215ENST00000484203 VEZF1Q14119 521 aa5.39□□□□□ -1.55
PTCD3-215ENST00000484203 RAB35Q15286 201 aa5.39□□□□□ -1.55
PTCD3-215ENST00000484203 TSC22D1Q15714 1073 aa5.39□□□□□ -1.55
PTCD3-215ENST00000484203 CLEC12BQ2HXU8 276 aa5.39□□□□□ -1.55
PTCD3-215ENST00000484203 PGGHGQ32M88 737 aa5.39□□□□□ -1.55
PTCD3-215ENST00000484203 GTDC1Q4AE62 458 aa5.39□□□□□ -1.55
PTCD3-215ENST00000484203 RUNDC3AQ59EK9 446 aa5.39□□□□□ -1.55
PTCD3-215ENST00000484203 TTMPQ5BVD1 217 aa5.39□□□□□ -1.55
PTCD3-215ENST00000484203 TSPO2Q5TGU0 170 aa5.39□□□□□ -1.55
PTCD3-215ENST00000484203 ERICH5Q6P6B1 374 aa5.39□□□□□ -1.55
PTCD3-215ENST00000484203 DLEU7Q6UYE1 221 aa5.39□□□□□ -1.55
PTCD3-215ENST00000484203 HDDC2Q7Z4H3 204 aa5.39□□□□□ -1.55
PTCD3-215ENST00000484203 DPPA2Q7Z7J5 298 aa5.39□□□□□ -1.55
PTCD3-215ENST00000484203 DHDDSQ86SQ9 333 aa5.39□□□□□ -1.55
PTCD3-215ENST00000484203 MUC15Q8N387 334 aa5.39□□□□□ -1.55
PTCD3-215ENST00000484203 GPR137CQ8N3F9 429 aa5.39□□□□□ -1.55
PTCD3-215ENST00000484203 LINC00482Q8N8I6 264 aa5.39□□□□□ -1.55
PTCD3-215ENST00000484203 ZIC4Q8N9L1 334 aa5.39□□□□□ -1.55
PTCD3-215ENST00000484203 LINC01356Q8N9X3 169 aa5.39□□□□□ -1.55
PTCD3-215ENST00000484203 PCYOX1LQ8NBM8 494 aa5.39□□□□□ -1.55
PTCD3-215ENST00000484203 KBTBD8Q8NFY9 601 aa5.39□□□□□ -1.55
PTCD3-215ENST00000484203 OR4F15Q8NGB8 312 aa5.39□□□□□ -1.55
PTCD3-215ENST00000484203 OR8J3Q8NGG0 315 aa5.39□□□□□ -1.55
PTCD3-215ENST00000484203 OR52N5Q8NH56 324 aa5.39□□□□□ -1.55
PTCD3-215ENST00000484203 LILRB1Q8NHL6 650 aaPredicted RBP5.39□□□□□ -1.55
PTCD3-215ENST00000484203 NFKBIDQ8NI38 313 aa5.39□□□□□ -1.55
PTCD3-215ENST00000484203 SLC26A7Q8TE54 656 aa5.39□□□□□ -1.55
PTCD3-215ENST00000484203 MAL2Q969L2 176 aa5.39□□□□□ -1.55
PTCD3-215ENST00000484203 SLC25A36Q96CQ1 311 aa5.39□□□□□ -1.55
PTCD3-215ENST00000484203 ANKRD27Q96NW4 1050 aa5.39□□□□□ -1.55
PTCD3-215ENST00000484203 CGREF1Q99674 301 aa5.39□□□□□ -1.55
PTCD3-215ENST00000484203 EBF4Q9BQW3 602 aa5.39□□□□□ -1.55
PTCD3-215ENST00000484203 TRAF4Q9BUZ4 470 aaPredicted RBP5.39□□□□□ -1.55
PTCD3-215ENST00000484203 KATNB1Q9BVA0 655 aa5.39□□□□□ -1.55
PTCD3-215ENST00000484203 POLR2J2Q9GZM3 115 aaKnown RBP5.39□□□□□ -1.55
PTCD3-215ENST00000484203 POLR2J3Q9H1A7 115 aaKnown RBP5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms