RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 ITGB8P26012 769 aa9.53□□□□□ -0.88
COL12A1-207ENST00000483888 PTPRMP28827 1452 aa9.53□□□□□ -0.88
COL12A1-207ENST00000483888 CHEK1O14757 476 aa9.53□□□□□ -0.88
COL12A1-207ENST00000483888 GPX5O75715 221 aa9.53□□□□□ -0.88
COL12A1-207ENST00000483888 TAS2R60P59551 318 aa9.53□□□□□ -0.88
COL12A1-207ENST00000483888 GHRHRQ02643 423 aa9.53□□□□□ -0.88
COL12A1-207ENST00000483888 ACKR1Q16570 336 aa9.53□□□□□ -0.88
COL12A1-207ENST00000483888 NANOGP1Q8N7R0 232 aa9.53□□□□□ -0.88
COL12A1-207ENST00000483888 GSX1Q9H4S2 264 aaPredicted RBP9.53□□□□□ -0.88
COL12A1-207ENST00000483888 CHST11Q9NPF2 352 aa9.53□□□□□ -0.88
COL12A1-207ENST00000483888 PPP1R14DQ9NXH3 145 aa9.53□□□□□ -0.88
COL12A1-207ENST00000483888 LNP1A1A4G5 178 aa9.53□□□□□ -0.88
COL12A1-207ENST00000483888 LINC00862A6NCI5 91 aa9.53□□□□□ -0.88
COL12A1-207ENST00000483888 STAG3L2P0CL84 134 aa9.53□□□□□ -0.88
COL12A1-207ENST00000483888 AKR1A1P14550 325 aa9.53□□□□□ -0.88
COL12A1-207ENST00000483888 HOXA9P31269 272 aa9.53□□□□□ -0.88
COL12A1-207ENST00000483888 FAAP20Q6NZ36 180 aa9.53□□□□□ -0.88
COL12A1-207ENST00000483888 NHLRC2Q8NBF2 726 aa9.53□□□□□ -0.88
COL12A1-207ENST00000483888 GPX8Q8TED1 209 aa9.53□□□□□ -0.88
COL12A1-207ENST00000483888 DTD2Q96FN9 168 aa9.53□□□□□ -0.88
COL12A1-207ENST00000483888 DOCK9Q9BZ29 2069 aa9.53□□□□□ -0.88
COL12A1-207ENST00000483888 TMEM97Q5BJF2 176 aa9.53□□□□□ -0.88
COL12A1-207ENST00000483888 BCDIN3DQ7Z5W3 292 aaKnown RBP9.53□□□□□ -0.88
COL12A1-207ENST00000483888 PTRH1Q86Y79 214 aaKnown RBP9.53□□□□□ -0.88
COL12A1-207ENST00000483888 ZNF43P17038 809 aa9.52□□□□□ -0.88
COL12A1-207ENST00000483888 CR2P20023 1033 aa9.52□□□□□ -0.88
COL12A1-207ENST00000483888 DUSP1P28562 367 aa9.52□□□□□ -0.88
COL12A1-207ENST00000483888 MLC1Q15049 377 aa9.52□□□□□ -0.88
COL12A1-207ENST00000483888 OR13C8Q8NGS7 320 aa9.52□□□□□ -0.88
COL12A1-207ENST00000483888 STT3BQ8TCJ2 826 aa9.52□□□□□ -0.88
COL12A1-207ENST00000483888 MAFBQ9Y5Q3 323 aaPredicted RBP9.52□□□□□ -0.88
COL12A1-207ENST00000483888 LOC105371267A0A1B0GV96 52 aa9.52□□□□□ -0.88
COL12A1-207ENST00000483888 B4GALT3O60512 393 aa9.52□□□□□ -0.88
COL12A1-207ENST00000483888 CPEB2Q7Z5Q1 589 aaKnown RBP9.52□□□□□ -0.88
COL12A1-207ENST00000483888 C19orf47Q8N9M1 422 aaKnown RBP9.52□□□□□ -0.88
COL12A1-207ENST00000483888 IL1F10Q8WWZ1 152 aa9.52□□□□□ -0.88
COL12A1-207ENST00000483888 TMEM234Q8WY98 164 aa9.52□□□□□ -0.88
COL12A1-207ENST00000483888 HOXA11P31270 313 aaPredicted RBP9.52□□□□□ -0.89
COL12A1-207ENST00000483888 CRYBB1P53674 252 aaPredicted RBP9.52□□□□□ -0.89
COL12A1-207ENST00000483888 CASP6P55212 293 aa9.52□□□□□ -0.89
COL12A1-207ENST00000483888 TBPL1P62380 186 aa9.52□□□□□ -0.89
COL12A1-207ENST00000483888 Q1RN00 199 aa9.52□□□□□ -0.89
COL12A1-207ENST00000483888 PSRC1Q6PGN9 363 aaPredicted RBP9.52□□□□□ -0.89
COL12A1-207ENST00000483888 MTURNQ8N3F0 131 aa9.52□□□□□ -0.89
COL12A1-207ENST00000483888 ST6GAL2Q96JF0 529 aa9.52□□□□□ -0.89
COL12A1-207ENST00000483888 OR2A14Q96R47 310 aa9.52□□□□□ -0.89
COL12A1-207ENST00000483888 TMEM9BQ9NQ34 198 aa9.52□□□□□ -0.89
COL12A1-207ENST00000483888 OR1A1Q9P1Q5 309 aa9.52□□□□□ -0.89
COL12A1-207ENST00000483888 ZNFX1Q9P2E3 1918 aaKnown RBP9.52□□□□□ -0.89
COL12A1-207ENST00000483888 HMX2A2RU54 273 aa9.52□□□□□ -0.89
COL12A1-207ENST00000483888 RAB27BO00194 218 aa9.52□□□□□ -0.89
COL12A1-207ENST00000483888 NFATC1O95644 943 aa9.52□□□□□ -0.89
COL12A1-207ENST00000483888 HOXC6P09630 235 aa9.52□□□□□ -0.89
COL12A1-207ENST00000483888 HTR6P50406 440 aa9.52□□□□□ -0.89
COL12A1-207ENST00000483888 GPR174Q9BXC1 333 aa9.52□□□□□ -0.89
COL12A1-207ENST00000483888 CTSFQ9UBX1 484 aa9.52□□□□□ -0.89
COL12A1-207ENST00000483888 SLC23A2Q9UGH3 650 aa9.52□□□□□ -0.89
COL12A1-207ENST00000483888 PPM1DO15297 605 aa9.52□□□□□ -0.89
COL12A1-207ENST00000483888 GPRIN2O60269 458 aa9.52□□□□□ -0.89
COL12A1-207ENST00000483888 RPL12P30050 165 aaKnown RBP9.52□□□□□ -0.89
COL12A1-207ENST00000483888 KCNJ3P48549 501 aa9.52□□□□□ -0.89
COL12A1-207ENST00000483888 NFATC2Q13469 925 aa9.52□□□□□ -0.89
COL12A1-207ENST00000483888 GFRA2O00451 464 aa9.52□□□□□ -0.89
COL12A1-207ENST00000483888 SCO2O43819 266 aa9.52□□□□□ -0.89
COL12A1-207ENST00000483888 ADAM11O75078 769 aa9.52□□□□□ -0.89
COL12A1-207ENST00000483888 ACP5P13686 325 aa9.52□□□□□ -0.89
COL12A1-207ENST00000483888 EFNA3P52797 238 aa9.52□□□□□ -0.89
COL12A1-207ENST00000483888 SIRPAP78324 504 aa9.52□□□□□ -0.89
COL12A1-207ENST00000483888 HOXC5Q00444 222 aa9.52□□□□□ -0.89
COL12A1-207ENST00000483888 DOC2AQ14183 400 aa9.52□□□□□ -0.89
COL12A1-207ENST00000483888 LINC00116Q8NCU8 138 aa9.52□□□□□ -0.89
COL12A1-207ENST00000483888 GCDHQ92947 438 aaPredicted RBP9.52□□□□□ -0.89
COL12A1-207ENST00000483888 CMBLQ96DG6 245 aa9.52□□□□□ -0.89
COL12A1-207ENST00000483888 TAAR9Q96RI9 348 aa9.52□□□□□ -0.89
COL12A1-207ENST00000483888 HERPUD2Q9BSE4 406 aa9.52□□□□□ -0.89
COL12A1-207ENST00000483888 ABHD6Q9BV23 337 aa9.52□□□□□ -0.89
COL12A1-207ENST00000483888 SLIRPQ9GZT3 109 aaKnown RBP9.52□□□□□ -0.89
COL12A1-207ENST00000483888 IL36AQ9UHA7 158 aa9.52□□□□□ -0.89
COL12A1-207ENST00000483888 PADI1Q9ULC6 663 aa9.52□□□□□ -0.89
COL12A1-207ENST00000483888 HEATR1Q9H583 2144 aaKnown RBP9.52□□□□□ -0.89
COL12A1-207ENST00000483888 FEZF1A0PJY2 475 aa9.52□□□□□ -0.89
COL12A1-207ENST00000483888 OR2J2O76002 312 aa9.52□□□□□ -0.89
COL12A1-207ENST00000483888 STC2O76061 302 aa9.52□□□□□ -0.89
COL12A1-207ENST00000483888 ZNF17P17021 662 aa9.52□□□□□ -0.89
COL12A1-207ENST00000483888 NAGAP17050 411 aa9.52□□□□□ -0.89
COL12A1-207ENST00000483888 NOVA1P51513 510 aaKnown RBP9.52□□□□□ -0.89
COL12A1-207ENST00000483888 MANEAQ5SRI9 462 aa9.52□□□□□ -0.89
COL12A1-207ENST00000483888 ZNF787Q6DD87 383 aa9.52□□□□□ -0.89
COL12A1-207ENST00000483888 NAXDQ8IW45 347 aa9.52□□□□□ -0.89
COL12A1-207ENST00000483888 HHLA2Q9UM44 414 aa9.52□□□□□ -0.89
COL12A1-207ENST00000483888 CHD1O14646 1710 aa9.52□□□□□ -0.89
COL12A1-207ENST00000483888 LOC102723971A0A1B0GUV8 181 aa9.52□□□□□ -0.89
COL12A1-207ENST00000483888 SSSCA1O60232 199 aa9.52□□□□□ -0.89
COL12A1-207ENST00000483888 PAPLNO95428 1278 aa9.52□□□□□ -0.89
COL12A1-207ENST00000483888 RPS24P62847 133 aaKnown RBP9.52□□□□□ -0.89
COL12A1-207ENST00000483888 ZNF684Q5T5D7 378 aa9.52□□□□□ -0.89
COL12A1-207ENST00000483888 STUMQ69YW2 141 aa9.52□□□□□ -0.89
COL12A1-207ENST00000483888 LCN15Q6UWW0 184 aa9.52□□□□□ -0.89
COL12A1-207ENST00000483888 TRILQ7L0X0 811 aa9.52□□□□□ -0.89
COL12A1-207ENST00000483888 COMMD6Q7Z4G1 85 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms