RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 NRIP2Q9BQI9 281 aa10.78□□□□□ -0.68
VTI1A-205ENST00000483122 TMEM27Q9HBJ8 222 aa10.78□□□□□ -0.68
VTI1A-205ENST00000483122 RCC2Q9P258 522 aaKnown RBP10.78□□□□□ -0.68
VTI1A-205ENST00000483122 ADAM29Q9UKF5 820 aa10.78□□□□□ -0.68
VTI1A-205ENST00000483122 NOP16Q9Y3C1 178 aaKnown RBP10.78□□□□□ -0.68
VTI1A-205ENST00000483122 POM121BA6NF01 834 aa10.77□□□□□ -0.68
VTI1A-205ENST00000483122 M0QYG6 137 aa10.77□□□□□ -0.68
VTI1A-205ENST00000483122 AIFM1O95831 613 aa10.77□□□□□ -0.68
VTI1A-205ENST00000483122 MUC1P15941 1255 aaPredicted RBP10.77□□□□□ -0.68
VTI1A-205ENST00000483122 HIST1H1CP16403 213 aaKnown RBP10.77□□□□□ -0.68
VTI1A-205ENST00000483122 DDX6P26196 483 aaKnown RBP eCLIP10.77□□□□□ -0.68
VTI1A-205ENST00000483122 CD34P28906 385 aa10.77□□□□□ -0.68
VTI1A-205ENST00000483122 EPHB3P54753 998 aa10.77□□□□□ -0.68
VTI1A-205ENST00000483122 F2RL1P55085 397 aa10.77□□□□□ -0.68
VTI1A-205ENST00000483122 ACTR1AP61163 376 aa10.77□□□□□ -0.68
VTI1A-205ENST00000483122 TRA2BP62995 288 aaKnown RBP10.77□□□□□ -0.68
VTI1A-205ENST00000483122 EEF1A1P68104 462 aaKnown RBP10.77□□□□□ -0.68
VTI1A-205ENST00000483122 SRSF4Q08170 494 aaKnown RBP10.77□□□□□ -0.68
VTI1A-205ENST00000483122 DHRS2Q13268 280 aa10.77□□□□□ -0.68
VTI1A-205ENST00000483122 KCNAB1Q14722 419 aa10.77□□□□□ -0.68
VTI1A-205ENST00000483122 TMPRSS11FQ6ZWK6 438 aa10.77□□□□□ -0.68
VTI1A-205ENST00000483122 SLC29A4Q7RTT9 530 aa10.77□□□□□ -0.68
VTI1A-205ENST00000483122 ZNF547Q8IVP9 402 aa10.77□□□□□ -0.68
VTI1A-205ENST00000483122 DCUN1D3Q8IWE4 304 aa10.77□□□□□ -0.68
VTI1A-205ENST00000483122 RNF113BQ8IZP6 322 aaKnown RBP10.77□□□□□ -0.68
VTI1A-205ENST00000483122 CLEC1AQ8NC01 280 aa10.77□□□□□ -0.68
VTI1A-205ENST00000483122 VN1R2Q8NFZ6 395 aa10.77□□□□□ -0.68
VTI1A-205ENST00000483122 CXorf40AQ8TE69 158 aa10.77□□□□□ -0.68
VTI1A-205ENST00000483122 FGF13Q92913 245 aa10.77□□□□□ -0.68
VTI1A-205ENST00000483122 HIST1H2BAQ96A08 127 aa10.77□□□□□ -0.68
VTI1A-205ENST00000483122 MRPL38Q96DV4 380 aaKnown RBP10.77□□□□□ -0.68
VTI1A-205ENST00000483122 IER2Q9BTL4 223 aa10.77□□□□□ -0.68
VTI1A-205ENST00000483122 EGLN1Q9GZT9 426 aa10.77□□□□□ -0.68
VTI1A-205ENST00000483122 SLITRK2Q9H156 845 aa10.77□□□□□ -0.68
VTI1A-205ENST00000483122 PRSS16Q9NQE7 514 aa10.77□□□□□ -0.68
VTI1A-205ENST00000483122 TMEM100Q9NV29 134 aa10.77□□□□□ -0.68
VTI1A-205ENST00000483122 WDR45Q9Y484 360 aa10.77□□□□□ -0.68
VTI1A-205ENST00000483122 YIPF1Q9Y548 306 aa10.77□□□□□ -0.68
VTI1A-205ENST00000483122 PCYT1BQ9Y5K3 369 aaPredicted RBP10.77□□□□□ -0.68
VTI1A-205ENST00000483122 TRAV8-7A0A075B6U6 113 aa10.77□□□□□ -0.69
VTI1A-205ENST00000483122 NPIPA5A0A0B4J1W7 369 aa10.77□□□□□ -0.69
VTI1A-205ENST00000483122 NPIPA7E9PJI5 369 aa10.77□□□□□ -0.69
VTI1A-205ENST00000483122 WRBO00258 174 aa10.77□□□□□ -0.69
VTI1A-205ENST00000483122 CTAG2O75638 210 aa10.77□□□□□ -0.69
VTI1A-205ENST00000483122 RPP14O95059 124 aaKnown RBP10.77□□□□□ -0.69
VTI1A-205ENST00000483122 RNF224P0DH78 156 aa10.77□□□□□ -0.69
VTI1A-205ENST00000483122 NPIPA8P0DM63 369 aa10.77□□□□□ -0.69
VTI1A-205ENST00000483122 CSRP1P21291 193 aaKnown RBP10.77□□□□□ -0.69
VTI1A-205ENST00000483122 GPX4P36969 197 aaPredicted RBP10.77□□□□□ -0.69
VTI1A-205ENST00000483122 CXADRP78310 365 aa10.77□□□□□ -0.69
VTI1A-205ENST00000483122 VWA2Q5GFL6 755 aa10.77□□□□□ -0.69
VTI1A-205ENST00000483122 SLC8B1Q6J4K2 584 aa10.77□□□□□ -0.69
VTI1A-205ENST00000483122 RPL13AP3Q6NVV1 102 aa10.77□□□□□ -0.69
VTI1A-205ENST00000483122 FAM111BQ6SJ93 734 aa10.77□□□□□ -0.69
VTI1A-205ENST00000483122 DPPA4Q7L190 304 aa10.77□□□□□ -0.69
VTI1A-205ENST00000483122 RANBP3LQ86VV4 465 aaPredicted RBP10.77□□□□□ -0.69
VTI1A-205ENST00000483122 PARGQ86W56 976 aa10.77□□□□□ -0.69
VTI1A-205ENST00000483122 GABRG1Q8N1C3 465 aa10.77□□□□□ -0.69
VTI1A-205ENST00000483122 OR10R2Q8NGX6 335 aa10.77□□□□□ -0.69
VTI1A-205ENST00000483122 TMED6Q8WW62 240 aa10.77□□□□□ -0.69
VTI1A-205ENST00000483122 RSRP1Q9BUV0 290 aa10.77□□□□□ -0.69
VTI1A-205ENST00000483122 MRI1Q9BV20 369 aa10.77□□□□□ -0.69
VTI1A-205ENST00000483122 ACTRT3Q9BYD9 372 aa10.77□□□□□ -0.69
VTI1A-205ENST00000483122 SELENOIQ9C0D9 397 aa10.77□□□□□ -0.69
VTI1A-205ENST00000483122 LAT2Q9GZY6 243 aa10.77□□□□□ -0.69
VTI1A-205ENST00000483122 TRPV4Q9HBA0 871 aa10.77□□□□□ -0.69
VTI1A-205ENST00000483122 MMP26Q9NRE1 261 aa10.77□□□□□ -0.69
VTI1A-205ENST00000483122 SLC25A13Q9UJS0 675 aa10.77□□□□□ -0.69
VTI1A-205ENST00000483122 PLEKHA6Q9Y2H5 1048 aa10.77□□□□□ -0.69
VTI1A-205ENST00000483122 TBC1D3EA0A087X179 549 aa10.76□□□□□ -0.69
VTI1A-205ENST00000483122 A0A1B0GVT2 93 aa10.76□□□□□ -0.69
VTI1A-205ENST00000483122 GXYLT2A0PJZ3 443 aa10.76□□□□□ -0.69
VTI1A-205ENST00000483122 ST8SIA5O15466 376 aa10.76□□□□□ -0.69
VTI1A-205ENST00000483122 CSNK2A2P19784 350 aaPredicted RBP10.76□□□□□ -0.69
VTI1A-205ENST00000483122 SSTP61278 116 aa10.76□□□□□ -0.69
VTI1A-205ENST00000483122 PJVKQ0ZLH3 352 aa10.76□□□□□ -0.69
VTI1A-205ENST00000483122 SLC9A5Q14940 896 aa10.76□□□□□ -0.69
VTI1A-205ENST00000483122 TGIF1Q15583 401 aa10.76□□□□□ -0.69
VTI1A-205ENST00000483122 RNF212Q495C1 297 aa10.76□□□□□ -0.69
VTI1A-205ENST00000483122 ATPAF1Q5TC12 328 aaPredicted RBP10.76□□□□□ -0.69
VTI1A-205ENST00000483122 CDK20Q8IZL9 346 aa10.76□□□□□ -0.69
VTI1A-205ENST00000483122 GALNT16Q8N428 558 aa10.76□□□□□ -0.69
VTI1A-205ENST00000483122 OR51D1Q8NGF3 324 aa10.76□□□□□ -0.69
VTI1A-205ENST00000483122 STOML3Q8TAV4 291 aa10.76□□□□□ -0.69
VTI1A-205ENST00000483122 RPS4Y2Q8TD47 263 aa10.76□□□□□ -0.69
VTI1A-205ENST00000483122 EDAQ92838 391 aa10.76□□□□□ -0.69
VTI1A-205ENST00000483122 MOAP1Q96BY2 351 aa10.76□□□□□ -0.69
VTI1A-205ENST00000483122 PIK3IP1Q96FE7 263 aa10.76□□□□□ -0.69
VTI1A-205ENST00000483122 Q96M85 177 aa10.76□□□□□ -0.69
VTI1A-205ENST00000483122 CASD1Q96PB1 797 aa10.76□□□□□ -0.69
VTI1A-205ENST00000483122 NKX3-1Q99801 234 aaPredicted RBP10.76□□□□□ -0.69
VTI1A-205ENST00000483122 MTHFD2LQ9H903 347 aaPredicted RBP10.76□□□□□ -0.69
VTI1A-205ENST00000483122 METTL1Q9UBP6 276 aaKnown RBP10.76□□□□□ -0.69
VTI1A-205ENST00000483122 MED31Q9Y3C7 131 aa10.76□□□□□ -0.69
VTI1A-205ENST00000483122 A0A1B0GTH9 108 aa10.76□□□□□ -0.69
VTI1A-205ENST00000483122 WASH3PC4AMC7 463 aa10.76□□□□□ -0.69
VTI1A-205ENST00000483122 ALOX12BO75342 701 aa10.76□□□□□ -0.69
VTI1A-205ENST00000483122 RDH16O75452 317 aa10.76□□□□□ -0.69
VTI1A-205ENST00000483122 TIMP1P01033 207 aa10.76□□□□□ -0.69
VTI1A-205ENST00000483122 IFNGP01579 166 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms