RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 SFXN2Q96NB2 322 aa5.57□□□□□ -1.52
SF3B1-209ENST00000479532 TAAR6Q96RI8 345 aa5.57□□□□□ -1.52
SF3B1-209ENST00000479532 SLC29A1Q99808 456 aa5.57□□□□□ -1.52
SF3B1-209ENST00000479532 DEFB127Q9H1M4 99 aa5.57□□□□□ -1.52
SF3B1-209ENST00000479532 ZDHHC11Q9H8X9 412 aa5.57□□□□□ -1.52
SF3B1-209ENST00000479532 ZNF556Q9HAH1 456 aa5.57□□□□□ -1.52
SF3B1-209ENST00000479532 ACKR4Q9NPB9 350 aa5.57□□□□□ -1.52
SF3B1-209ENST00000479532 SERINC1Q9NRX5 453 aa5.57□□□□□ -1.52
SF3B1-209ENST00000479532 ASF1BQ9NVP2 202 aa5.57□□□□□ -1.52
SF3B1-209ENST00000479532 TESQ9UGI8 421 aaKnown RBP5.57□□□□□ -1.52
SF3B1-209ENST00000479532 FBXL2Q9UKC9 423 aa5.57□□□□□ -1.52
SF3B1-209ENST00000479532 VDAC3Q9Y277 283 aa5.57□□□□□ -1.52
SF3B1-209ENST00000479532 CAB39Q9Y376 341 aaPredicted RBP5.57□□□□□ -1.52
SF3B1-209ENST00000479532 SNX13Q9Y5W8 968 aa5.57□□□□□ -1.52
SF3B1-209ENST00000479532 CFAP47Q6ZTR5 3102 aa5.57□□□□□ -1.52
SF3B1-209ENST00000479532 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.56□□□□□ -1.52
SF3B1-209ENST00000479532 CENPVL1A0A0U1RR11 272 aa5.56□□□□□ -1.52
SF3B1-209ENST00000479532 A0A1W2PPW3 197 aa5.56□□□□□ -1.52
SF3B1-209ENST00000479532 TUBAL3A6NHL2 446 aa5.56□□□□□ -1.52
SF3B1-209ENST00000479532 CENPXA8MT69 81 aa5.56□□□□□ -1.52
SF3B1-209ENST00000479532 H0YAE9 185 aa5.56□□□□□ -1.52
SF3B1-209ENST00000479532 FAAHO00519 579 aa5.56□□□□□ -1.52
SF3B1-209ENST00000479532 BCKDKO14874 412 aa5.56□□□□□ -1.52
SF3B1-209ENST00000479532 OR5F1O95221 314 aa5.56□□□□□ -1.52
SF3B1-209ENST00000479532 LGI1O95970 557 aa5.56□□□□□ -1.52
SF3B1-209ENST00000479532 SERPINA1P01009 418 aa5.56□□□□□ -1.52
SF3B1-209ENST00000479532 IGHG3P01860 377 aa5.56□□□□□ -1.52
SF3B1-209ENST00000479532 OPN1SWP03999 348 aa5.56□□□□□ -1.52
SF3B1-209ENST00000479532 HRGP04196 525 aa5.56□□□□□ -1.52
SF3B1-209ENST00000479532 RFPL3SP0C7P2 107 aa5.56□□□□□ -1.52
SF3B1-209ENST00000479532 PEPDP12955 493 aa5.56□□□□□ -1.52
SF3B1-209ENST00000479532 NCK1P16333 377 aa5.56□□□□□ -1.52
SF3B1-209ENST00000479532 CHMP24386 653 aa5.56□□□□□ -1.52
SF3B1-209ENST00000479532 FKBP2P26885 142 aaKnown RBP5.56□□□□□ -1.52
SF3B1-209ENST00000479532 ELK4P28324 431 aa5.56□□□□□ -1.52
SF3B1-209ENST00000479532 ERP29P30040 261 aaKnown RBP5.56□□□□□ -1.52
SF3B1-209ENST00000479532 RYKP34925 604 aa5.56□□□□□ -1.52
SF3B1-209ENST00000479532 RPS5P46782 204 aaKnown RBP5.56□□□□□ -1.52
SF3B1-209ENST00000479532 KCNJ5P48544 419 aa5.56□□□□□ -1.52
SF3B1-209ENST00000479532 IDH2P48735 452 aaKnown RBP5.56□□□□□ -1.52
SF3B1-209ENST00000479532 PER3P56645 1201 aa5.56□□□□□ -1.52
SF3B1-209ENST00000479532 DEFA1P59665 94 aa5.56□□□□□ -1.52
SF3B1-209ENST00000479532 DEFA3P59666 94 aa5.56□□□□□ -1.52
SF3B1-209ENST00000479532 SELENOWP63302 87 aa5.56□□□□□ -1.52
SF3B1-209ENST00000479532 MRPS15P82914 257 aaKnown RBP5.56□□□□□ -1.52
SF3B1-209ENST00000479532 GALK2Q01415 458 aa5.56□□□□□ -1.52
SF3B1-209ENST00000479532 EPS8Q12929 822 aa5.56□□□□□ -1.52
SF3B1-209ENST00000479532 FLOT2Q14254 428 aa5.56□□□□□ -1.52
SF3B1-209ENST00000479532 RAB39AQ14964 217 aa5.56□□□□□ -1.52
SF3B1-209ENST00000479532 QPRTQ15274 297 aa5.56□□□□□ -1.52
SF3B1-209ENST00000479532 PLPPR5Q32ZL2 321 aa5.56□□□□□ -1.52
SF3B1-209ENST00000479532 NDUFAF6Q330K2 333 aa5.56□□□□□ -1.52
SF3B1-209ENST00000479532 IFI44LQ53G44 452 aa5.56□□□□□ -1.52
SF3B1-209ENST00000479532 CYBRD1Q53TN4 286 aa5.56□□□□□ -1.52
SF3B1-209ENST00000479532 C19orf54Q5BKX5 351 aa5.56□□□□□ -1.52
SF3B1-209ENST00000479532 NHSL2Q5HYW2 709 aa5.56□□□□□ -1.52
SF3B1-209ENST00000479532 WBP2NLQ6ICG8 309 aa5.56□□□□□ -1.52
SF3B1-209ENST00000479532 CORO6Q6QEF8 472 aa5.56□□□□□ -1.52
SF3B1-209ENST00000479532 CREB3L2Q70SY1 520 aa5.56□□□□□ -1.52
SF3B1-209ENST00000479532 TRILQ7L0X0 811 aa5.56□□□□□ -1.52
SF3B1-209ENST00000479532 GRINAQ7Z429 371 aa5.56□□□□□ -1.52
SF3B1-209ENST00000479532 YRDCQ86U90 279 aaKnown RBP5.56□□□□□ -1.52
SF3B1-209ENST00000479532 CYP4Z1Q86W10 505 aa5.56□□□□□ -1.52
SF3B1-209ENST00000479532 DHFR2Q86XF0 187 aa5.56□□□□□ -1.52
SF3B1-209ENST00000479532 CADM2Q8N3J6 435 aa5.56□□□□□ -1.52
SF3B1-209ENST00000479532 ZNF843Q8N446 348 aa5.56□□□□□ -1.52
SF3B1-209ENST00000479532 GALNT4Q8N4A0 578 aa5.56□□□□□ -1.52
SF3B1-209ENST00000479532 ST6GALNAC3Q8NDV1 305 aa5.56□□□□□ -1.52
SF3B1-209ENST00000479532 FAM71CQ8NEG0 241 aa5.56□□□□□ -1.52
SF3B1-209ENST00000479532 OR52E4Q8NGH9 312 aa5.56□□□□□ -1.52
SF3B1-209ENST00000479532 NEIL3Q8TAT5 605 aa5.56□□□□□ -1.52
SF3B1-209ENST00000479532 GPR119Q8TDV5 335 aa5.56□□□□□ -1.52
SF3B1-209ENST00000479532 GEMIN6Q8WXD5 167 aaKnown RBP5.56□□□□□ -1.52
SF3B1-209ENST00000479532 CNOT9Q92600 299 aaKnown RBP5.56□□□□□ -1.52
SF3B1-209ENST00000479532 GCDHQ92947 438 aaPredicted RBP5.56□□□□□ -1.52
SF3B1-209ENST00000479532 CCDC124Q96CT7 223 aaKnown RBP5.56□□□□□ -1.52
SF3B1-209ENST00000479532 NTNG2Q96CW9 530 aa5.56□□□□□ -1.52
SF3B1-209ENST00000479532 ZG16BQ96DA0 208 aa5.56□□□□□ -1.52
SF3B1-209ENST00000479532 ASB9Q96DX5 294 aa5.56□□□□□ -1.52
SF3B1-209ENST00000479532 AJUBAQ96IF1 538 aa5.56□□□□□ -1.52
SF3B1-209ENST00000479532 MRGPRX4Q96LA9 322 aa5.56□□□□□ -1.52
SF3B1-209ENST00000479532 RDH12Q96NR8 316 aa5.56□□□□□ -1.52
SF3B1-209ENST00000479532 BBC3Q96PG8 261 aaPredicted RBP5.56□□□□□ -1.52
SF3B1-209ENST00000479532 ZNF559Q9BR84 538 aa5.56□□□□□ -1.52
SF3B1-209ENST00000479532 RTN4RQ9BZR6 473 aa5.56□□□□□ -1.52
SF3B1-209ENST00000479532 TRIM2Q9C040 744 aa5.56□□□□□ -1.52
SF3B1-209ENST00000479532 POLR2J2Q9GZM3 115 aaKnown RBP5.56□□□□□ -1.52
SF3B1-209ENST00000479532 POLR2J3Q9H1A7 115 aaKnown RBP5.56□□□□□ -1.52
SF3B1-209ENST00000479532 SLC6A15Q9H2J7 730 aa5.56□□□□□ -1.52
SF3B1-209ENST00000479532 UBQLN3Q9H347 655 aa5.56□□□□□ -1.52
SF3B1-209ENST00000479532 NIPAL2Q9H841 368 aa5.56□□□□□ -1.52
SF3B1-209ENST00000479532 GORASP2Q9H8Y8 452 aa5.56□□□□□ -1.52
SF3B1-209ENST00000479532 TMEM27Q9HBJ8 222 aa5.56□□□□□ -1.52
SF3B1-209ENST00000479532 ACER3Q9NUN7 267 aa5.56□□□□□ -1.52
SF3B1-209ENST00000479532 MED17Q9NVC6 651 aa5.56□□□□□ -1.52
SF3B1-209ENST00000479532 MRPL39Q9NYK5 338 aaKnown RBP5.56□□□□□ -1.52
SF3B1-209ENST00000479532 ACTR3BQ9P1U1 418 aa5.56□□□□□ -1.52
SF3B1-209ENST00000479532 CD300AQ9UGN4 299 aa5.56□□□□□ -1.52
SF3B1-209ENST00000479532 KCNE5Q9UJ90 142 aa5.56□□□□□ -1.52
SF3B1-209ENST00000479532 ICAM5Q9UMF0 924 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms