RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 ZNF416Q9BWM5 594 aa12.14□□□□□ -0.47
PDZRN3-208ENST00000479530 C19orf53Q9UNZ5 99 aaPredicted RBP12.14□□□□□ -0.47
PDZRN3-208ENST00000479530 HEBP2Q9Y5Z4 205 aa12.14□□□□□ -0.47
PDZRN3-208ENST00000479530 BRWD1Q9NSI6 2320 aa12.14□□□□□ -0.47
PDZRN3-208ENST00000479530 A0A0B4J2E0 115 aa12.14□□□□□ -0.47
PDZRN3-208ENST00000479530 A0A1B0GX12 115 aa12.14□□□□□ -0.47
PDZRN3-208ENST00000479530 OR6C68A6NDL8 312 aa12.14□□□□□ -0.47
PDZRN3-208ENST00000479530 HMSDA8MTL9 139 aa12.14□□□□□ -0.47
PDZRN3-208ENST00000479530 CYR61O00622 381 aa12.14□□□□□ -0.47
PDZRN3-208ENST00000479530 ITPKBP27987 946 aa12.14□□□□□ -0.47
PDZRN3-208ENST00000479530 MECP2P51608 486 aaKnown RBP12.14□□□□□ -0.47
PDZRN3-208ENST00000479530 GUCA2AQ02747 115 aa12.14□□□□□ -0.47
PDZRN3-208ENST00000479530 HYAL1Q12794 435 aa12.14□□□□□ -0.47
PDZRN3-208ENST00000479530 COL19A1Q14993 1142 aa12.14□□□□□ -0.47
PDZRN3-208ENST00000479530 ARHGAP11AQ6P4F7 1023 aa12.14□□□□□ -0.47
PDZRN3-208ENST00000479530 TMEM92Q6UXU6 159 aa12.14□□□□□ -0.47
PDZRN3-208ENST00000479530 CDH26Q8IXH8 852 aa12.14□□□□□ -0.47
PDZRN3-208ENST00000479530 COX18Q8N8Q8 333 aa12.14□□□□□ -0.47
PDZRN3-208ENST00000479530 HSPA12BQ96MM6 686 aa12.14□□□□□ -0.47
PDZRN3-208ENST00000479530 NKX3-1Q99801 234 aaPredicted RBP12.14□□□□□ -0.47
PDZRN3-208ENST00000479530 GABRG3Q99928 467 aa12.14□□□□□ -0.47
PDZRN3-208ENST00000479530 ARPC4-TTLL3A0A0A6YYG9 625 aa12.13□□□□□ -0.47
PDZRN3-208ENST00000479530 ACOT7O00154 380 aa12.13□□□□□ -0.47
PDZRN3-208ENST00000479530 ITGA10O75578 1167 aa12.13□□□□□ -0.47
PDZRN3-208ENST00000479530 IFNGP01579 166 aa12.13□□□□□ -0.47
PDZRN3-208ENST00000479530 ACHEP22303 614 aa12.13□□□□□ -0.47
PDZRN3-208ENST00000479530 SLC6A6P31641 620 aa12.13□□□□□ -0.47
PDZRN3-208ENST00000479530 FNTBP49356 437 aa12.13□□□□□ -0.47
PDZRN3-208ENST00000479530 EMDP50402 254 aa12.13□□□□□ -0.47
PDZRN3-208ENST00000479530 DEFA5Q01523 94 aa12.13□□□□□ -0.47
PDZRN3-208ENST00000479530 ZNF169Q14929 603 aaPredicted RBP12.13□□□□□ -0.47
PDZRN3-208ENST00000479530 UBXN2BQ14CS0 331 aa12.13□□□□□ -0.47
PDZRN3-208ENST00000479530 STAC2Q6ZMT1 411 aa12.13□□□□□ -0.47
PDZRN3-208ENST00000479530 NAXDQ8IW45 347 aa12.13□□□□□ -0.47
PDZRN3-208ENST00000479530 BOLLQ8N9W6 283 aaKnown RBP12.13□□□□□ -0.47
PDZRN3-208ENST00000479530 OR2AK2Q8NG84 335 aa12.13□□□□□ -0.47
PDZRN3-208ENST00000479530 OR14A16Q8NHC5 309 aa12.13□□□□□ -0.47
PDZRN3-208ENST00000479530 Q96M85 177 aa12.13□□□□□ -0.47
PDZRN3-208ENST00000479530 WDR92Q96MX6 357 aa12.13□□□□□ -0.47
PDZRN3-208ENST00000479530 KCNK15Q9H427 330 aa12.13□□□□□ -0.47
PDZRN3-208ENST00000479530 FAM60AQ9NP50 221 aa12.13□□□□□ -0.47
PDZRN3-208ENST00000479530 GLS2Q9UI32 602 aa12.13□□□□□ -0.47
PDZRN3-208ENST00000479530 SERTAD3Q9UJW9 196 aa12.13□□□□□ -0.47
PDZRN3-208ENST00000479530 MRTO4Q9UKD2 239 aaKnown RBP12.13□□□□□ -0.47
PDZRN3-208ENST00000479530 ZNF281Q9Y2X9 895 aa12.13□□□□□ -0.47
PDZRN3-208ENST00000479530 SLCO1B1Q9Y6L6 691 aa12.13□□□□□ -0.47
PDZRN3-208ENST00000479530 ATG2AQ2TAZ0 1938 aa12.13□□□□□ -0.47
PDZRN3-208ENST00000479530 F5H5P2 479 aa12.13□□□□□ -0.47
PDZRN3-208ENST00000479530 SMAD9O15198 467 aaKnown RBP12.13□□□□□ -0.47
PDZRN3-208ENST00000479530 CDC123O75794 336 aaPredicted RBP12.13□□□□□ -0.47
PDZRN3-208ENST00000479530 AGR2O95994 175 aa12.13□□□□□ -0.47
PDZRN3-208ENST00000479530 TNFRSF4P43489 277 aa12.13□□□□□ -0.47
PDZRN3-208ENST00000479530 ART1P52961 327 aa12.13□□□□□ -0.47
PDZRN3-208ENST00000479530 NDUFAF6Q330K2 333 aa12.13□□□□□ -0.47
PDZRN3-208ENST00000479530 CLVS2Q5SYC1 327 aa12.13□□□□□ -0.47
PDZRN3-208ENST00000479530 ELSPBP1Q96BH3 223 aa12.13□□□□□ -0.47
PDZRN3-208ENST00000479530 RASD2Q96D21 266 aa12.13□□□□□ -0.47
PDZRN3-208ENST00000479530 LRRC46Q96FV0 321 aa12.13□□□□□ -0.47
PDZRN3-208ENST00000479530 TSSK2Q96PF2 358 aa12.13□□□□□ -0.47
PDZRN3-208ENST00000479530 NKX2-4Q9H2Z4 354 aa12.13□□□□□ -0.47
PDZRN3-208ENST00000479530 SAV1Q9H4B6 383 aaPredicted RBP12.13□□□□□ -0.47
PDZRN3-208ENST00000479530 MED11Q9P086 117 aa12.13□□□□□ -0.47
PDZRN3-208ENST00000479530 ZNF230Q9UIE0 474 aaPredicted RBP12.13□□□□□ -0.47
PDZRN3-208ENST00000479530 TNFSF14O43557 240 aa12.13□□□□□ -0.47
PDZRN3-208ENST00000479530 IGKV1D-16P01601 117 aa12.13□□□□□ -0.47
PDZRN3-208ENST00000479530 MPGP29372 298 aa12.13□□□□□ -0.47
PDZRN3-208ENST00000479530 TLX1P31314 330 aaPredicted RBP12.13□□□□□ -0.47
PDZRN3-208ENST00000479530 EFNB2P52799 333 aa12.13□□□□□ -0.47
PDZRN3-208ENST00000479530 ERV3-1Q14264 604 aa12.13□□□□□ -0.47
PDZRN3-208ENST00000479530 PON3Q15166 354 aa12.13□□□□□ -0.47
PDZRN3-208ENST00000479530 NNATQ16517 81 aa12.13□□□□□ -0.47
PDZRN3-208ENST00000479530 PRICKLE4Q2TBC4 344 aa12.13□□□□□ -0.47
PDZRN3-208ENST00000479530 BIVMQ86UB2 503 aa12.13□□□□□ -0.47
PDZRN3-208ENST00000479530 GLB1L2Q8IW92 636 aa12.13□□□□□ -0.47
PDZRN3-208ENST00000479530 DND1Q8IYX4 353 aaKnown RBP12.13□□□□□ -0.47
PDZRN3-208ENST00000479530 EID2Q8N6I1 236 aa12.13□□□□□ -0.47
PDZRN3-208ENST00000479530 ZNF511Q8NB15 262 aa12.13□□□□□ -0.47
PDZRN3-208ENST00000479530 OR8K3Q8NH51 312 aa12.13□□□□□ -0.47
PDZRN3-208ENST00000479530 DVL3Q92997 716 aaPredicted RBP12.13□□□□□ -0.47
PDZRN3-208ENST00000479530 MIB2Q96AX9 1013 aa12.13□□□□□ -0.47
PDZRN3-208ENST00000479530 MFFQ9GZY8 342 aa12.13□□□□□ -0.47
PDZRN3-208ENST00000479530 WDR13Q9H1Z4 485 aa12.13□□□□□ -0.47
PDZRN3-208ENST00000479530 TMEM27Q9HBJ8 222 aa12.13□□□□□ -0.47
PDZRN3-208ENST00000479530 TMEM138Q9NPI0 162 aa12.13□□□□□ -0.47
PDZRN3-208ENST00000479530 PCDHB16Q9NRJ7 776 aa12.13□□□□□ -0.47
PDZRN3-208ENST00000479530 TRAV8-7A0A075B6U6 113 aa12.12□□□□□ -0.47
PDZRN3-208ENST00000479530 OR5K4A6NMS3 321 aa12.12□□□□□ -0.47
PDZRN3-208ENST00000479530 CTNSO60931 367 aa12.12□□□□□ -0.47
PDZRN3-208ENST00000479530 RDH16O75452 317 aa12.12□□□□□ -0.47
PDZRN3-208ENST00000479530 MAS1P04201 325 aa12.12□□□□□ -0.47
PDZRN3-208ENST00000479530 OR8G3PP0DMU2 310 aa12.12□□□□□ -0.47
PDZRN3-208ENST00000479530 DIO1P49895 249 aa12.12□□□□□ -0.47
PDZRN3-208ENST00000479530 C1orf61Q13536 156 aa12.12□□□□□ -0.47
PDZRN3-208ENST00000479530 FAM53BQ14153 422 aa12.12□□□□□ -0.47
PDZRN3-208ENST00000479530 GGTLC2Q14390 218 aa12.12□□□□□ -0.47
PDZRN3-208ENST00000479530 KIR2DS3Q14952 304 aa12.12□□□□□ -0.47
PDZRN3-208ENST00000479530 ODF4Q2M2E3 257 aa12.12□□□□□ -0.47
PDZRN3-208ENST00000479530 ALG10BQ5I7T1 473 aa12.12□□□□□ -0.47
PDZRN3-208ENST00000479530 TMPRSS12Q86WS5 348 aa12.12□□□□□ -0.47
PDZRN3-208ENST00000479530 POMGNT2Q8NAT1 580 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms