RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 PPP1R16AQ96I34 528 aa3.72□□□□□ -1.81
CCDC171-207ENST00000478913 IP6K3Q96PC2 410 aa3.72□□□□□ -1.81
CCDC171-207ENST00000478913 PKMYT1Q99640 499 aa3.72□□□□□ -1.81
CCDC171-207ENST00000478913 NPAS2Q99743 824 aa3.72□□□□□ -1.81
CCDC171-207ENST00000478913 COQ7Q99807 217 aa3.72□□□□□ -1.81
CCDC171-207ENST00000478913 CBWD1Q9BRT8 395 aa3.72□□□□□ -1.81
CCDC171-207ENST00000478913 FAM107BQ9H098 131 aa3.72□□□□□ -1.81
CCDC171-207ENST00000478913 SIRPDQ9H106 197 aa3.72□□□□□ -1.81
CCDC171-207ENST00000478913 SYTL2Q9HCH5 934 aa3.72□□□□□ -1.81
CCDC171-207ENST00000478913 DDX19AQ9NUU7 478 aaKnown RBP3.72□□□□□ -1.81
CCDC171-207ENST00000478913 IMPAD1Q9NX62 359 aa3.72□□□□□ -1.81
CCDC171-207ENST00000478913 PRODH2Q9UF12 536 aa3.72□□□□□ -1.81
CCDC171-207ENST00000478913 FETUBQ9UGM5 382 aa3.72□□□□□ -1.81
CCDC171-207ENST00000478913 IL19Q9UHD0 177 aa3.72□□□□□ -1.81
CCDC171-207ENST00000478913 UBQLN1Q9UMX0 589 aaKnown RBP3.72□□□□□ -1.81
CCDC171-207ENST00000478913 VSIG4Q9Y279 399 aa3.72□□□□□ -1.81
CCDC171-207ENST00000478913 MYH10P35580 1976 aa3.72□□□□□ -1.81
CCDC171-207ENST00000478913 TRIP11Q15643 1979 aa3.72□□□□□ -1.81
CCDC171-207ENST00000478913 STARD9Q9P2P6 4700 aa3.72□□□□□ -1.81
CCDC171-207ENST00000478913 WNK2Q9Y3S1 2297 aa3.72□□□□□ -1.81
CCDC171-207ENST00000478913 A0A0J9YVX5 310 aa3.71□□□□□ -1.82
CCDC171-207ENST00000478913 A0A1W2PQ72 361 aa3.71□□□□□ -1.82
CCDC171-207ENST00000478913 KPNA3O00505 521 aaPredicted RBP3.71□□□□□ -1.82
CCDC171-207ENST00000478913 ATP8B1O43520 1251 aa3.71□□□□□ -1.82
CCDC171-207ENST00000478913 ECDO95905 644 aaPredicted RBP3.71□□□□□ -1.82
CCDC171-207ENST00000478913 IGHV3-9P01782 118 aa3.71□□□□□ -1.82
CCDC171-207ENST00000478913 IVLP07476 585 aa3.71□□□□□ -1.82
CCDC171-207ENST00000478913 VDRP11473 427 aa3.71□□□□□ -1.82
CCDC171-207ENST00000478913 AHCYP23526 432 aa3.71□□□□□ -1.82
CCDC171-207ENST00000478913 PSMA5P28066 241 aa3.71□□□□□ -1.82
CCDC171-207ENST00000478913 ATP5C1P36542 298 aaKnown RBP3.71□□□□□ -1.82
CCDC171-207ENST00000478913 MAGEA4P43358 317 aa3.71□□□□□ -1.82
CCDC171-207ENST00000478913 STK19P49842 368 aaPredicted RBP3.71□□□□□ -1.82
CCDC171-207ENST00000478913 GFERP55789 205 aa3.71□□□□□ -1.82
CCDC171-207ENST00000478913 RAG2P55895 527 aa3.71□□□□□ -1.82
CCDC171-207ENST00000478913 LOXL1Q08397 574 aaPredicted RBP3.71□□□□□ -1.82
CCDC171-207ENST00000478913 MS4A13Q5J8X5 152 aa3.71□□□□□ -1.82
CCDC171-207ENST00000478913 OTUD6AQ7L8S5 288 aa3.71□□□□□ -1.82
CCDC171-207ENST00000478913 TSEN54Q7Z6J9 526 aaKnown RBP3.71□□□□□ -1.82
CCDC171-207ENST00000478913 C17orf82Q86X59 251 aaPredicted RBP3.71□□□□□ -1.82
CCDC171-207ENST00000478913 MNS1Q8NEH6 495 aa3.71□□□□□ -1.82
CCDC171-207ENST00000478913 OR52E1Q8NGJ3 308 aa3.71□□□□□ -1.82
CCDC171-207ENST00000478913 OR52J3Q8NH60 311 aa3.71□□□□□ -1.82
CCDC171-207ENST00000478913 PHYHIPQ92561 330 aa3.71□□□□□ -1.82
CCDC171-207ENST00000478913 MYLPFQ96A32 169 aa3.71□□□□□ -1.82
CCDC171-207ENST00000478913 PIK3IP1Q96FE7 263 aa3.71□□□□□ -1.82
CCDC171-207ENST00000478913 PDXPQ96GD0 296 aa3.71□□□□□ -1.82
CCDC171-207ENST00000478913 B9D2Q9BPU9 175 aa3.71□□□□□ -1.82
CCDC171-207ENST00000478913 ACBD6Q9BR61 282 aa3.71□□□□□ -1.82
CCDC171-207ENST00000478913 ABCG8Q9H221 673 aa3.71□□□□□ -1.82
CCDC171-207ENST00000478913 MOSPD1Q9UJG1 213 aa3.71□□□□□ -1.82
CCDC171-207ENST00000478913 DNPEPQ9ULA0 475 aa3.71□□□□□ -1.82
CCDC171-207ENST00000478913 PKHD1P08F94 4074 aa3.71□□□□□ -1.82
CCDC171-207ENST00000478913 DNAH10Q8IVF4 4471 aa3.7□□□□□ -1.82
CCDC171-207ENST00000478913 ARHGAP42A6NI28 874 aa3.7□□□□□ -1.82
CCDC171-207ENST00000478913 SLC4A1P02730 911 aa3.7□□□□□ -1.82
CCDC171-207ENST00000478913 CAPN1P07384 714 aa3.7□□□□□ -1.82
CCDC171-207ENST00000478913 CXCL8P10145 99 aa3.7□□□□□ -1.82
CCDC171-207ENST00000478913 ZNF30P17039 623 aa3.7□□□□□ -1.82
CCDC171-207ENST00000478913 MDKP21741 143 aaPredicted RBP3.7□□□□□ -1.82
CCDC171-207ENST00000478913 YBEYP58557 167 aaPredicted RBP3.7□□□□□ -1.82
CCDC171-207ENST00000478913 ZNF85Q03923 595 aa3.7□□□□□ -1.82
CCDC171-207ENST00000478913 ZKSCAN8Q15776 578 aaPredicted RBP3.7□□□□□ -1.82
CCDC171-207ENST00000478913 ZBTB6Q15916 424 aa3.7□□□□□ -1.82
CCDC171-207ENST00000478913 AGKQ53H12 422 aa3.7□□□□□ -1.82
CCDC171-207ENST00000478913 LIPKQ5VXJ0 399 aa3.7□□□□□ -1.82
CCDC171-207ENST00000478913 ASPHD2Q6ICH7 369 aa3.7□□□□□ -1.82
CCDC171-207ENST00000478913 PRSS48Q7RTY5 328 aa3.7□□□□□ -1.82
CCDC171-207ENST00000478913 AMZ2Q86W34 360 aa3.7□□□□□ -1.82
CCDC171-207ENST00000478913 GPBP1Q86WP2 473 aa3.7□□□□□ -1.82
CCDC171-207ENST00000478913 ZNF584Q8IVC4 421 aa3.7□□□□□ -1.82
CCDC171-207ENST00000478913 OR4F17Q8NGA8 305 aa3.7□□□□□ -1.82
CCDC171-207ENST00000478913 FBXO30Q8TB52 745 aa3.7□□□□□ -1.82
CCDC171-207ENST00000478913 TMA16Q96EY4 203 aaKnown RBP3.7□□□□□ -1.82
CCDC171-207ENST00000478913 OR4F4Q96R69 305 aa3.7□□□□□ -1.82
CCDC171-207ENST00000478913 TSPAN18Q96SJ8 248 aa3.7□□□□□ -1.82
CCDC171-207ENST00000478913 RIT2Q99578 217 aa3.7□□□□□ -1.82
CCDC171-207ENST00000478913 ALG9Q9H6U8 611 aa3.7□□□□□ -1.82
CCDC171-207ENST00000478913 DYRK4Q9NR20 520 aa3.7□□□□□ -1.82
CCDC171-207ENST00000478913 TNFRSF19Q9NS68 423 aa3.7□□□□□ -1.82
CCDC171-207ENST00000478913 ANO10Q9NW15 660 aa3.7□□□□□ -1.82
CCDC171-207ENST00000478913 CFAP45Q9UL16 551 aa3.7□□□□□ -1.82
CCDC171-207ENST00000478913 NYNRINQ9P2P1 1898 aaKnown RBP3.7□□□□□ -1.82
CCDC171-207ENST00000478913 PLECQ15149 4684 aaKnown RBP3.7□□□□□ -1.82
CCDC171-207ENST00000478913 HSPG2P98160 4391 aa3.69□□□□□ -1.82
CCDC171-207ENST00000478913 MFSD2BA6NFX1 497 aa3.69□□□□□ -1.82
CCDC171-207ENST00000478913 GABRR3A8MPY1 467 aa3.69□□□□□ -1.82
CCDC171-207ENST00000478913 H3BQV1 296 aa3.69□□□□□ -1.82
CCDC171-207ENST00000478913 ZSCAN12O43309 604 aa3.69□□□□□ -1.82
CCDC171-207ENST00000478913 ERLIN1O75477 346 aa3.69□□□□□ -1.82
CCDC171-207ENST00000478913 SCRG1O75711 98 aa3.69□□□□□ -1.82
CCDC171-207ENST00000478913 WNT2P09544 360 aa3.69□□□□□ -1.82
CCDC171-207ENST00000478913 FOLR1P15328 257 aa3.69□□□□□ -1.82
CCDC171-207ENST00000478913 ATP6V1E1P36543 226 aa3.69□□□□□ -1.82
CCDC171-207ENST00000478913 CCR8P51685 355 aa3.69□□□□□ -1.82
CCDC171-207ENST00000478913 ARHGDIBP52566 201 aa3.69□□□□□ -1.82
CCDC171-207ENST00000478913 PAX2Q02962 417 aa3.69□□□□□ -1.82
CCDC171-207ENST00000478913 ZNF33BQ06732 778 aa3.69□□□□□ -1.82
CCDC171-207ENST00000478913 CCDC40Q4G0X9 1142 aa3.69□□□□□ -1.82
CCDC171-207ENST00000478913 HSP90B2PQ58FF3 399 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms