RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 C5orf67F2Z3F1 127 aa13.04□□□□□ -0.32
NPHP4-208ENST00000478423 NRG2O14511 850 aaPredicted RBP13.04□□□□□ -0.32
NPHP4-208ENST00000478423 SC5DO75845 299 aa13.04□□□□□ -0.32
NPHP4-208ENST00000478423 AKR1C2P52895 323 aa13.04□□□□□ -0.32
NPHP4-208ENST00000478423 ALKBH1Q13686 389 aaKnown RBP13.04□□□□□ -0.32
NPHP4-208ENST00000478423 METAP1DQ6UB28 335 aaPredicted RBP13.04□□□□□ -0.32
NPHP4-208ENST00000478423 FAM86C1Q9NVL1 165 aa13.04□□□□□ -0.32
NPHP4-208ENST00000478423 REV1Q9UBZ9 1251 aa13.04□□□□□ -0.32
NPHP4-208ENST00000478423 DVL2O14641 736 aa13.03□□□□□ -0.32
NPHP4-208ENST00000478423 DSCR3O14972 297 aa13.03□□□□□ -0.32
NPHP4-208ENST00000478423 PIAS2O75928 621 aa13.03□□□□□ -0.32
NPHP4-208ENST00000478423 TFP02787 698 aa13.03□□□□□ -0.32
NPHP4-208ENST00000478423 PIPP12273 146 aaPredicted RBP13.03□□□□□ -0.32
NPHP4-208ENST00000478423 HOXB3P14651 431 aaPredicted RBP13.03□□□□□ -0.32
NPHP4-208ENST00000478423 IFNGR1P15260 489 aa13.03□□□□□ -0.32
NPHP4-208ENST00000478423 SERPINA2P20848 420 aa13.03□□□□□ -0.32
NPHP4-208ENST00000478423 CARD18P57730 90 aa13.03□□□□□ -0.32
NPHP4-208ENST00000478423 FGL1Q08830 312 aa13.03□□□□□ -0.32
NPHP4-208ENST00000478423 MFAP5Q13361 173 aa13.03□□□□□ -0.32
NPHP4-208ENST00000478423 FAM76BQ5HYJ3 339 aa13.03□□□□□ -0.32
NPHP4-208ENST00000478423 ARSKQ6UWY0 536 aa13.03□□□□□ -0.32
NPHP4-208ENST00000478423 NCCRP1Q6ZVX7 275 aaPredicted RBP13.03□□□□□ -0.32
NPHP4-208ENST00000478423 NT5CQ8TCD5 201 aa13.03□□□□□ -0.32
NPHP4-208ENST00000478423 ZNF845Q96IR2 970 aaPredicted RBP13.03□□□□□ -0.32
NPHP4-208ENST00000478423 FER1L6-AS2Q96M78 137 aa13.03□□□□□ -0.32
NPHP4-208ENST00000478423 NECAB3Q96P71 396 aaPredicted RBP13.03□□□□□ -0.32
NPHP4-208ENST00000478423 CDCA4Q9BXL8 241 aa13.03□□□□□ -0.32
NPHP4-208ENST00000478423 KCNIP1Q9NZI2 227 aa13.03□□□□□ -0.32
NPHP4-208ENST00000478423 UBQLN2Q9UHD9 624 aa13.03□□□□□ -0.32
NPHP4-208ENST00000478423 BORCS7-ASMTA0A0B4J1R7 106 aa13.03□□□□□ -0.32
NPHP4-208ENST00000478423 ARPC5O15511 151 aa13.03□□□□□ -0.32
NPHP4-208ENST00000478423 DNAJB6O75190 326 aa13.03□□□□□ -0.32
NPHP4-208ENST00000478423 GPR85P60893 370 aa13.03□□□□□ -0.32
NPHP4-208ENST00000478423 FZD2Q14332 565 aa13.03□□□□□ -0.32
NPHP4-208ENST00000478423 RAB11FIP2Q7L804 512 aa13.03□□□□□ -0.32
NPHP4-208ENST00000478423 TMEM99Q8N816 258 aa13.03□□□□□ -0.32
NPHP4-208ENST00000478423 NRTNQ99748 197 aa13.03□□□□□ -0.32
NPHP4-208ENST00000478423 PIGQQ9BRB3 760 aa13.03□□□□□ -0.32
NPHP4-208ENST00000478423 C7orf50Q9BRJ6 194 aaKnown RBP13.03□□□□□ -0.32
NPHP4-208ENST00000478423 CASP8AP2Q9UKL3 1982 aa13.03□□□□□ -0.32
NPHP4-208ENST00000478423 ANKRD30BLA7E2S9 258 aa13.03□□□□□ -0.32
NPHP4-208ENST00000478423 PRAF2O60831 178 aa13.03□□□□□ -0.32
NPHP4-208ENST00000478423 ICOSLGO75144 302 aa13.03□□□□□ -0.32
NPHP4-208ENST00000478423 HOXB9P17482 250 aaPredicted RBP13.03□□□□□ -0.32
NPHP4-208ENST00000478423 SLC35D3Q5M8T2 416 aa13.03□□□□□ -0.32
NPHP4-208ENST00000478423 PXKQ7Z7A4 578 aa13.03□□□□□ -0.32
NPHP4-208ENST00000478423 OR5D18Q8NGL1 313 aa13.03□□□□□ -0.32
NPHP4-208ENST00000478423 OR5M1Q8NGP8 315 aa13.03□□□□□ -0.32
NPHP4-208ENST00000478423 COA3Q9Y2R0 106 aaPredicted RBP13.03□□□□□ -0.32
NPHP4-208ENST00000478423 TP53P04637 393 aaPredicted RBP13.03□□□□□ -0.32
NPHP4-208ENST00000478423 CHRNB1P11230 501 aa13.03□□□□□ -0.32
NPHP4-208ENST00000478423 RPL27P61353 136 aaKnown RBP13.03□□□□□ -0.32
NPHP4-208ENST00000478423 WDR34Q96EX3 536 aa13.03□□□□□ -0.32
NPHP4-208ENST00000478423 ELMOD3Q96FG2 381 aa13.03□□□□□ -0.32
NPHP4-208ENST00000478423 SORCS2Q96PQ0 1159 aa13.03□□□□□ -0.32
NPHP4-208ENST00000478423 OR2A5Q96R48 311 aa13.03□□□□□ -0.32
NPHP4-208ENST00000478423 PHB2Q99623 299 aa13.03□□□□□ -0.32
NPHP4-208ENST00000478423 PAHP00439 452 aa13.02□□□□□ -0.32
NPHP4-208ENST00000478423 CNN3Q15417 329 aaKnown RBP13.02□□□□□ -0.32
NPHP4-208ENST00000478423 TMEM53Q6P2H8 277 aa13.02□□□□□ -0.32
NPHP4-208ENST00000478423 PRSS41Q7RTY9 318 aa13.02□□□□□ -0.32
NPHP4-208ENST00000478423 MKXQ8IYA7 352 aa13.02□□□□□ -0.32
NPHP4-208ENST00000478423 SLC25A43Q8WUT9 341 aaPredicted RBP13.02□□□□□ -0.32
NPHP4-208ENST00000478423 RRNAD1Q96FB5 475 aaKnown RBP13.02□□□□□ -0.32
NPHP4-208ENST00000478423 GABRG3Q99928 467 aa13.02□□□□□ -0.32
NPHP4-208ENST00000478423 ZNF226Q9NYT6 803 aa13.02□□□□□ -0.32
NPHP4-208ENST00000478423 YARS2Q9Y2Z4 477 aaKnown RBP13.02□□□□□ -0.32
NPHP4-208ENST00000478423 P2RX6O15547 441 aa13.02□□□□□ -0.33
NPHP4-208ENST00000478423 GCH1P30793 250 aa13.02□□□□□ -0.33
NPHP4-208ENST00000478423 RRADP55042 308 aa13.02□□□□□ -0.33
NPHP4-208ENST00000478423 MESP2Q0VG99 397 aa13.02□□□□□ -0.33
NPHP4-208ENST00000478423 ACKR1Q16570 336 aa13.02□□□□□ -0.33
NPHP4-208ENST00000478423 TMEM71Q6P5X7 295 aa13.02□□□□□ -0.33
NPHP4-208ENST00000478423 APOOLQ6UXV4 268 aa13.02□□□□□ -0.33
NPHP4-208ENST00000478423 RNF165Q6ZSG1 346 aa13.02□□□□□ -0.33
NPHP4-208ENST00000478423 VASH1Q7L8A9 365 aaPredicted RBP13.02□□□□□ -0.33
NPHP4-208ENST00000478423 FAM83FQ8NEG4 500 aaPredicted RBP13.02□□□□□ -0.33
NPHP4-208ENST00000478423 OR4N2Q8NGD1 307 aa13.02□□□□□ -0.33
NPHP4-208ENST00000478423 TSSK2Q96PF2 358 aa13.02□□□□□ -0.33
NPHP4-208ENST00000478423 NOX3Q9HBY0 568 aa13.02□□□□□ -0.33
NPHP4-208ENST00000478423 MAN2C1Q9NTJ4 1040 aa13.02□□□□□ -0.33
NPHP4-208ENST00000478423 TAS2R3Q9NYW6 316 aa13.02□□□□□ -0.33
NPHP4-208ENST00000478423 SH3BGRL2Q9UJC5 107 aa13.02□□□□□ -0.33
NPHP4-208ENST00000478423 OSGIN1Q9UJX0 560 aa13.02□□□□□ -0.33
NPHP4-208ENST00000478423 NOSIPQ9Y314 301 aaKnown RBP13.02□□□□□ -0.33
NPHP4-208ENST00000478423 PLXNB2O15031 1838 aa13.02□□□□□ -0.33
NPHP4-208ENST00000478423 P2RY10O00398 339 aa13.02□□□□□ -0.33
NPHP4-208ENST00000478423 GOSR2O14653 212 aa13.02□□□□□ -0.33
NPHP4-208ENST00000478423 ZGLP1P0C6A0 271 aa13.02□□□□□ -0.33
NPHP4-208ENST00000478423 SLC2A1P11166 492 aa13.02□□□□□ -0.33
NPHP4-208ENST00000478423 MRPL19P49406 292 aaKnown RBP13.02□□□□□ -0.33
NPHP4-208ENST00000478423 SF3B4Q15427 424 aaKnown RBP eCLIP13.02□□□□□ -0.335e-8■■■■□ 21.4
NPHP4-208ENST00000478423 KIRREL2Q6UWL6 708 aa13.02□□□□□ -0.33
NPHP4-208ENST00000478423 SLC16A9Q7RTY1 509 aa13.02□□□□□ -0.33
NPHP4-208ENST00000478423 DCXRQ7Z4W1 244 aa13.02□□□□□ -0.33
NPHP4-208ENST00000478423 CHPT1Q8WUD6 406 aa13.02□□□□□ -0.33
NPHP4-208ENST00000478423 SNAPC3Q92966 411 aa13.02□□□□□ -0.33
NPHP4-208ENST00000478423 LRRC46Q96FV0 321 aa13.02□□□□□ -0.33
NPHP4-208ENST00000478423 SGCZQ96LD1 299 aa13.02□□□□□ -0.33
NPHP4-208ENST00000478423 K7EQS6 105 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms