RNA–Protein interactions for RNA: ENST00000477625.5

PTPN7-210, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 5

Gene PTPN7, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-210ENST00000477625 FAM107BQ9H098 131 aa10.67□□□□□ -0.7
PTPN7-210ENST00000477625 GMPR2Q9P2T1 348 aaKnown RBP10.67□□□□□ -0.7
PTPN7-210ENST00000477625 PLCE1Q9P212 2302 aa10.67□□□□□ -0.7
PTPN7-210ENST00000477625 HEATR1Q9H583 2144 aaKnown RBP10.66□□□□□ -0.7
PTPN7-210ENST00000477625 NIPBLQ6KC79 2804 aaeCLIP10.66□□□□□ -0.7
PTPN7-210ENST00000477625 FAM171A2A8MVW0 826 aa10.66□□□□□ -0.7
PTPN7-210ENST00000477625 ATP6V1G2-DDX39BF2Z307 99 aa10.66□□□□□ -0.7
PTPN7-210ENST00000477625 CXCR6O00574 342 aa10.66□□□□□ -0.7
PTPN7-210ENST00000477625 NME4O00746 187 aa10.66□□□□□ -0.7
PTPN7-210ENST00000477625 GSTA4O15217 222 aa10.66□□□□□ -0.7
PTPN7-210ENST00000477625 RNF13O43567 381 aa10.66□□□□□ -0.7
PTPN7-210ENST00000477625 SNX3O60493 162 aa10.66□□□□□ -0.7
PTPN7-210ENST00000477625 IGF2P01344 180 aa10.66□□□□□ -0.7
PTPN7-210ENST00000477625 IGKV3-15P01624 115 aa10.66□□□□□ -0.7
PTPN7-210ENST00000477625 IGLV1-44P01699 117 aa10.66□□□□□ -0.7
PTPN7-210ENST00000477625 CRYAAP02489 173 aa10.66□□□□□ -0.7
PTPN7-210ENST00000477625 UMPSP11172 480 aa10.66□□□□□ -0.7
PTPN7-210ENST00000477625 CBR1P16152 277 aa10.66□□□□□ -0.7
PTPN7-210ENST00000477625 FUT1P19526 365 aa10.66□□□□□ -0.7
PTPN7-210ENST00000477625 DRD4P21917 467 aa10.66□□□□□ -0.7
PTPN7-210ENST00000477625 APOBEC3AP31941 199 aaPredicted RBP10.66□□□□□ -0.7
PTPN7-210ENST00000477625 NUDT2P50583 147 aa10.66□□□□□ -0.7
PTPN7-210ENST00000477625 UGT2B15P54855 530 aa10.66□□□□□ -0.7
PTPN7-210ENST00000477625 BIDP55957 195 aa10.66□□□□□ -0.7
PTPN7-210ENST00000477625 CLEC12BQ2HXU8 276 aa10.66□□□□□ -0.7
PTPN7-210ENST00000477625 C11orf71Q6IPW1 123 aa10.66□□□□□ -0.7
PTPN7-210ENST00000477625 CLEC9AQ6UXN8 241 aa10.66□□□□□ -0.7
PTPN7-210ENST00000477625 SLC35D2Q76EJ3 337 aa10.66□□□□□ -0.7
PTPN7-210ENST00000477625 ZNF627Q7L945 461 aa10.66□□□□□ -0.7
PTPN7-210ENST00000477625 SLC46A3Q7Z3Q1 461 aa10.66□□□□□ -0.7
PTPN7-210ENST00000477625 PFN4Q8NHR9 129 aa10.66□□□□□ -0.7
PTPN7-210ENST00000477625 TMEM255BQ8WV15 326 aa10.66□□□□□ -0.7
PTPN7-210ENST00000477625 TMEM239Q8WW34 195 aa10.66□□□□□ -0.7
PTPN7-210ENST00000477625 KCNS3Q9BQ31 491 aa10.66□□□□□ -0.7
PTPN7-210ENST00000477625 NSRP1Q9H0G5 558 aaKnown RBP10.66□□□□□ -0.7
PTPN7-210ENST00000477625 POFUT2Q9Y2G5 429 aa10.66□□□□□ -0.7
PTPN7-210ENST00000477625 BLOC1S5-TXNDC5H3BN57 136 aa10.65□□□□□ -0.7
PTPN7-210ENST00000477625 SMAD7O15105 426 aaKnown RBP10.65□□□□□ -0.7
PTPN7-210ENST00000477625 NDUFS7O75251 213 aa10.65□□□□□ -0.7
PTPN7-210ENST00000477625 OR7A10O76100 309 aa10.65□□□□□ -0.7
PTPN7-210ENST00000477625 IGHV4-39P01824 125 aa10.65□□□□□ -0.7
PTPN7-210ENST00000477625 CECR9P0C854 216 aa10.65□□□□□ -0.7
PTPN7-210ENST00000477625 BMP4P12644 408 aa10.65□□□□□ -0.7
PTPN7-210ENST00000477625 PRDX6P30041 224 aa10.65□□□□□ -0.7
PTPN7-210ENST00000477625 IFNA8P32881 189 aa10.65□□□□□ -0.7
PTPN7-210ENST00000477625 ARR3P36575 388 aa10.65□□□□□ -0.7
PTPN7-210ENST00000477625 CSNK1A1P48729 337 aa10.65□□□□□ -0.7
PTPN7-210ENST00000477625 GSK3BP49841 420 aa10.65□□□□□ -0.7
PTPN7-210ENST00000477625 PSME3P61289 254 aa10.65□□□□□ -0.7
PTPN7-210ENST00000477625 NAAAQ02083 359 aa10.65□□□□□ -0.7
PTPN7-210ENST00000477625 ST3GAL3Q11203 375 aa10.65□□□□□ -0.7
PTPN7-210ENST00000477625 TNK1Q13470 666 aa10.65□□□□□ -0.7
PTPN7-210ENST00000477625 NANOGNBQ7Z5D8 188 aa10.65□□□□□ -0.7
PTPN7-210ENST00000477625 VTCN1Q7Z7D3 282 aa10.65□□□□□ -0.7
PTPN7-210ENST00000477625 LIPHQ8WWY8 451 aa10.65□□□□□ -0.7
PTPN7-210ENST00000477625 TMEM54Q969K7 222 aa10.65□□□□□ -0.7
PTPN7-210ENST00000477625 ZNF566Q969W8 418 aa10.65□□□□□ -0.7
PTPN7-210ENST00000477625 SGTBQ96EQ0 304 aa10.65□□□□□ -0.7
PTPN7-210ENST00000477625 SLC25A44Q96H78 314 aaPredicted RBP10.65□□□□□ -0.7
PTPN7-210ENST00000477625 PRRC1Q96M27 445 aa10.65□□□□□ -0.7
PTPN7-210ENST00000477625 CACNG6Q9BXT2 260 aa10.65□□□□□ -0.7
PTPN7-210ENST00000477625 ULBP2Q9BZM5 246 aa10.65□□□□□ -0.7
PTPN7-210ENST00000477625 BARX1Q9HBU1 254 aaPredicted RBP10.65□□□□□ -0.7
PTPN7-210ENST00000477625 C20orf141Q9NUB4 165 aa10.65□□□□□ -0.7
PTPN7-210ENST00000477625 GDF2Q9UK05 429 aaPredicted RBP10.65□□□□□ -0.7
PTPN7-210ENST00000477625 A4GNTQ9UNA3 340 aa10.65□□□□□ -0.7
PTPN7-210ENST00000477625 MED31Q9Y3C7 131 aa10.65□□□□□ -0.7
PTPN7-210ENST00000477625 HTR3EA5X5Y0 456 aa10.64□□□□□ -0.71
PTPN7-210ENST00000477625 ZNF503-AS2A6NEH8 195 aa10.64□□□□□ -0.71
PTPN7-210ENST00000477625 SEC14L2O76054 403 aa10.64□□□□□ -0.71
PTPN7-210ENST00000477625 ZNF682O95780 498 aa10.64□□□□□ -0.71
PTPN7-210ENST00000477625 LY6G6DO95868 133 aa10.64□□□□□ -0.71
PTPN7-210ENST00000477625 BCL10O95999 233 aa10.64□□□□□ -0.71
PTPN7-210ENST00000477625 IFNW1P05000 195 aa10.64□□□□□ -0.71
PTPN7-210ENST00000477625 ACVR1BP36896 505 aa10.64□□□□□ -0.71
PTPN7-210ENST00000477625 YAP1P46937 504 aaKnown RBP10.64□□□□□ -0.71
PTPN7-210ENST00000477625 CAPZA2P47755 286 aa10.64□□□□□ -0.71
PTPN7-210ENST00000477625 GYS2P54840 703 aa10.64□□□□□ -0.71
PTPN7-210ENST00000477625 CHRNB3Q05901 458 aa10.64□□□□□ -0.71
PTPN7-210ENST00000477625 RPL18Q07020 188 aaKnown RBP10.64□□□□□ -0.71
PTPN7-210ENST00000477625 RAB35Q15286 201 aa10.64□□□□□ -0.71
PTPN7-210ENST00000477625 LRFN4Q6PJG9 635 aa10.64□□□□□ -0.71
PTPN7-210ENST00000477625 ZNF813Q6ZN06 617 aa10.64□□□□□ -0.71
PTPN7-210ENST00000477625 Q71RC1 249 aaPredicted RBP10.64□□□□□ -0.71
PTPN7-210ENST00000477625 FKBP9P1Q75LS8 142 aa10.64□□□□□ -0.71
PTPN7-210ENST00000477625 CBLL1Q75N03 491 aa10.64□□□□□ -0.71
PTPN7-210ENST00000477625 MDP1Q86V88 176 aa10.64□□□□□ -0.71
PTPN7-210ENST00000477625 IL17RDQ8NFM7 739 aa10.64□□□□□ -0.71
PTPN7-210ENST00000477625 FOXB1Q99853 325 aa10.64□□□□□ -0.71
PTPN7-210ENST00000477625 KCTD14Q9BQ13 255 aaPredicted RBP10.64□□□□□ -0.71
PTPN7-210ENST00000477625 CA10Q9NS85 328 aa10.64□□□□□ -0.71
PTPN7-210ENST00000477625 B3GNT2Q9NY97 397 aa10.64□□□□□ -0.71
PTPN7-210ENST00000477625 GLTPQ9NZD2 209 aa10.64□□□□□ -0.71
PTPN7-210ENST00000477625 ABCD2Q9UBJ2 740 aa10.64□□□□□ -0.71
PTPN7-210ENST00000477625 SNX13Q9Y5W8 968 aa10.64□□□□□ -0.71
PTPN7-210ENST00000477625 A0A1W2PRG6 482 aa10.63□□□□□ -0.71
PTPN7-210ENST00000477625 H7C417 338 aa10.63□□□□□ -0.71
PTPN7-210ENST00000477625 FFAR1O14842 300 aa10.63□□□□□ -0.71
PTPN7-210ENST00000477625 SSX4O60224 188 aa10.63□□□□□ -0.71
PTPN7-210ENST00000477625 SERPINA1P01009 418 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms