RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 CEACAM4O75871 244 aa12.93□□□□□ -0.34
COL4A6-206ENST00000477085 GPANK1O95872 356 aa12.93□□□□□ -0.34
COL4A6-206ENST00000477085 HPNP05981 417 aa12.93□□□□□ -0.34
COL4A6-206ENST00000477085 ATP6V1E1P36543 226 aa12.93□□□□□ -0.34
COL4A6-206ENST00000477085 MAGEA5P43359 124 aa12.93□□□□□ -0.34
COL4A6-206ENST00000477085 CD97P48960 835 aa12.93□□□□□ -0.34
COL4A6-206ENST00000477085 MEOX1P50221 254 aa12.93□□□□□ -0.34
COL4A6-206ENST00000477085 TNFSF10P50591 281 aa12.93□□□□□ -0.34
COL4A6-206ENST00000477085 SUCLG1P53597 346 aaKnown RBP12.93□□□□□ -0.34
COL4A6-206ENST00000477085 ARG2P78540 354 aa12.93□□□□□ -0.34
COL4A6-206ENST00000477085 GGTLC2Q14390 218 aa12.93□□□□□ -0.34
COL4A6-206ENST00000477085 PON3Q15166 354 aa12.93□□□□□ -0.34
COL4A6-206ENST00000477085 SSX1Q16384 188 aa12.93□□□□□ -0.34
COL4A6-206ENST00000477085 CTF1Q16619 201 aa12.93□□□□□ -0.34
COL4A6-206ENST00000477085 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.93□□□□□ -0.34
COL4A6-206ENST00000477085 ANKRD13BQ86YJ7 626 aa12.93□□□□□ -0.34
COL4A6-206ENST00000477085 TMEM251Q8N6I4 163 aa12.93□□□□□ -0.34
COL4A6-206ENST00000477085 ADPRHL1Q8NDY3 354 aa12.93□□□□□ -0.34
COL4A6-206ENST00000477085 ZNF420Q8TAQ5 688 aaPredicted RBP12.93□□□□□ -0.34
COL4A6-206ENST00000477085 ASB10Q8WXI3 467 aa12.93□□□□□ -0.34
COL4A6-206ENST00000477085 GATAD2BQ8WXI9 593 aa12.93□□□□□ -0.34
COL4A6-206ENST00000477085 TBX5Q99593 518 aa12.93□□□□□ -0.34
COL4A6-206ENST00000477085 MND1Q9BWT6 205 aa12.93□□□□□ -0.34
COL4A6-206ENST00000477085 MFRPQ9BY79 579 aa12.93□□□□□ -0.34
COL4A6-206ENST00000477085 SRXN1Q9BYN0 137 aa12.93□□□□□ -0.34
COL4A6-206ENST00000477085 NDEL1Q9GZM8 345 aa12.93□□□□□ -0.34
COL4A6-206ENST00000477085 NUAK2Q9H093 628 aa12.93□□□□□ -0.34
COL4A6-206ENST00000477085 EXOSC1Q9Y3B2 195 aaKnown RBP12.93□□□□□ -0.34
COL4A6-206ENST00000477085 SPTBN2O15020 2390 aa12.93□□□□□ -0.34
COL4A6-206ENST00000477085 IGHV3-15A0A0B4J1V0 119 aa12.92□□□□□ -0.34
COL4A6-206ENST00000477085 A0A1W2PRG6 482 aa12.92□□□□□ -0.34
COL4A6-206ENST00000477085 TMEM129A0AVI4 362 aa12.92□□□□□ -0.34
COL4A6-206ENST00000477085 PRSS37A4D1T9 235 aa12.92□□□□□ -0.34
COL4A6-206ENST00000477085 TRIM64BA6NI03 449 aa12.92□□□□□ -0.34
COL4A6-206ENST00000477085 AQP7P3A6NL99 342 aa12.92□□□□□ -0.34
COL4A6-206ENST00000477085 C12orf71A8MTZ7 269 aa12.92□□□□□ -0.34
COL4A6-206ENST00000477085 ZNF701M0R085 212 aaPredicted RBP12.92□□□□□ -0.34
COL4A6-206ENST00000477085 GLCEO94923 617 aa12.92□□□□□ -0.34
COL4A6-206ENST00000477085 LALBAP00709 142 aa12.92□□□□□ -0.34
COL4A6-206ENST00000477085 CD36P16671 472 aa12.92□□□□□ -0.34
COL4A6-206ENST00000477085 MYL12AP19105 171 aa12.92□□□□□ -0.34
COL4A6-206ENST00000477085 SDHBP21912 280 aa12.92□□□□□ -0.34
COL4A6-206ENST00000477085 RGS6P49758 472 aa12.92□□□□□ -0.34
COL4A6-206ENST00000477085 TMBIM6P55061 237 aa12.92□□□□□ -0.34
COL4A6-206ENST00000477085 SLC35A1P78382 337 aa12.92□□□□□ -0.34
COL4A6-206ENST00000477085 POU3F1Q03052 451 aaPredicted RBP12.92□□□□□ -0.34
COL4A6-206ENST00000477085 ZNF85Q03923 595 aa12.92□□□□□ -0.34
COL4A6-206ENST00000477085 AQP6Q13520 282 aa12.92□□□□□ -0.34
COL4A6-206ENST00000477085 ETFDHQ16134 617 aa12.92□□□□□ -0.34
COL4A6-206ENST00000477085 ZNF766Q5HY98 468 aa12.92□□□□□ -0.34
COL4A6-206ENST00000477085 RNFT1Q5M7Z0 435 aa12.92□□□□□ -0.34
COL4A6-206ENST00000477085 SLC35D3Q5M8T2 416 aa12.92□□□□□ -0.34
COL4A6-206ENST00000477085 EEF1A1P5Q5VTE0 462 aa12.92□□□□□ -0.34
COL4A6-206ENST00000477085 SLC35D2Q76EJ3 337 aa12.92□□□□□ -0.34
COL4A6-206ENST00000477085 SSX6Q7RTT6 188 aa12.92□□□□□ -0.34
COL4A6-206ENST00000477085 ACBD7Q8N6N7 88 aa12.92□□□□□ -0.34
COL4A6-206ENST00000477085 ZNF511Q8NB15 262 aa12.92□□□□□ -0.34
COL4A6-206ENST00000477085 RPL3LQ92901 407 aaKnown RBP12.92□□□□□ -0.34
COL4A6-206ENST00000477085 ADGRG7Q96K78 797 aa12.92□□□□□ -0.34
COL4A6-206ENST00000477085 KLHL15Q96M94 604 aa12.92□□□□□ -0.34
COL4A6-206ENST00000477085 SFXN2Q96NB2 322 aa12.92□□□□□ -0.34
COL4A6-206ENST00000477085 UCN2Q96RP3 112 aa12.92□□□□□ -0.34
COL4A6-206ENST00000477085 ALG12Q9BV10 488 aa12.92□□□□□ -0.34
COL4A6-206ENST00000477085 EMC6Q9BV81 110 aa12.92□□□□□ -0.34
COL4A6-206ENST00000477085 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.92□□□□□ -0.34
COL4A6-206ENST00000477085 ISG20L2Q9H9L3 353 aaKnown RBP12.92□□□□□ -0.34
COL4A6-206ENST00000477085 VSX1Q9NZR4 365 aaPredicted RBP12.92□□□□□ -0.34
COL4A6-206ENST00000477085 ENPP5Q9UJA9 477 aa12.92□□□□□ -0.34
COL4A6-206ENST00000477085 KLF13Q9Y2Y9 288 aaPredicted RBP12.92□□□□□ -0.34
COL4A6-206ENST00000477085 SPENQ96T58 3664 aaKnown RBP12.92□□□□□ -0.34
COL4A6-206ENST00000477085 CNTRLQ7Z7A1 2325 aa12.92□□□□□ -0.34
COL4A6-206ENST00000477085 DMXL2Q8TDJ6 3036 aa12.92□□□□□ -0.34
COL4A6-206ENST00000477085 A0A1W2PQL4 384 aaPredicted RBP12.92□□□□□ -0.34
COL4A6-206ENST00000477085 SLC22A23A1A5C7 686 aa12.92□□□□□ -0.34
COL4A6-206ENST00000477085 NPIPB13A6NJU9 1138 aa12.92□□□□□ -0.34
COL4A6-206ENST00000477085 NPIPB4C9JG80 1138 aa12.92□□□□□ -0.34
COL4A6-206ENST00000477085 SELENOFO60613 162 aa12.92□□□□□ -0.34
COL4A6-206ENST00000477085 SLC34A2O95436 690 aa12.92□□□□□ -0.34
COL4A6-206ENST00000477085 CD46P15529 392 aa12.92□□□□□ -0.34
COL4A6-206ENST00000477085 TSTQ16762 297 aaKnown RBP12.92□□□□□ -0.34
COL4A6-206ENST00000477085 HYAL4Q2M3T9 481 aa12.92□□□□□ -0.34
COL4A6-206ENST00000477085 C19orf48Q6RUI8 117 aa12.92□□□□□ -0.34
COL4A6-206ENST00000477085 ADCK1Q86TW2 530 aa12.92□□□□□ -0.34
COL4A6-206ENST00000477085 ATCAYQ86WG3 371 aa12.92□□□□□ -0.34
COL4A6-206ENST00000477085 ZFP62Q8NB50 900 aaPredicted RBP12.92□□□□□ -0.34
COL4A6-206ENST00000477085 ZNF248Q8NDW4 579 aa12.92□□□□□ -0.34
COL4A6-206ENST00000477085 OR10H4Q8NGA5 316 aa12.92□□□□□ -0.34
COL4A6-206ENST00000477085 OR6K6Q8NGW6 343 aa12.92□□□□□ -0.34
COL4A6-206ENST00000477085 B9D1Q9UPM9 204 aa12.92□□□□□ -0.34
COL4A6-206ENST00000477085 ALPK2Q86TB3 2170 aa12.91□□□□□ -0.34
COL4A6-206ENST00000477085 M0R3G1 203 aa12.91□□□□□ -0.34
COL4A6-206ENST00000477085 MYL12BO14950 172 aa12.91□□□□□ -0.34
COL4A6-206ENST00000477085 LRRTM2O43300 516 aa12.91□□□□□ -0.34
COL4A6-206ENST00000477085 TRAF3IP2O43734 574 aaPredicted RBP12.91□□□□□ -0.34
COL4A6-206ENST00000477085 SCG5P05408 212 aa12.91□□□□□ -0.34
COL4A6-206ENST00000477085 PSKH1P11801 424 aa12.91□□□□□ -0.34
COL4A6-206ENST00000477085 ENPP1P22413 925 aa12.91□□□□□ -0.34
COL4A6-206ENST00000477085 NAA10P41227 235 aaPredicted RBP12.91□□□□□ -0.34
COL4A6-206ENST00000477085 WNT4P56705 351 aa12.91□□□□□ -0.34
COL4A6-206ENST00000477085 OTPQ5XKR4 325 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms