RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 GCNT6Q5T4J0 391 aa11.27□□□□□ -0.61
MRPL55-228ENST00000476267 SWT1Q5T5J6 900 aaKnown RBP11.27□□□□□ -0.61
MRPL55-228ENST00000476267 LIPNQ5VXI9 398 aa11.27□□□□□ -0.61
MRPL55-228ENST00000476267 CARD17Q5XLA6 110 aa11.27□□□□□ -0.61
MRPL55-228ENST00000476267 REEP3Q6NUK4 255 aa11.27□□□□□ -0.61
MRPL55-228ENST00000476267 ZNF813Q6ZN06 617 aa11.27□□□□□ -0.61
MRPL55-228ENST00000476267 DEF8Q6ZN54 512 aa11.27□□□□□ -0.61
MRPL55-228ENST00000476267 PXKQ7Z7A4 578 aa11.27□□□□□ -0.61
MRPL55-228ENST00000476267 LRP11Q86VZ4 500 aa11.27□□□□□ -0.61
MRPL55-228ENST00000476267 MEX3DQ86XN8 651 aaKnown RBP11.27□□□□□ -0.61
MRPL55-228ENST00000476267 TMEM43Q9BTV4 400 aa11.27□□□□□ -0.61
MRPL55-228ENST00000476267 DENND2DQ9H6A0 471 aaPredicted RBP11.27□□□□□ -0.61
MRPL55-228ENST00000476267 MYEF2Q9P2K5 600 aaKnown RBP11.27□□□□□ -0.61
MRPL55-228ENST00000476267 NOX1Q9Y5S8 564 aa11.27□□□□□ -0.61
MRPL55-228ENST00000476267 M0R233 179 aa11.26□□□□□ -0.61
MRPL55-228ENST00000476267 PLPP3O14495 311 aa11.26□□□□□ -0.61
MRPL55-228ENST00000476267 HPXP02790 462 aa11.26□□□□□ -0.61
MRPL55-228ENST00000476267 CD79AP11912 226 aa11.26□□□□□ -0.61
MRPL55-228ENST00000476267 NQO1P15559 274 aaKnown RBP11.26□□□□□ -0.61
MRPL55-228ENST00000476267 COL8A2P25067 703 aa11.26□□□□□ -0.61
MRPL55-228ENST00000476267 CDH12P55289 794 aa11.26□□□□□ -0.61
MRPL55-228ENST00000476267 MAGOHP61326 146 aaKnown RBP11.26□□□□□ -0.61
MRPL55-228ENST00000476267 IL1RL1Q01638 556 aa11.26□□□□□ -0.61
MRPL55-228ENST00000476267 PIGFQ07326 219 aa11.26□□□□□ -0.61
MRPL55-228ENST00000476267 CAMK2DQ13557 499 aa11.26□□□□□ -0.61
MRPL55-228ENST00000476267 UGT2A3Q6UWM9 527 aa11.26□□□□□ -0.61
MRPL55-228ENST00000476267 WDR88Q6ZMY6 472 aa11.26□□□□□ -0.61
MRPL55-228ENST00000476267 CARM1Q86X55 608 aa11.26□□□□□ -0.61
MRPL55-228ENST00000476267 FGFBP3Q8TAT2 258 aa11.26□□□□□ -0.61
MRPL55-228ENST00000476267 EPYCQ99645 322 aa11.26□□□□□ -0.61
MRPL55-228ENST00000476267 FOXB1Q99853 325 aa11.26□□□□□ -0.61
MRPL55-228ENST00000476267 EBF4Q9BQW3 602 aa11.26□□□□□ -0.61
MRPL55-228ENST00000476267 SPATA5L1Q9BVQ7 753 aa11.26□□□□□ -0.61
MRPL55-228ENST00000476267 REV1Q9UBZ9 1251 aa11.26□□□□□ -0.61
MRPL55-228ENST00000476267 NBEAL1Q6ZS30 2694 aa11.25□□□□□ -0.61
MRPL55-228ENST00000476267 WNT9BO14905 357 aa11.25□□□□□ -0.61
MRPL55-228ENST00000476267 ERLIN1O75477 346 aa11.25□□□□□ -0.61
MRPL55-228ENST00000476267 RP2O75695 350 aa11.25□□□□□ -0.61
MRPL55-228ENST00000476267 NCR1O76036 304 aa11.25□□□□□ -0.61
MRPL55-228ENST00000476267 MFN2O95140 757 aa11.25□□□□□ -0.61
MRPL55-228ENST00000476267 LYPD3O95274 346 aa11.25□□□□□ -0.61
MRPL55-228ENST00000476267 THY1P04216 161 aa11.25□□□□□ -0.61
MRPL55-228ENST00000476267 ACHEP22303 614 aa11.25□□□□□ -0.61
MRPL55-228ENST00000476267 PPIBP23284 216 aaKnown RBP11.25□□□□□ -0.61
MRPL55-228ENST00000476267 GIPRP48546 466 aa11.25□□□□□ -0.61
MRPL55-228ENST00000476267 PTDSS1P48651 473 aaKnown RBP11.25□□□□□ -0.61
MRPL55-228ENST00000476267 SEC24CP53992 1094 aa11.25□□□□□ -0.61
MRPL55-228ENST00000476267 PCBP3P57721 371 aaKnown RBP11.25□□□□□ -0.61
MRPL55-228ENST00000476267 RGS8P57771 180 aaPredicted RBP11.25□□□□□ -0.61
MRPL55-228ENST00000476267 RAB1AP62820 205 aa11.25□□□□□ -0.61
MRPL55-228ENST00000476267 PMS2P3Q13401 168 aa11.25□□□□□ -0.61
MRPL55-228ENST00000476267 CCNIQ14094 377 aa11.25□□□□□ -0.61
MRPL55-228ENST00000476267 SCARB2Q14108 478 aa11.25□□□□□ -0.61
MRPL55-228ENST00000476267 NPTX1Q15818 432 aa11.25□□□□□ -0.61
MRPL55-228ENST00000476267 KRT73Q86Y46 540 aa11.25□□□□□ -0.61
MRPL55-228ENST00000476267 BHLHE22Q8NFJ8 381 aaPredicted RBP11.25□□□□□ -0.61
MRPL55-228ENST00000476267 SEMA6DQ8NFY4 1073 aa11.25□□□□□ -0.61
MRPL55-228ENST00000476267 CLDND2Q8NHS1 167 aa11.25□□□□□ -0.61
MRPL55-228ENST00000476267 TMEM54Q969K7 222 aa11.25□□□□□ -0.61
MRPL55-228ENST00000476267 YIPF5Q969M3 257 aa11.25□□□□□ -0.61
MRPL55-228ENST00000476267 SPDL1Q96EA4 605 aa11.25□□□□□ -0.61
MRPL55-228ENST00000476267 C7orf26Q96N11 449 aa11.25□□□□□ -0.61
MRPL55-228ENST00000476267 ARHGDIGQ99819 225 aa11.25□□□□□ -0.61
MRPL55-228ENST00000476267 SYT3Q9BQG1 590 aa11.25□□□□□ -0.61
MRPL55-228ENST00000476267 CPPED1Q9BRF8 314 aaPredicted RBP11.25□□□□□ -0.61
MRPL55-228ENST00000476267 ASPNQ9BXN1 380 aa11.25□□□□□ -0.61
MRPL55-228ENST00000476267 ULBP2Q9BZM5 246 aa11.25□□□□□ -0.61
MRPL55-228ENST00000476267 MS4A5Q9H3V2 200 aa11.25□□□□□ -0.61
MRPL55-228ENST00000476267 EVA1AQ9H8M9 152 aa11.25□□□□□ -0.61
MRPL55-228ENST00000476267 TMBIM4Q9HC24 238 aa11.25□□□□□ -0.61
MRPL55-228ENST00000476267 TCF7L2Q9NQB0 619 aa11.25□□□□□ -0.61
MRPL55-228ENST00000476267 PRORSD1PA6NEY8 169 aa11.24□□□□□ -0.61
MRPL55-228ENST00000476267 B4DSR2 109 aa11.24□□□□□ -0.61
MRPL55-228ENST00000476267 FAM157AC9JC47 383 aa11.24□□□□□ -0.61
MRPL55-228ENST00000476267 HAX1O00165 279 aa11.24□□□□□ -0.61
MRPL55-228ENST00000476267 FMO6PO60774 539 aa11.24□□□□□ -0.61
MRPL55-228ENST00000476267 UBL3O95164 117 aa11.24□□□□□ -0.61
MRPL55-228ENST00000476267 TGDSO95455 350 aa11.24□□□□□ -0.61
MRPL55-228ENST00000476267 MT-ATP6P00846 226 aa11.24□□□□□ -0.61
MRPL55-228ENST00000476267 ALDH3B1P43353 468 aa11.24□□□□□ -0.61
MRPL55-228ENST00000476267 IDH3AP50213 366 aa11.24□□□□□ -0.61
MRPL55-228ENST00000476267 NCALDP61601 193 aa11.24□□□□□ -0.61
MRPL55-228ENST00000476267 MRPS11P82912 194 aaKnown RBP11.24□□□□□ -0.61
MRPL55-228ENST00000476267 RAB39AQ14964 217 aa11.24□□□□□ -0.61
MRPL55-228ENST00000476267 MAD2L1BPQ15013 274 aaPredicted RBP11.24□□□□□ -0.61
MRPL55-228ENST00000476267 TRMT5Q32P41 509 aaKnown RBP11.24□□□□□ -0.61
MRPL55-228ENST00000476267 DLEU7Q6UYE1 221 aa11.24□□□□□ -0.61
MRPL55-228ENST00000476267 RINLQ6ZS11 566 aa11.24□□□□□ -0.61
MRPL55-228ENST00000476267 PIWIL3Q7Z3Z3 882 aaKnown RBP11.24□□□□□ -0.61
MRPL55-228ENST00000476267 TSPYL5Q86VY4 417 aaPredicted RBP11.24□□□□□ -0.61
MRPL55-228ENST00000476267 PTOV1Q86YD1 416 aa11.24□□□□□ -0.61
MRPL55-228ENST00000476267 SKA3Q8IX90 412 aa11.24□□□□□ -0.61
MRPL55-228ENST00000476267 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.24□□□□□ -0.61
MRPL55-228ENST00000476267 OR5J2Q8NH18 312 aa11.24□□□□□ -0.61
MRPL55-228ENST00000476267 RDH5Q92781 318 aa11.24□□□□□ -0.61
MRPL55-228ENST00000476267 ZNF426Q9BUY5 554 aa11.24□□□□□ -0.61
MRPL55-228ENST00000476267 TMEM27Q9HBJ8 222 aa11.24□□□□□ -0.61
MRPL55-228ENST00000476267 B3GAT2Q9NPZ5 323 aa11.24□□□□□ -0.61
MRPL55-228ENST00000476267 NKIRAS1Q9NYS0 192 aa11.24□□□□□ -0.61
MRPL55-228ENST00000476267 TAS2R5Q9NYW4 299 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms