RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 NDUFA6P56556 154 aa10.68□□□□□ -0.7
U2AF1-209ENST00000475639 SIGLEC14Q08ET2 396 aa10.68□□□□□ -0.7
U2AF1-209ENST00000475639 NXPE4Q6UWF7 544 aa10.68□□□□□ -0.7
U2AF1-209ENST00000475639 PLXDC1Q8IUK5 500 aa10.68□□□□□ -0.7
U2AF1-209ENST00000475639 HSD17B8Q92506 261 aa10.68□□□□□ -0.7
U2AF1-209ENST00000475639 PSMF1Q92530 271 aa10.68□□□□□ -0.7
U2AF1-209ENST00000475639 FAM46AQ96IP4 442 aaKnown RBP10.68□□□□□ -0.7
U2AF1-209ENST00000475639 SAMD8Q96LT4 415 aa10.68□□□□□ -0.7
U2AF1-209ENST00000475639 PRRC1Q96M27 445 aa10.68□□□□□ -0.7
U2AF1-209ENST00000475639 TMEM59Q9BXS4 323 aa10.68□□□□□ -0.7
U2AF1-209ENST00000475639 NOX3Q9HBY0 568 aa10.68□□□□□ -0.7
U2AF1-209ENST00000475639 MYEF2Q9P2K5 600 aaKnown RBP10.68□□□□□ -0.7
U2AF1-209ENST00000475639 GPR52Q9Y2T5 361 aa10.68□□□□□ -0.7
U2AF1-209ENST00000475639 MEIKINA0A087WXM9 373 aa10.68□□□□□ -0.7
U2AF1-209ENST00000475639 PEX11BO96011 259 aa10.68□□□□□ -0.7
U2AF1-209ENST00000475639 IGHA2P01877 340 aa10.68□□□□□ -0.7
U2AF1-209ENST00000475639 GSTP1P09211 210 aaKnown RBP10.68□□□□□ -0.7
U2AF1-209ENST00000475639 METTL15P1P0C7V9 234 aa10.68□□□□□ -0.7
U2AF1-209ENST00000475639 SIM1P81133 766 aaPredicted RBP10.68□□□□□ -0.7
U2AF1-209ENST00000475639 ACSM3Q53FZ2 586 aa10.68□□□□□ -0.7
U2AF1-209ENST00000475639 ABHD12BQ7Z5M8 362 aaPredicted RBP10.68□□□□□ -0.7
U2AF1-209ENST00000475639 BPIFB2Q8N4F0 458 aa10.68□□□□□ -0.7
U2AF1-209ENST00000475639 BVESQ8NE79 360 aa10.68□□□□□ -0.7
U2AF1-209ENST00000475639 LIPHQ8WWY8 451 aa10.68□□□□□ -0.7
U2AF1-209ENST00000475639 ACOT11Q8WXI4 607 aaPredicted RBP10.68□□□□□ -0.7
U2AF1-209ENST00000475639 ZMYND19Q96E35 227 aaPredicted RBP10.68□□□□□ -0.7
U2AF1-209ENST00000475639 REEP6Q96HR9 211 aa10.68□□□□□ -0.7
U2AF1-209ENST00000475639 SLC6A18Q96N87 628 aa10.68□□□□□ -0.7
U2AF1-209ENST00000475639 DYNLRB1Q9NP97 96 aa10.68□□□□□ -0.7
U2AF1-209ENST00000475639 TMEM248Q9NWD8 314 aa10.68□□□□□ -0.7
U2AF1-209ENST00000475639 SH3BGRL2Q9UJC5 107 aa10.68□□□□□ -0.7
U2AF1-209ENST00000475639 MCTS1Q9ULC4 181 aaKnown RBP10.68□□□□□ -0.7
U2AF1-209ENST00000475639 SLC6A8P48029 635 aa10.68□□□□□ -0.7
U2AF1-209ENST00000475639 GSK3AP49840 483 aa10.68□□□□□ -0.7
U2AF1-209ENST00000475639 RPS25P62851 125 aaKnown RBP10.68□□□□□ -0.7
U2AF1-209ENST00000475639 RPS26P62854 115 aaKnown RBP10.68□□□□□ -0.7
U2AF1-209ENST00000475639 C3orf38Q5JPI3 329 aa10.68□□□□□ -0.7
U2AF1-209ENST00000475639 RBMXL3Q8N7X1 1067 aaKnown RBP10.68□□□□□ -0.7
U2AF1-209ENST00000475639 PKMYT1Q99640 499 aa10.68□□□□□ -0.7
U2AF1-209ENST00000475639 ATF6BQ99941 703 aa10.68□□□□□ -0.7
U2AF1-209ENST00000475639 FTSJ1Q9UET6 329 aa10.68□□□□□ -0.7
U2AF1-209ENST00000475639 A0A0B4J203 849 aa10.67□□□□□ -0.7
U2AF1-209ENST00000475639 ANTXRLA6NF34 631 aa10.67□□□□□ -0.7
U2AF1-209ENST00000475639 ZAR1LA6NP61 321 aa10.67□□□□□ -0.7
U2AF1-209ENST00000475639 SIGLEC6O43699 453 aa10.67□□□□□ -0.7
U2AF1-209ENST00000475639 GJB3O75712 270 aa10.67□□□□□ -0.7
U2AF1-209ENST00000475639 NCR1O76036 304 aa10.67□□□□□ -0.7
U2AF1-209ENST00000475639 RAB40ALP0C0E4 278 aa10.67□□□□□ -0.7
U2AF1-209ENST00000475639 TACR1P25103 407 aa10.67□□□□□ -0.7
U2AF1-209ENST00000475639 NFYBP25208 207 aa10.67□□□□□ -0.7
U2AF1-209ENST00000475639 GABRA4P48169 554 aa10.67□□□□□ -0.7
U2AF1-209ENST00000475639 DAP3P51398 398 aaKnown RBP10.67□□□□□ -0.7
U2AF1-209ENST00000475639 ZNF805Q5CZA5 627 aa10.67□□□□□ -0.7
U2AF1-209ENST00000475639 PABPC1L2AQ5JQF8 200 aa10.67□□□□□ -0.7
U2AF1-209ENST00000475639 SLC6A19Q695T7 634 aa10.67□□□□□ -0.7
U2AF1-209ENST00000475639 HMGN2P46Q86SG4 172 aa10.67□□□□□ -0.7
U2AF1-209ENST00000475639 GCNT2Q8N0V5 402 aa10.67□□□□□ -0.7
U2AF1-209ENST00000475639 FAM213BQ8TBF2 198 aa10.67□□□□□ -0.7
U2AF1-209ENST00000475639 RAB40AQ8WXH6 277 aa10.67□□□□□ -0.7
U2AF1-209ENST00000475639 ZNF689Q96CS4 500 aaPredicted RBP10.67□□□□□ -0.7
U2AF1-209ENST00000475639 INTS14Q96SY0 518 aa10.67□□□□□ -0.7
U2AF1-209ENST00000475639 GNG12Q9UBI6 72 aa10.67□□□□□ -0.7
U2AF1-209ENST00000475639 CACNA1CQ13936 2221 aa10.67□□□□□ -0.7
U2AF1-209ENST00000475639 OTOFQ9HC10 1997 aa10.67□□□□□ -0.7
U2AF1-209ENST00000475639 NDUFS6O75380 124 aaKnown RBP10.67□□□□□ -0.7
U2AF1-209ENST00000475639 TMEM11P17152 192 aa10.67□□□□□ -0.7
U2AF1-209ENST00000475639 FUT1P19526 365 aa10.67□□□□□ -0.7
U2AF1-209ENST00000475639 CNR1P21554 472 aa10.67□□□□□ -0.7
U2AF1-209ENST00000475639 TRIM23P36406 574 aa10.67□□□□□ -0.7
U2AF1-209ENST00000475639 AKR1C1Q04828 323 aa10.67□□□□□ -0.7
U2AF1-209ENST00000475639 OPCMLQ14982 345 aa10.67□□□□□ -0.7
U2AF1-209ENST00000475639 TP53I3Q53FA7 332 aa10.67□□□□□ -0.7
U2AF1-209ENST00000475639 TMEM201Q5SNT2 666 aa10.67□□□□□ -0.7
U2AF1-209ENST00000475639 USP53Q70EK8 1073 aa10.67□□□□□ -0.7
U2AF1-209ENST00000475639 BCDIN3DQ7Z5W3 292 aaKnown RBP10.67□□□□□ -0.7
U2AF1-209ENST00000475639 CDRT4Q8N9R6 151 aa10.67□□□□□ -0.7
U2AF1-209ENST00000475639 OR4D10Q8NGI6 311 aa10.67□□□□□ -0.7
U2AF1-209ENST00000475639 ELP4Q96EB1 424 aa10.67□□□□□ -0.7
U2AF1-209ENST00000475639 ARSGQ96EG1 525 aa10.67□□□□□ -0.7
U2AF1-209ENST00000475639 SGIP1Q9BQI5 828 aa10.67□□□□□ -0.7
U2AF1-209ENST00000475639 TPPP3Q9BW30 176 aa10.67□□□□□ -0.7
U2AF1-209ENST00000475639 FKRPQ9H9S5 495 aa10.67□□□□□ -0.7
U2AF1-209ENST00000475639 POMT2Q9UKY4 750 aa10.67□□□□□ -0.7
U2AF1-209ENST00000475639 CBY1Q9Y3M2 126 aa10.67□□□□□ -0.7
U2AF1-209ENST00000475639 TRAPPC2LH3BP13 241 aa10.67□□□□□ -0.7
U2AF1-209ENST00000475639 OLFM2O95897 454 aa10.67□□□□□ -0.7
U2AF1-209ENST00000475639 LIPCP11150 499 aa10.67□□□□□ -0.7
U2AF1-209ENST00000475639 CPEP16870 476 aa10.67□□□□□ -0.7
U2AF1-209ENST00000475639 GPX2P18283 190 aa10.67□□□□□ -0.7
U2AF1-209ENST00000475639 GIFP27352 417 aa10.67□□□□□ -0.7
U2AF1-209ENST00000475639 SRYQ05066 204 aa10.67□□□□□ -0.7
U2AF1-209ENST00000475639 ARTNQ5T4W7 220 aa10.67□□□□□ -0.7
U2AF1-209ENST00000475639 AVPI1Q5T686 147 aa10.67□□□□□ -0.7
U2AF1-209ENST00000475639 GAREM2Q75VX8 874 aa10.67□□□□□ -0.7
U2AF1-209ENST00000475639 ZNF765Q7L2R6 523 aa10.67□□□□□ -0.7
U2AF1-209ENST00000475639 TMEM30AQ9NV96 361 aa10.67□□□□□ -0.7
U2AF1-209ENST00000475639 DZANK1Q9NVP4 752 aa10.67□□□□□ -0.7
U2AF1-209ENST00000475639 EHFQ9NZC4 300 aa10.67□□□□□ -0.7
U2AF1-209ENST00000475639 OR7C1O76099 320 aaPredicted RBP10.67□□□□□ -0.7
U2AF1-209ENST00000475639 PPP1R3DO95685 299 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms