RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 SPIN2BQ9BPZ2 258 aa1.94□□□□□ -2.1
ECHDC1-213ENST00000474240 ERP44Q9BS26 406 aa1.94□□□□□ -2.1
ECHDC1-213ENST00000474240 ZSCAN5AQ9BUG6 496 aa1.94□□□□□ -2.1
ECHDC1-213ENST00000474240 LCE3DQ9BYE3 92 aa1.94□□□□□ -2.1
ECHDC1-213ENST00000474240 PLA2G2FQ9BZM2 168 aa1.94□□□□□ -2.1
ECHDC1-213ENST00000474240 DNTTIP1Q9H147 329 aa1.94□□□□□ -2.1
ECHDC1-213ENST00000474240 CD84Q9UIB8 345 aa1.94□□□□□ -2.1
ECHDC1-213ENST00000474240 MMP17Q9ULZ9 603 aa1.94□□□□□ -2.1
ECHDC1-213ENST00000474240 PIGLQ9Y2B2 252 aa1.94□□□□□ -2.1
ECHDC1-213ENST00000474240 TRAV39A0A0B4J263 110 aa1.93□□□□□ -2.1
ECHDC1-213ENST00000474240 A0A1W2PQ67 120 aa1.93□□□□□ -2.1
ECHDC1-213ENST00000474240 TMEM150BA6NC51 233 aa1.93□□□□□ -2.1
ECHDC1-213ENST00000474240 SERPINE3A8MV23 424 aa1.93□□□□□ -2.1
ECHDC1-213ENST00000474240 ZNF208O43345 1280 aa1.93□□□□□ -2.1
ECHDC1-213ENST00000474240 FCMRO60667 390 aa1.93□□□□□ -2.1
ECHDC1-213ENST00000474240 B4GALT2O60909 372 aa1.93□□□□□ -2.1
ECHDC1-213ENST00000474240 SNNO75324 88 aaPredicted RBP1.93□□□□□ -2.1
ECHDC1-213ENST00000474240 SPAG6O75602 509 aa1.93□□□□□ -2.1
ECHDC1-213ENST00000474240 TSPAN12O95859 305 aa1.93□□□□□ -2.1
ECHDC1-213ENST00000474240 GAPDHP04406 335 aaKnown RBP1.93□□□□□ -2.1
ECHDC1-213ENST00000474240 VHLP40337 213 aa1.93□□□□□ -2.1
ECHDC1-213ENST00000474240 CCR8P51685 355 aa1.93□□□□□ -2.1
ECHDC1-213ENST00000474240 SLAQ13239 276 aa1.93□□□□□ -2.1
ECHDC1-213ENST00000474240 PLD1Q13393 1074 aa1.93□□□□□ -2.1
ECHDC1-213ENST00000474240 MADCAM1Q13477 382 aa1.93□□□□□ -2.1
ECHDC1-213ENST00000474240 TTLL9Q3SXZ7 439 aa1.93□□□□□ -2.1
ECHDC1-213ENST00000474240 PDZK1Q5T2W1 519 aa1.93□□□□□ -2.1
ECHDC1-213ENST00000474240 NANOGP8Q6NSW7 305 aa1.93□□□□□ -2.1
ECHDC1-213ENST00000474240 ZSCAN25Q6NSZ9 544 aa1.93□□□□□ -2.1
ECHDC1-213ENST00000474240 C1orf94Q6P1W5 598 aa1.93□□□□□ -2.1
ECHDC1-213ENST00000474240 ENPP6Q6UWR7 440 aa1.93□□□□□ -2.1
ECHDC1-213ENST00000474240 KDM7AQ6ZMT4 941 aa1.93□□□□□ -2.1
ECHDC1-213ENST00000474240 ABHD13Q7L211 337 aa1.93□□□□□ -2.1
ECHDC1-213ENST00000474240 H2BFWTQ7Z2G1 175 aa1.93□□□□□ -2.1
ECHDC1-213ENST00000474240 TRIM69Q86WT6 500 aa1.93□□□□□ -2.1
ECHDC1-213ENST00000474240 ZADH2Q8N4Q0 377 aa1.93□□□□□ -2.1
ECHDC1-213ENST00000474240 ARRDC1Q8N5I2 433 aa1.93□□□□□ -2.1
ECHDC1-213ENST00000474240 Q8N976 141 aa1.93□□□□□ -2.1
ECHDC1-213ENST00000474240 UBALD1Q8TB05 177 aa1.93□□□□□ -2.1
ECHDC1-213ENST00000474240 C10orf35Q96D05 121 aa1.93□□□□□ -2.1
ECHDC1-213ENST00000474240 TRIM44Q96DX7 344 aaPredicted RBP1.93□□□□□ -2.1
ECHDC1-213ENST00000474240 BMFQ96LC9 184 aa1.93□□□□□ -2.1
ECHDC1-213ENST00000474240 SH3GL1Q99961 368 aa1.93□□□□□ -2.1
ECHDC1-213ENST00000474240 NMRAL1Q9HBL8 299 aa1.93□□□□□ -2.1
ECHDC1-213ENST00000474240 ZDHHC4Q9NPG8 344 aa1.93□□□□□ -2.1
ECHDC1-213ENST00000474240 POLE4Q9NR33 117 aa1.93□□□□□ -2.1
ECHDC1-213ENST00000474240 HOXC10Q9NYD6 342 aa1.93□□□□□ -2.1
ECHDC1-213ENST00000474240 BLOC1S6Q9UL45 172 aa1.93□□□□□ -2.1
ECHDC1-213ENST00000474240 PEX16Q9Y5Y5 336 aa1.93□□□□□ -2.1
ECHDC1-213ENST00000474240 FRMPD3Q5JV73 1810 aa1.93□□□□□ -2.1
ECHDC1-213ENST00000474240 MTCL1Q9Y4B5 1905 aaKnown RBP1.93□□□□□ -2.1
ECHDC1-213ENST00000474240 MROH7-TTC4A0A0A0MT08 1334 aa1.92□□□□□ -2.1
ECHDC1-213ENST00000474240 SLIT3O75094 1523 aa1.92□□□□□ -2.1
ECHDC1-213ENST00000474240 A0A0G2JLM5 398 aa1.92□□□□□ -2.1
ECHDC1-213ENST00000474240 FAM240BA0A1B0GVZ2 78 aa1.92□□□□□ -2.1
ECHDC1-213ENST00000474240 SNTNA6NMZ2 147 aa1.92□□□□□ -2.1
ECHDC1-213ENST00000474240 ERVV-1B6SEH8 477 aa1.92□□□□□ -2.1
ECHDC1-213ENST00000474240 C11orf94C9JXX5 98 aa1.92□□□□□ -2.1
ECHDC1-213ENST00000474240 CTDNEP1O95476 244 aa1.92□□□□□ -2.1
ECHDC1-213ENST00000474240 C6orf47O95873 294 aa1.92□□□□□ -2.1
ECHDC1-213ENST00000474240 CALM1P0DP23 149 aa1.92□□□□□ -2.1
ECHDC1-213ENST00000474240 CALM2P0DP24 149 aa1.92□□□□□ -2.1
ECHDC1-213ENST00000474240 CALM3P0DP25 149 aa1.92□□□□□ -2.1
ECHDC1-213ENST00000474240 PSMC3P17980 439 aa1.92□□□□□ -2.1
ECHDC1-213ENST00000474240 GLRA2P23416 452 aa1.92□□□□□ -2.1
ECHDC1-213ENST00000474240 MAGEA8P43361 318 aa1.92□□□□□ -2.1
ECHDC1-213ENST00000474240 NPBWR2P48146 333 aa1.92□□□□□ -2.1
ECHDC1-213ENST00000474240 GSSP48637 474 aa1.92□□□□□ -2.1
ECHDC1-213ENST00000474240 ATP1B3P54709 279 aa1.92□□□□□ -2.1
ECHDC1-213ENST00000474240 FGF8P55075 233 aaPredicted RBP1.92□□□□□ -2.1
ECHDC1-213ENST00000474240 CDH4P55283 916 aa1.92□□□□□ -2.1
ECHDC1-213ENST00000474240 ACTA2P62736 377 aa1.92□□□□□ -2.1
ECHDC1-213ENST00000474240 ACTC1P68032 377 aa1.92□□□□□ -2.1
ECHDC1-213ENST00000474240 PDIA2Q13087 525 aaKnown RBP1.92□□□□□ -2.1
ECHDC1-213ENST00000474240 GPM6BQ13491 265 aa1.92□□□□□ -2.1
ECHDC1-213ENST00000474240 FZD2Q14332 565 aa1.92□□□□□ -2.1
ECHDC1-213ENST00000474240 GUCA2BQ16661 112 aa1.92□□□□□ -2.1
ECHDC1-213ENST00000474240 LCN12Q6JVE5 192 aa1.92□□□□□ -2.1
ECHDC1-213ENST00000474240 TRIM40Q6P9F5 258 aa1.92□□□□□ -2.1
ECHDC1-213ENST00000474240 TMEM179Q6ZVK1 233 aa1.92□□□□□ -2.1
ECHDC1-213ENST00000474240 GET4Q7L5D6 327 aaPredicted RBP1.92□□□□□ -2.1
ECHDC1-213ENST00000474240 EFL1Q7Z2Z2 1120 aaKnown RBP1.92□□□□□ -2.1
ECHDC1-213ENST00000474240 ECHDC2Q86YB7 292 aa1.92□□□□□ -2.1
ECHDC1-213ENST00000474240 PIANPQ8IYJ0 282 aa1.92□□□□□ -2.1
ECHDC1-213ENST00000474240 TTC5Q8N0Z6 440 aa1.92□□□□□ -2.1
ECHDC1-213ENST00000474240 MREGQ8N565 214 aa1.92□□□□□ -2.1
ECHDC1-213ENST00000474240 CYB561D1Q8N8Q1 229 aa1.92□□□□□ -2.1
ECHDC1-213ENST00000474240 ZNF557Q8N988 423 aaPredicted RBP1.92□□□□□ -2.1
ECHDC1-213ENST00000474240 OR52M1Q8NGK5 317 aa1.92□□□□□ -2.1
ECHDC1-213ENST00000474240 OR5D13Q8NGL4 314 aa1.92□□□□□ -2.1
ECHDC1-213ENST00000474240 LKAAEAR1Q8TD35 194 aa1.92□□□□□ -2.1
ECHDC1-213ENST00000474240 SDR42E1Q8WUS8 393 aa1.92□□□□□ -2.1
ECHDC1-213ENST00000474240 GEMIN6Q8WXD5 167 aaKnown RBP1.92□□□□□ -2.1
ECHDC1-213ENST00000474240 DEDD2Q8WXF8 326 aa1.92□□□□□ -2.1
ECHDC1-213ENST00000474240 HSFY1Q96LI6 401 aa1.92□□□□□ -2.1
ECHDC1-213ENST00000474240 MTMR9Q96QG7 549 aa1.92□□□□□ -2.1
ECHDC1-213ENST00000474240 CNN2Q99439 309 aaKnown RBP1.92□□□□□ -2.1
ECHDC1-213ENST00000474240 NDFIP1Q9BT67 221 aa1.92□□□□□ -2.1
ECHDC1-213ENST00000474240 RPP21Q9H633 154 aaKnown RBP1.92□□□□□ -2.1
ECHDC1-213ENST00000474240 SGK2Q9HBY8 427 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms