RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 THUMPD1Q9NXG2 353 aaKnown RBP3.25□□□□□ -1.89
BRCA1-212ENST00000473961 ABCD2Q9UBJ2 740 aa3.25□□□□□ -1.89
BRCA1-212ENST00000473961 KLHL21Q9UJP4 597 aa3.25□□□□□ -1.89
BRCA1-212ENST00000473961 FADS3Q9Y5Q0 445 aa3.25□□□□□ -1.89
BRCA1-212ENST00000473961 IQGAP3Q86VI3 1631 aa3.25□□□□□ -1.89
BRCA1-212ENST00000473961 ANKARQ7Z5J8 1434 aa3.25□□□□□ -1.89
BRCA1-212ENST00000473961 NEURL4Q96JN8 1562 aa3.25□□□□□ -1.89
BRCA1-212ENST00000473961 MROH7Q68CQ1 1323 aa3.24□□□□□ -1.89
BRCA1-212ENST00000473961 MAP3K15Q6ZN16 1313 aa3.24□□□□□ -1.89
BRCA1-212ENST00000473961 SMIM31A0A1B0GVY4 71 aa3.24□□□□□ -1.89
BRCA1-212ENST00000473961 OR5B21A6NL26 309 aa3.24□□□□□ -1.89
BRCA1-212ENST00000473961 VSTM2BA6NLU5 285 aa3.24□□□□□ -1.89
BRCA1-212ENST00000473961 WRBO00258 174 aa3.24□□□□□ -1.89
BRCA1-212ENST00000473961 ABCD4O14678 606 aa3.24□□□□□ -1.89
BRCA1-212ENST00000473961 LSM1O15116 133 aaKnown RBP3.24□□□□□ -1.89
BRCA1-212ENST00000473961 NVLO15381 856 aaKnown RBP3.24□□□□□ -1.89
BRCA1-212ENST00000473961 PSTPIP1O43586 416 aa3.24□□□□□ -1.89
BRCA1-212ENST00000473961 CYTH3O43739 400 aa3.24□□□□□ -1.89
BRCA1-212ENST00000473961 SOX15O60248 233 aa3.24□□□□□ -1.89
BRCA1-212ENST00000473961 ZNF354AO60765 605 aaPredicted RBP3.24□□□□□ -1.89
BRCA1-212ENST00000473961 SERF1AO75920 110 aa3.24□□□□□ -1.89
BRCA1-212ENST00000473961 LGI1O95970 557 aa3.24□□□□□ -1.89
BRCA1-212ENST00000473961 KRT6AP02538 564 aa3.24□□□□□ -1.89
BRCA1-212ENST00000473961 IL2RGP31785 369 aa3.24□□□□□ -1.89
BRCA1-212ENST00000473961 VHLP40337 213 aa3.24□□□□□ -1.89
BRCA1-212ENST00000473961 MDH2P40926 338 aaKnown RBP3.24□□□□□ -1.89
BRCA1-212ENST00000473961 OPRD1P41143 372 aa3.24□□□□□ -1.89
BRCA1-212ENST00000473961 YAP1P46937 504 aaKnown RBP3.24□□□□□ -1.89
BRCA1-212ENST00000473961 GPM6AP51674 278 aa3.24□□□□□ -1.89
BRCA1-212ENST00000473961 PLP1P60201 277 aa3.24□□□□□ -1.89
BRCA1-212ENST00000473961 NCALDP61601 193 aa3.24□□□□□ -1.89
BRCA1-212ENST00000473961 KCNJ2P63252 427 aa3.24□□□□□ -1.89
BRCA1-212ENST00000473961 HPCAP84074 193 aa3.24□□□□□ -1.89
BRCA1-212ENST00000473961 OR5I1Q13606 314 aa3.24□□□□□ -1.89
BRCA1-212ENST00000473961 IL18Q14116 193 aa3.24□□□□□ -1.89
BRCA1-212ENST00000473961 VGLL4Q14135 290 aa3.24□□□□□ -1.89
BRCA1-212ENST00000473961 TGFBIQ15582 683 aa3.24□□□□□ -1.89
BRCA1-212ENST00000473961 VPS26BQ4G0F5 336 aa3.24□□□□□ -1.89
BRCA1-212ENST00000473961 PRR30Q53SZ7 412 aaPredicted RBP3.24□□□□□ -1.89
BRCA1-212ENST00000473961 C11orf71Q6IPW1 123 aa3.24□□□□□ -1.89
BRCA1-212ENST00000473961 C8orf74Q6P047 294 aa3.24□□□□□ -1.89
BRCA1-212ENST00000473961 TMEM53Q6P2H8 277 aa3.24□□□□□ -1.89
BRCA1-212ENST00000473961 ACOT7LQ6ZUV0 252 aa3.24□□□□□ -1.89
BRCA1-212ENST00000473961 MARCH9Q86YJ5 346 aa3.24□□□□□ -1.89
BRCA1-212ENST00000473961 ZNF525Q8N782 197 aa3.24□□□□□ -1.89
BRCA1-212ENST00000473961 ZNF485Q8NCK3 441 aa3.24□□□□□ -1.89
BRCA1-212ENST00000473961 MAPK1IP1LQ8NDC0 245 aa3.24□□□□□ -1.89
BRCA1-212ENST00000473961 OR52H1Q8NGJ2 320 aa3.24□□□□□ -1.89
BRCA1-212ENST00000473961 OR13F1Q8NGS4 319 aa3.24□□□□□ -1.89
BRCA1-212ENST00000473961 PAQR8Q8TEZ7 354 aa3.24□□□□□ -1.89
BRCA1-212ENST00000473961 FAM222BQ8WU58 562 aa3.24□□□□□ -1.89
BRCA1-212ENST00000473961 DNAJA4Q8WW22 397 aaPredicted RBP3.24□□□□□ -1.89
BRCA1-212ENST00000473961 SLC38A4Q969I6 547 aa3.24□□□□□ -1.89
BRCA1-212ENST00000473961 NEIL2Q969S2 332 aa3.24□□□□□ -1.89
BRCA1-212ENST00000473961 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.24□□□□□ -1.89
BRCA1-212ENST00000473961 HAVCR1Q96D42 359 aa3.24□□□□□ -1.89
BRCA1-212ENST00000473961 ZNF578Q96N58 590 aaPredicted RBP3.24□□□□□ -1.89
BRCA1-212ENST00000473961 ZNF317Q96PQ6 595 aaPredicted RBP3.24□□□□□ -1.89
BRCA1-212ENST00000473961 XPO6Q96QU8 1125 aaKnown RBP3.24□□□□□ -1.89
BRCA1-212ENST00000473961 OSBPL10Q9BXB5 764 aa3.24□□□□□ -1.89
BRCA1-212ENST00000473961 MFFQ9GZY8 342 aa3.24□□□□□ -1.89
BRCA1-212ENST00000473961 GFRA4Q9GZZ7 299 aa3.24□□□□□ -1.89
BRCA1-212ENST00000473961 Q9H3A6 140 aa3.24□□□□□ -1.89
BRCA1-212ENST00000473961 PLGRKTQ9HBL7 147 aa3.24□□□□□ -1.89
BRCA1-212ENST00000473961 FAIMQ9NVQ4 179 aa3.24□□□□□ -1.89
BRCA1-212ENST00000473961 RHBDL2Q9NX52 303 aa3.24□□□□□ -1.89
BRCA1-212ENST00000473961 UBAP1Q9NZ09 502 aa3.24□□□□□ -1.89
BRCA1-212ENST00000473961 BTNL2Q9UIR0 455 aa3.24□□□□□ -1.89
BRCA1-212ENST00000473961 NUP50Q9UKX7 468 aa3.24□□□□□ -1.89
BRCA1-212ENST00000473961 GUCA1BQ9UMX6 200 aa3.24□□□□□ -1.89
BRCA1-212ENST00000473961 SNX12Q9UMY4 172 aa3.24□□□□□ -1.89
BRCA1-212ENST00000473961 CSAG2Q9Y5P2 127 aa3.24□□□□□ -1.89
BRCA1-212ENST00000473961 BCL9O00512 1426 aa3.24□□□□□ -1.89
BRCA1-212ENST00000473961 CDC42BPGQ6DT37 1551 aa3.24□□□□□ -1.89
BRCA1-212ENST00000473961 SAMD9LQ8IVG5 1584 aa3.24□□□□□ -1.89
BRCA1-212ENST00000473961 BICRAQ9NZM4 1560 aa3.24□□□□□ -1.89
BRCA1-212ENST00000473961 INO80Q9ULG1 1556 aaPredicted RBP3.24□□□□□ -1.89
BRCA1-212ENST00000473961 PCNX3Q9H6A9 2034 aa3.24□□□□□ -1.89
BRCA1-212ENST00000473961 ATP7BP35670 1465 aa3.23□□□□□ -1.89
BRCA1-212ENST00000473961 IGHV1OR15-1A0A075B7D0 117 aa3.23□□□□□ -1.89
BRCA1-212ENST00000473961 A0A1W2PPE3 182 aa3.23□□□□□ -1.89
BRCA1-212ENST00000473961 KRTAP16-1A8MUX0 517 aa3.23□□□□□ -1.89
BRCA1-212ENST00000473961 SPECC1L-ADORA2AF8WAN1 911 aa3.23□□□□□ -1.89
BRCA1-212ENST00000473961 H0YIV9 168 aa3.23□□□□□ -1.89
BRCA1-212ENST00000473961 DCTN6O00399 190 aa3.23□□□□□ -1.89
BRCA1-212ENST00000473961 LATO43561 262 aa3.23□□□□□ -1.89
BRCA1-212ENST00000473961 TMEM50AO95807 157 aa3.23□□□□□ -1.89
BRCA1-212ENST00000473961 MMP1P03956 469 aa3.23□□□□□ -1.89
BRCA1-212ENST00000473961 SEMG1P04279 462 aa3.23□□□□□ -1.89
BRCA1-212ENST00000473961 SERPIND1P05546 499 aa3.23□□□□□ -1.89
BRCA1-212ENST00000473961 KRT16P08779 473 aa3.23□□□□□ -1.89
BRCA1-212ENST00000473961 OR8U8P0C7N1 319 aa3.23□□□□□ -1.89
BRCA1-212ENST00000473961 PABPC4LP0CB38 370 aaKnown RBP3.23□□□□□ -1.89
BRCA1-212ENST00000473961 RRM2P31350 389 aa3.23□□□□□ -1.89
BRCA1-212ENST00000473961 OTX1P32242 354 aaPredicted RBP3.23□□□□□ -1.89
BRCA1-212ENST00000473961 SHMT2P34897 504 aa3.23□□□□□ -1.89
BRCA1-212ENST00000473961 PTGDSP41222 190 aa3.23□□□□□ -1.89
BRCA1-212ENST00000473961 KPNA2P52292 529 aaKnown RBP3.23□□□□□ -1.89
BRCA1-212ENST00000473961 GBE1Q04446 702 aa3.23□□□□□ -1.89
BRCA1-212ENST00000473961 SPAG1Q07617 926 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms