RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 NDUFB2O95178 105 aa10.93□□□□□ -0.66
DDX56-209ENST00000473924 ITGA5P08648 1049 aa10.93□□□□□ -0.66
DDX56-209ENST00000473924 SSTR2P30874 369 aa10.93□□□□□ -0.66
DDX56-209ENST00000473924 HOXC12P31275 282 aa10.93□□□□□ -0.66
DDX56-209ENST00000473924 LIMS1P48059 325 aa10.93□□□□□ -0.66
DDX56-209ENST00000473924 CSNK1A1P48729 337 aa10.93□□□□□ -0.66
DDX56-209ENST00000473924 FOXG1P55316 489 aaPredicted RBP10.93□□□□□ -0.66
DDX56-209ENST00000473924 CLRN1P58418 232 aa10.93□□□□□ -0.66
DDX56-209ENST00000473924 TLE4Q04727 773 aa10.93□□□□□ -0.66
DDX56-209ENST00000473924 TOP3AQ13472 1001 aaPredicted RBP10.93□□□□□ -0.66
DDX56-209ENST00000473924 ACKR1Q16570 336 aa10.93□□□□□ -0.66
DDX56-209ENST00000473924 MICAQ29983 383 aa10.93□□□□□ -0.66
DDX56-209ENST00000473924 OR7E24Q6IFN5 339 aa10.93□□□□□ -0.66
DDX56-209ENST00000473924 NHLRC1Q6VVB1 395 aa10.93□□□□□ -0.66
DDX56-209ENST00000473924 ZER1Q7Z7L7 766 aa10.93□□□□□ -0.66
DDX56-209ENST00000473924 WFDC8Q8IUA0 241 aa10.93□□□□□ -0.66
DDX56-209ENST00000473924 C20orf196Q8IYI0 205 aa10.93□□□□□ -0.66
DDX56-209ENST00000473924 PAPD5Q8NDF8 572 aaKnown RBP10.93□□□□□ -0.66
DDX56-209ENST00000473924 OR4C15Q8NGM1 316 aa10.93□□□□□ -0.66
DDX56-209ENST00000473924 HSD17B8Q92506 261 aa10.93□□□□□ -0.66
DDX56-209ENST00000473924 UTP4Q969X6 686 aaKnown RBP10.93□□□□□ -0.66
DDX56-209ENST00000473924 MUCL1Q96DR8 90 aa10.93□□□□□ -0.66
DDX56-209ENST00000473924 SLC25A44Q96H78 314 aaPredicted RBP10.93□□□□□ -0.66
DDX56-209ENST00000473924 LRR1Q96L50 414 aa10.93□□□□□ -0.66
DDX56-209ENST00000473924 RAB3IPQ96QF0 476 aaPredicted RBP10.93□□□□□ -0.66
DDX56-209ENST00000473924 POLDIP3Q9BY77 421 aaKnown RBP10.93□□□□□ -0.66
DDX56-209ENST00000473924 ULBP2Q9BZM5 246 aa10.93□□□□□ -0.66
DDX56-209ENST00000473924 TXNIPQ9H3M7 391 aa10.93□□□□□ -0.66
DDX56-209ENST00000473924 CRLF2Q9HC73 371 aa10.93□□□□□ -0.66
DDX56-209ENST00000473924 VNN3Q9NY84 501 aa10.93□□□□□ -0.66
DDX56-209ENST00000473924 STX18Q9P2W9 335 aaKnown RBP10.93□□□□□ -0.66
DDX56-209ENST00000473924 SIGLEC7Q9Y286 467 aa10.93□□□□□ -0.66
DDX56-209ENST00000473924 ASH1LQ9NR48 2969 aaKnown RBP10.92□□□□□ -0.66
DDX56-209ENST00000473924 OR5H1A6NKK0 313 aa10.92□□□□□ -0.66
DDX56-209ENST00000473924 PDLIM1O00151 329 aa10.92□□□□□ -0.66
DDX56-209ENST00000473924 TIPRLO75663 272 aa10.92□□□□□ -0.66
DDX56-209ENST00000473924 IGHG1P01857 330 aa10.92□□□□□ -0.66
DDX56-209ENST00000473924 FPR3P25089 353 aa10.92□□□□□ -0.66
DDX56-209ENST00000473924 ARHGDIAP52565 204 aa10.92□□□□□ -0.66
DDX56-209ENST00000473924 SH3BGRP55822 239 aaPredicted RBP10.92□□□□□ -0.66
DDX56-209ENST00000473924 GABPB1Q06547 395 aaPredicted RBP10.92□□□□□ -0.66
DDX56-209ENST00000473924 CCNIQ14094 377 aa10.92□□□□□ -0.66
DDX56-209ENST00000473924 GK3PQ14409 553 aa10.92□□□□□ -0.66
DDX56-209ENST00000473924 TAB1Q15750 504 aa10.92□□□□□ -0.66
DDX56-209ENST00000473924 GABRA6Q16445 453 aa10.92□□□□□ -0.66
DDX56-209ENST00000473924 CEACAM16Q2WEN9 425 aa10.92□□□□□ -0.66
DDX56-209ENST00000473924 TIMM23BQ5SRD1 257 aa10.92□□□□□ -0.66
DDX56-209ENST00000473924 C1orf94Q6P1W5 598 aa10.92□□□□□ -0.66
DDX56-209ENST00000473924 PGBD2Q6P3X8 592 aa10.92□□□□□ -0.66
DDX56-209ENST00000473924 YTHDF3Q7Z739 585 aaKnown RBP10.92□□□□□ -0.66
DDX56-209ENST00000473924 TMEM200AQ86VY9 491 aa10.92□□□□□ -0.66
DDX56-209ENST00000473924 P2RY8Q86VZ1 359 aa10.92□□□□□ -0.66
DDX56-209ENST00000473924 ZNF295-AS1Q8N0V1 137 aa10.92□□□□□ -0.66
DDX56-209ENST00000473924 C1orf162Q8NEQ5 155 aaPredicted RBP10.92□□□□□ -0.66
DDX56-209ENST00000473924 OR9Q2Q8NGE9 314 aa10.92□□□□□ -0.66
DDX56-209ENST00000473924 FANK1Q8TC84 345 aa10.92□□□□□ -0.66
DDX56-209ENST00000473924 ASB10Q8WXI3 467 aa10.92□□□□□ -0.66
DDX56-209ENST00000473924 SLCO4A1Q96BD0 722 aa10.92□□□□□ -0.66
DDX56-209ENST00000473924 C14orf79Q96F83 325 aa10.92□□□□□ -0.66
DDX56-209ENST00000473924 GPA33Q99795 319 aa10.92□□□□□ -0.66
DDX56-209ENST00000473924 KATNB1Q9BVA0 655 aa10.92□□□□□ -0.66
DDX56-209ENST00000473924 GPR35Q9HC97 309 aa10.92□□□□□ -0.66
DDX56-209ENST00000473924 NGBQ9NPG2 151 aa10.92□□□□□ -0.66
DDX56-209ENST00000473924 GRHPRQ9UBQ7 328 aa10.92□□□□□ -0.66
DDX56-209ENST00000473924 ZNF346Q9UL40 294 aaKnown RBP10.92□□□□□ -0.66
DDX56-209ENST00000473924 AP4S1Q9Y587 144 aa10.92□□□□□ -0.66
DDX56-209ENST00000473924 ADGRG4Q8IZF6 3080 aa10.92□□□□□ -0.66
DDX56-209ENST00000473924 PKDREJQ9NTG1 2253 aa10.91□□□□□ -0.66
DDX56-209ENST00000473924 NPIPB13A6NJU9 1138 aa10.91□□□□□ -0.66
DDX56-209ENST00000473924 A6NNC1 897 aa10.91□□□□□ -0.66
DDX56-209ENST00000473924 NPIPB4C9JG80 1138 aa10.91□□□□□ -0.66
DDX56-209ENST00000473924 RPL36A-HNRNPH2H7BZ11 118 aa10.91□□□□□ -0.66
DDX56-209ENST00000473924 KLF4O43474 513 aa10.91□□□□□ -0.66
DDX56-209ENST00000473924 PTP4A3O75365 173 aa10.91□□□□□ -0.66
DDX56-209ENST00000473924 DEAF1O75398 565 aaPredicted RBP10.91□□□□□ -0.66
DDX56-209ENST00000473924 GASTP01350 101 aa10.91□□□□□ -0.66
DDX56-209ENST00000473924 THBDP07204 575 aa10.91□□□□□ -0.66
DDX56-209ENST00000473924 PGA4P0DJD7 388 aa10.91□□□□□ -0.66
DDX56-209ENST00000473924 PGA3P0DJD8 388 aa10.91□□□□□ -0.66
DDX56-209ENST00000473924 ACADSP16219 412 aa10.91□□□□□ -0.66
DDX56-209ENST00000473924 ACVR1BP36896 505 aa10.91□□□□□ -0.66
DDX56-209ENST00000473924 GSSP48637 474 aa10.91□□□□□ -0.66
DDX56-209ENST00000473924 IST1P53990 364 aa10.91□□□□□ -0.66
DDX56-209ENST00000473924 RPL27P61353 136 aaKnown RBP10.91□□□□□ -0.66
DDX56-209ENST00000473924 ERVK-25P63136 954 aa10.91□□□□□ -0.66
DDX56-209ENST00000473924 TSPAN31Q12999 210 aa10.91□□□□□ -0.66
DDX56-209ENST00000473924 FHL1Q13642 323 aa10.91□□□□□ -0.66
DDX56-209ENST00000473924 DAZAP2Q15038 168 aaPredicted RBP10.91□□□□□ -0.66
DDX56-209ENST00000473924 PPA1Q15181 289 aa10.91□□□□□ -0.66
DDX56-209ENST00000473924 PHYHD1Q5SRE7 291 aa10.91□□□□□ -0.66
DDX56-209ENST00000473924 FAM205BPQ63HN1 556 aa10.91□□□□□ -0.66
DDX56-209ENST00000473924 SMARCD3Q6STE5 483 aa10.91□□□□□ -0.66
DDX56-209ENST00000473924 KLHL24Q6TFL4 600 aa10.91□□□□□ -0.66
DDX56-209ENST00000473924 C22orf34Q6ZV56 151 aa10.91□□□□□ -0.66
DDX56-209ENST00000473924 LINGO2Q7L985 606 aa10.91□□□□□ -0.66
DDX56-209ENST00000473924 WDFY1Q8IWB7 410 aa10.91□□□□□ -0.66
DDX56-209ENST00000473924 C17orf78Q8N4C9 275 aa10.91□□□□□ -0.66
DDX56-209ENST00000473924 LRRC75AQ8NAA5 344 aa10.91□□□□□ -0.66
DDX56-209ENST00000473924 SYT14Q8NB59 555 aa10.91□□□□□ -0.66
DDX56-209ENST00000473924 AQP11Q8NBQ7 271 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms